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Results for pabpc1b

Gene Name Gene ID Reads Annotation
pabpc1b ENSDARG00000021140 5729 poly A binding protein, cytoplasmic 1 b [Source:ZFIN;Acc:ZDB-GENE-050308-1]










Genes with expression patterns similar to pabpc1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. pabpc1b ENSDARG00000021140 5729 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 poly A binding protein, cytoplasmic 1 b [Source:ZFIN;Acc:ZDB-GENE-050308-1]
2. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 2.311 - 0.799 - - - 0.770 0.742 - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
3. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 2.196 - 0.731 0.754 - - - - - 0.711 regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
4. rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 2.15 - - - - 0.709 - 0.706 - 0.735 regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]
5. hrsp12 3981 1.755 - - 0.814 - - 0.941 - - - heat-responsive protein 12, transcript variant 1
6. gdi2 ENSDARG00000005451, ENSDARG00000113039 11258 1.748 - - - - - 0.923 0.825 - - GDP dissociation inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2485]
7. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 1.746 - 0.797 - - - 0.949 - - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
8. fahd2a ENSDARG00000103759 9581 1.701 - - 0.763 - - 0.938 - - - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
9. PLCXD1_4 PLCXD1_4 3673 1.688 - - 0.737 - - 0.951 - - -
10. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 1.683 - 0.761 - - - 0.922 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
11. atf4b2 atf4b2 4734 1.678 - - - - - 0.922 0.756 - -
12. ucp2 ENSDARG00000043154 2921 1.676 - - - - - 0.944 - - 0.732 uncoupling protein 2 [Source:ZFIN;Acc:ZDB-GENE-990708-8]
13. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 1.674 - 0.751 - - - 0.923 - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
14. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 1.668 - - 0.737 - - 0.931 - - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
15. acsf2 ENSDARG00000061201 4413 1.662 - - 0.717 - - 0.945 - - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
16. nhsl1b ENSDARG00000042627 3697 1.661 - 0.743 - - - 0.918 - - - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
17. slc1a5 ENSDARG00000099186 7580 1.65 - - - - - 0.928 0.722 - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
18. mcm2 ENSDARG00000102798 8148 1.638 - - - - - 0.930 0.708 - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
19. frmd8 ENSDARG00000073696 2661 1.633 - 0.747 - - - 0.886 - - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
20. fam50a ENSDARG00000024895 3020 1.626 - 0.703 - - - 0.923 - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
21. bcap31 ENSDARG00000044972 8708 1.621 - - - - - 0.902 0.719 - - B cell receptor associated protein 31 [Source:ZFIN;Acc:ZDB-GENE-030616-63]
22. APOB_1 APOB_1 2217 1.61 - 0.809 0.801 - - - - - -
23. cyb5r3 ENSDARG00000005891 4440 1.599 - - 0.874 - - - - - 0.725 cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
24. CFI 3801 1.589 - 0.796 - - - - - - 0.793 complement factor I
25. ssu72 ENSDARG00000031216 2350 1.575 - 0.866 - - - - 0.709 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
26. brd4 ENSDARG00000078904 5367 1.562 - 0.788 - - - - 0.774 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
27. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 1.56 - 0.785 - - - - 0.775 - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
28. gapdhs ENSDARG00000039914 8760 1.553 - 0.706 - - - 0.847 - - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
29. zgc:55512 zgc:55512 4436 1.544 - 0.745 - - - - 0.799 - -
30. slc26a5 ENSDARG00000022424 976 1.543 - 0.762 0.781 - - - - - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]
31. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 1.54 - - 0.824 - - - - - 0.716 glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
32. fam89a ENSDARG00000079979 4375 1.529 - 0.822 - - - - 0.707 - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
33. svilb ENSDARG00000014651 4449 1.521 - 0.800 0.721 - - - - - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
34. rhoac ENSDARG00000116058 9256 1.521 - - - - - 0.772 0.749 - - ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
35. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.513 - - - - - 0.754 0.759 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
36. si:dkey-184d2.3 si:dkey-184d2.3 1536 1.496 - 0.714 - - - - 0.782 - -
37. dap1b ENSDARG00000086842, ENSDARG00000109678 2464 1.49 - 0.782 - - - - 0.708 - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
38. col5a1 ENSDARG00000012593 24177 1.483 - - - - - 0.743 0.740 - - procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6]
39. lbr ENSDARG00000014013 4835 1.473 - 0.735 - - - - 0.738 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
40. sdc4 ENSDARG00000059906 10105 1.471 - 0.716 - - - - 0.755 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
41. ppp2r1a ppp2r1a 11291 1.468 - 0.719 - - - - 0.749 - -
42. slc38a5b ENSDARG00000014587 8461 1.468 - 0.706 - - - - 0.762 - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
43. renbp ENSDARG00000008931 1848 1.466 - 0.714 0.752 - - - - - - renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
44. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.46 - - 0.757 0.703 - - - - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
45. xkrx ENSDARG00000044011 1788 1.445 - 0.721 - - - - 0.724 - - XK related X-linked [Source:ZFIN;Acc:ZDB-GENE-041114-108]
46. csnk1g2a ENSDARG00000005458 2917 1.442 - 0.709 - - - - 0.733 - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
47. nipblb ENSDARG00000061052 6109 1.44 - 0.713 - - - - 0.727 - - nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
48. ppp1cbl ENSDARG00000102012 2301 1.434 - 0.702 - - - - 0.732 - - protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
49. dgkaa ENSDARG00000060626, ENSDARG00000110977 2315 1.413 - 0.703 - 0.710 - - - - - diacylglycerol kinase, alpha a [Source:ZFIN;Acc:ZDB-GENE-060616-305]
