Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for pabpc1l

Gene Name Gene ID Reads Annotation
pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]










Genes with expression patterns similar to pabpc1l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 3 - - - 1.000 - - 1.000 - 1.000 poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
2. CU468142.1 CU468142.1 6 1.798 - - - 1.000 - - 0.798 - -
3. SGSM1_1 SGSM1_1 40 1.758 - - - 1.000 - - 0.758 - -
4. FNDC7_1 FNDC7_1 3 1.722 - - - - - - 0.798 - 0.924
5. zgc:158654 19 1.706 - - - 1.000 - - 0.706 - - zgc:158654, transcript variant X1
6. CR391967.1 CR391967.1 135 1.552 - - - 0.754 - - 0.798 - -
7. si:ch211-15p9.2 ENSDARG00000062241 1 1 - - - 1.000 - - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
8. BX088646.1 BX088646.1 34 1 - - - - - - 1.000 - -
9. ONECUT2 ENSDARG00000090387 8 1 - - - 1.000 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
10. si:ch211-198o19.2 si:ch211-198o19.2 0 1 - - - 1.000 - - - - -
11. gpr155a ENSDARG00000090804 27 1 - - - 1.000 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
12. inpp5k inpp5k 2 1 - - - 1.000 - - - - -
13. ryr2b ENSDARG00000003706 6 1 - - - 1.000 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
14. BX321875.3 ENSDARG00000112569 24 1 - - - 1.000 - - - - -
15. zgc:114037_5 6 1 - - - 1.000 - - - - - zgc:114037
16. znhit3 ENSDARG00000023950 61 1 - - - - - - 1.000 - - zinc finger, HIT-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1114]
17. CABZ01060030.1 ENSDARG00000106579 55 1 - - - 1.000 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
18. guca1c ENSDARG00000030758 9 1 - - - 1.000 - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
19. dcst2 ENSDARG00000088693 1 1 - - - 1.000 - - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
20. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - 1.000 - - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
21. arhgap23b ENSDARG00000026840 6 1 - - - 1.000 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
22. mtp 1 1 - - - 1.000 - - - - - microsomal triglyceride transfer protein
23. bard1 ENSDARG00000076733 40 1 - - - 1.000 - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
24. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - - 1.000 - - - - -
25. top3b ENSDARG00000027586 8 1 - - - 1.000 - - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
26. FMNL1 FMNL1 7 1 - - - 1.000 - - - - -
27. GM2A ENSDARG00000088439 55 1 - - - 1.000 - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
28. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
29. BX005421.6 BX005421.6 4 1 - - - 1.000 - - - - -
30. U1_27 U1_27 0 1 - - - 1.000 - - - - -
31. U1_24 U1_24 0 1 - - - 1.000 - - - - -
32. C7H19orf12_1 C7H19orf12_1 20 1 - - - - - - 1.000 - -
33. MYL2 MYL2 7 1 - - - 1.000 - - - - -
34. BX005442.2 ENSDARG00000111949 0 1 - - - 1.000 - - - - -
35. cd44a ENSDARG00000087863 4 1 - - - 1.000 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
36. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
37. ighv14-1 ENSDARG00000096418 17 1 - - - 1.000 - - - - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
38. CU181898.1 CU181898.1 0 1 - - - 1.000 - - - - -
39. tcap ENSDARG00000007344 276 1 - - - - - - - - 1.000 titin-cap (telethonin) [Source:ZFIN;Acc:ZDB-GENE-070501-5]
40. FBXO16 ENSDARG00000033949 10 1 - - - - - - 1.000 - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
41. Metazoa_SRP_4 Metazoa_SRP_4 0 1 - - - 1.000 - - - - -
42. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
43. CR450840.2 CR450840.2 1 1 - - - 1.000 - - - - -
44. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 - - - 1.000 - - - - -
45. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - 1.000 - - - - -
46. PLA2G4C_1 PLA2G4C_1 2 1 - - - 1.000 - - - - -
47. IMPG2_1 IMPG2_1 2 1 - - - 1.000 - - - - -
48. htra3a ENSDARG00000052895 28 1 - - - 1.000 - - - - - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
49. TRPC7 TRPC7 1 1 - - - 1.000 - - - - -
50. EXD1 ENSDARG00000098669 27 1 - - - 1.000 - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
51. scpp1 ENSDARG00000090416 1 1 - - - 1.000 - - - - - secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]