50. slc7a8a ENSDARG00000075831 2987 0.961 - - - - - 0.961 - - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
51. CABZ01034848.1 CABZ01034848.1 9936 0.96 - - - - - 0.960 - - -
52. SLC13A4 ENSDARG00000059053 2114 0.96 - - - - - 0.960 - - - solute carrier family 13 (sodium/sulfate symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-71]
53. capn2a ENSDARG00000091699 5924 0.955 - - - - - 0.955 - - - calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
54. s100v2 ENSDARG00000070702 8645 0.953 - - - - - 0.953 - - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
55. esyt2a ENSDARG00000030824 1907 0.952 - - - - - 0.952 - - - extended synaptotagmin-like protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-588]
56. nccrp1 ENSDARG00000035326, ENSDARG00000113175 11385 0.95 - - - - - 0.950 - - - non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
57. serpinf2b ENSDARG00000061383 3859 0.949 - - - - - 0.949 - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b [Source:ZFIN;Acc:ZDB-GENE-061215-114]
58. ptgs1 ENSDARG00000052148 2443 0.943 - - - - - 0.943 - - - prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
59. ppargc1b ENSDARG00000101569 3452 0.943 - - - - - 0.943 - - - peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
60. mt2 ENSDARG00000041623, ENSDARG00000113583 15333 0.943 - - - - - 0.943 - - - metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
61. txndc5 ENSDARG00000009342 5387 0.941 - - - - - 0.941 - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
62. c5 ENSDARG00000021004 3536 0.939 - - - - - 0.939 - - - complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
63. phyhd1 ENSDARG00000029905 1394 0.938 - - - - - 0.938 - - - phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]
64. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 0.937 - - - - - 0.937 - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
65. pitx2 ENSDARG00000036194 2279 0.937 - - - - - 0.937 - - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
66. ube2g2 ENSDARG00000025404 1774 0.935 - - - - - 0.935 - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
67. agpat4 ENSDARG00000069044 4487 0.934 - - - - - 0.934 - - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
68. kifc3 ENSDARG00000054978 1220 0.933 - - - - - 0.933 - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
69. si:dkey-42i9.4 ENSDARG00000008049 4752 0.933 - - - - - 0.933 - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
70. acp5a ENSDARG00000019763, ENSDARG00000111996 7752 0.933 - - - - - 0.933 - - - acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
71. alpi.1 ENSDARG00000015273 1712 0.932 - - - - - 0.932 - - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
72. kif13ba ENSDARG00000079731 1726 0.932 - - - - - 0.932 - - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
73. ndrg2 ENSDARG00000011170 11442 0.932 - - - - - 0.932 - - - NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
74. C19H1orf51 C19H1orf51 1776 0.932 - - - - - 0.932 - - -
75. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 0.931 - - - - - 0.931 - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
76. emc8 ENSDARG00000017093 1947 0.931 - - - - - 0.931 - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
77. fam3c ENSDARG00000056152 3833 0.931 - - - - - 0.931 - - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
78. larp1b ENSDARG00000061169 9939 0.931 - - - - - 0.931 - - - La ribonucleoprotein domain family, member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]
79. tpd52l2a ENSDARG00000027154 4359 0.93 - - - - - 0.930 - - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
80. sufu ENSDARG00000056801 1543 0.93 - - - - - 0.930 - - - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
81. ARHGAP35 2409 0.929 - - - - - 0.929 - - - Rho GTPase activating protein 35b, transcript variant X2
82. MIB1 ENSDARG00000102184 3285 0.929 - - - - - 0.929 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
83. si:ch211-286b5.5 ENSDARG00000096661 3136 0.928 - - - - - 0.928 - - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
84. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 0.927 - - - - - 0.927 - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
85. ufm1 ENSDARG00000043857 4152 0.927 - - - - - 0.927 - - - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
86. myo1c myo1c 4978 0.927 - - - - - 0.927 - - -
87. lima1 lima1 4760 0.927 - - - - - 0.927 - - -
88. hm13 ENSDARG00000037846 5019 0.927 - - - - - 0.927 - - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
89. vps13a ENSDARG00000039225 3151 0.927 - - - - - 0.927 - - - vacuolar protein sorting 13 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030926-1]
90. thoc1 ENSDARG00000088246 1718 0.927 - - - - - 0.927 - - - THO complex 1 [Source:ZFIN;Acc:ZDB-GENE-030826-9]
91. pfkpa ENSDARG00000028000 1206 0.927 - - - - - 0.927 - - - phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]
92. ldlrad3 ENSDARG00000078600 926 0.926 - - - - - 0.926 - - - low density lipoprotein receptor class A domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1533]
93. mcm7 ENSDARG00000101180 12417 0.926 - - - - - 0.926 - - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
94. pank1b ENSDARG00000010098 3202 0.926 - - - - - 0.926 - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
95. prkacaa ENSDARG00000100349 2711 0.925 - - - - - 0.925 - - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
96. myo5b ENSDARG00000062003 653 0.925 - - - - - 0.925 - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
97. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.925 - - - - - 0.925 - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
98. etf1 etf1 12861 0.925 - - - - - 0.925 - - -
99. mgat1b ENSDARG00000036065 996 0.925 - - - - - 0.925 - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
100. pi4kaa ENSDARG00000076724 1949 0.925 - - - - - 0.925 - - - phosphatidylinositol 4-kinase, catalytic, alpha a [Source:ZFIN;Acc:ZDB-GENE-100204-2]

There are 811 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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