52. CU302326.1 CU302326.1 1 1 - - - 1.000 - - - - -
53. CABZ01080134.1 CABZ01080134.1 2 1 - - - 1.000 - - - - -
54. zpcx ENSDARG00000059252, ENSDARG00000111002 33 1 - - - 1.000 - - - - - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
55. vtg3 ENSDARG00000016448 8 1 - - - 1.000 - - - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
56. si:ch211-131e11.15 si:ch211-131e11.15 0 1 - - - 1.000 - - - - -
57. si:dkeyp-33c10.5 11 1 - - - 1.000 - - - - - si:dkeyp-33c10.5, transcript variant X2
58. bend5 ENSDARG00000075624 10 1 - - - 1.000 - - - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
59. si:dkey-203c4.2 si:dkey-203c4.2 4 1 - - - 1.000 - - - - -
60. si:ch73-21k16.5 ENSDARG00000078770 7 1 - - - 1.000 - - - - - si:ch73-21k16.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8374]
61. si:dkey-70p6.1 ENSDARG00000092039, ENSDARG00000114631 19 1 - - - 1.000 - - - - - si:dkey-70p6.1 [Source:ZFIN;Acc:ZDB-GENE-040724-140]
62. CABZ01016604.1 CABZ01016604.1 12 1 - - - 1.000 - - - - -
63. BX470196.1 BX470196.1 9 1 - - - 1.000 - - - - -
64. adcy9 ENSDARG00000100869 1 1 - - - 1.000 - - - - - adenylate cyclase 9 [Source:ZFIN;Acc:ZDB-GENE-050208-455]
65. CU856520.1 ENSDARG00000098941 2 1 - - - 1.000 - - - - -
66. U1_1 U1_1 0 1 - - - 1.000 - - - - -
67. STX1A ENSDARG00000058994 0 1 - - - 1.000 - - - - - syntaxin 1A (brain) [Source:ZFIN;Acc:ZDB-GENE-100802-1]
68. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - 1.000 - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
69. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 1 - - - 1.000 - - - - -
70. 5S_rRNA_22 5S_rRNA_22 45 1 - - - - - - 1.000 - -
71. mcm5_1 ENSDARG00000019507 10 1 - - - 1.000 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
72. si:dkeyp-52c3.1 3 1 - - - 1.000 - - - - - si:dkeyp-52c3.1, transcript variant X1
73. U1_43 U1_43 0 1 - - - 1.000 - - - - -
74. BX465203.1 ENSDARG00000113985 8 1 - - - 1.000 - - - - -
75. CREBBP CREBBP 8 1 - - - 1.000 - - - - -
76. BX664622.3 BX664622.3 42 1 - - - - - - 1.000 - -
77. arih1l ENSDARG00000036870, ENSDARG00000112965 82 1 - - - - - - 1.000 - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
78. TRAF2 TRAF2 13 1 - - - 1.000 - - - - -
79. tlr5a ENSDARG00000044415 3 1 - - - 1.000 - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
80. si:dkey-247i3.4 si:dkey-247i3.4 89 1 - - - - - - 1.000 - -
81. hcrt ENSDARG00000070932 4 1 - - - 1.000 - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
82. SSTR2 SSTR2 12 1 - - - 1.000 - - - - -
83. FBXO15 ENSDARG00000016897 4 1 - - - 1.000 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
84. arvcfa ENSDARG00000074329 53 0.98 - - - - - - 0.980 - - ARVCF, delta catenin family member a [Source:ZFIN;Acc:ZDB-GENE-091113-43]
85. zgc:136493 ENSDARG00000029259 132 0.96 - - - - - - 0.960 - - zgc:136493 [Source:ZFIN;Acc:ZDB-GENE-060512-216]
86. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 0.958 - - - - - - 0.958 - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
87. crygn1 ENSDARG00000102129 23 0.956 - - - - - - 0.956 - - crystallin, gamma N1 [Source:ZFIN;Acc:ZDB-GENE-050225-1]
88. CABZ01072853.1 CABZ01072853.1 35 0.947 - - - 0.947 - - - - -
89. zgc:193690 34 0.942 - - - - - - 0.942 - - zgc:193690
90. C18H15orf26 C18H15orf26 36 0.942 - - - - - - 0.942 - -
91. rpph1 33 0.942 - - - - - - 0.942 - - ribonuclease P RNA component H1
92. C18H3orf33 ENSDARG00000040582 77 0.932 - - - - - - 0.932 - - c18h3orf33 homolog (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-061121-2]
93. si:dkey-114b16.5 si:dkey-114b16.5 5 0.924 - - - 0.924 - - - - -
94. tnxb 30 0.924 - - - - - - - - 0.924 tenascin XB
95. KCNJ12 KCNJ12 17 0.924 - - - - - - - - 0.924
96. CU655961.5 CU655961.5 2 0.924 - - - - - - - - 0.924
97. CABZ01059392.1 ENSDARG00000063108 3 0.924 - - - - - - - - 0.924 uncharacterized LOC100334305 [Source:NCBI gene;Acc:100334305]
98. si:dkeyp-104f11.3 si:dkeyp-104f11.3 3 0.924 - - - 0.924 - - - - -
99. cln5 ENSDARG00000076339 1 0.924 - - - - - - - - 0.924 CLN5, intracellular trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060908-1]
100. MFAP4_3 MFAP4_3 7 0.924 - - - - - - - - 0.924

There are 338 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA