Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for otx1a

Gene Name Gene ID Reads Annotation
otx1a 1607 orthodenticle homeobox 1a










Genes with expression patterns similar to otx1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. otx1a 1607 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 orthodenticle homeobox 1a
2. DMBX1 DMBX1 140 3.37 - - 0.897 - 0.792 - - 0.742 0.939
3. tnnt2a ENSDARG00000020610 313 2.367 0.799 - 0.796 - 0.772 - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
4. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 2.336 - - 0.893 - - - - 0.725 0.718 transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
5. si:dkeyp-73d8.8 ENSDARG00000094045 17 2 1.000 - - - - 1.000 - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
6. CABZ01081748.1 ENSDARG00000102139 31 1.953 - - - - - 1.000 - 0.953 - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
7. nr2e1 ENSDARG00000017107 340 1.927 1.000 - - - - - - - 0.927 nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
8. gucy2f ENSDARG00000025504 6 1.796 - - - - - 1.000 - - 0.796 guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
9. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1.785 1.000 - - - - 0.785 - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
10. helt ENSDARG00000056400 482 1.78 - - 0.898 - - - - - 0.882 helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
11. syk ENSDARG00000008186 24 1.78 0.896 - - - - 0.884 - - - spleen tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040702-3]
12. zfyve26 ENSDARG00000040131 87 1.744 0.905 - - - - 0.839 - - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
13. OCEL1 OCEL1 27 1.73 - - - - - 1.000 - - 0.730
14. klc4_1 ENSDARG00000086985 22 1.722 1.000 - - - - 0.722 - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
15. cuedc1a ENSDARG00000068716 232 1.7 - - - - - - - 0.846 0.854 CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
16. tdrd9 ENSDARG00000013453 22 1.683 0.742 - - - - 0.941 - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
17. gc3 31 1.68 - - - - - 0.884 - - 0.796 guanylyl cyclase 3, transcript variant X2
18. dlx1a ENSDARG00000013125 142 1.674 0.858 - - - - - - 0.816 - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
19. tnni1b ENSDARG00000052708 478 1.633 - - 0.823 - 0.810 - - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
20. PLIN3 PLIN3 29 1.614 - - - - - 0.715 - - 0.899
21. tube1 ENSDARG00000043982, ENSDARG00000096620 96 1.611 - - - - - 0.875 - 0.736 - tubulin, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1174]
22. MPPED1 ENSDARG00000088181 117 1.605 - - - - - - - 0.720 0.885 metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
23. tfap2d ENSDARG00000023272 308 1.598 - - - - 0.712 - - - 0.886 transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
24. vmhc 234 1.596 - - 0.824 - 0.772 - - - - ventricular myosin heavy chain
25. neurod6a ENSDARG00000040008 17 1.581 - - - - - - - 0.881 0.700 neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
26. dmbx1a ENSDARG00000009922 284 1.57 - - - - - - - 0.702 0.868 diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
27. otx2 766 1.564 - - 0.854 - - - - 0.710 - orthodenticle homeobox 2, transcript variant X2
28. tbr1b ENSDARG00000004712 248 1.562 - - - - - - - 0.782 0.780 T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
29. myl7 ENSDARG00000019096 1023 1.56 - - 0.784 - 0.776 - - - - myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
30. fhl2a ENSDARG00000042018 244 1.516 - - 0.728 - 0.788 - - - - four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
31. hspb12 139 1.513 - - 0.784 - 0.729 - - - - heat shock protein, alpha-crystallin-related, b12
32. nfia ENSDARG00000062420 573 1.493 - - - - - - - 0.718 0.775 nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
33. zgc:173702 ENSDARG00000110229 411 1.484 0.745 - - - - - - 0.739 - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
34. nppa ENSDARG00000052960 295 1.476 - - 0.729 - 0.747 - - - - natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
35. apod apod 344 1.445 - - 0.739 - 0.706 - - - -
36. rab3db ENSDARG00000101534 45 1.436 0.732 - 0.704 - - - - - - RAB3D, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-428]
37. lhx9 ENSDARG00000056979 249 1.423 - - - - - - - 0.717 0.706 LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
38. irx1a ENSDARG00000101831 644 1.418 - - - - - - - 0.706 0.712 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
39. crfb4 ENSDARG00000068711 51 1 - - - - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
40. CU929052.1 CU929052.1 642 1 - - - - - 1.000 - - -
41. USP53 USP53 5 1 1.000 - - - - - - - -
42. ctssa ctssa 24 1 - - - - - 1.000 - - -
43. si:dkey-259p7.1 si:dkey-259p7.1 59 1 1.000 - - - - - - - -
44. ZPLD1 ZPLD1 1 1 - - - - - 1.000 - - -
45. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1 1.000 - - - - - - - - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
46. si:ch211-260m19.8 si:ch211-260m19.8 33 1 - - - - - 1.000 - - -
47. zgc:110353 ENSDARG00000039443 80 1 1.000 - - - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
48. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
49. crybb1l2 ENSDARG00000016793 723 1 1.000 - - - - - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
50. si:dkey-14o18.2 ENSDARG00000062995 1 1 - - - - - 1.000 - - - si:dkey-14o18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-145]
51. MCOLN2 ENSDARG00000098918 12 1 - - - - - 1.000 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
52. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 1 - - - 1.000 - - - - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
53. atad1b ENSDARG00000056609 40 1 - - - - - 1.000 - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
54. si:ch211-30g3.8 si:ch211-30g3.8 10 1 - - - - - 1.000 - - -
55. pcolce2b ENSDARG00000055575 2 1 1.000 - - - - - - - - procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
56. DNAH10 ENSDARG00000061486 29 1 - - - - - 1.000 - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
57. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1 1.000 - - - - - - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
58. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - 1.000 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
59. gabpb1 ENSDARG00000023659 26 1 1.000 - - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
60. or126-7 ENSDARG00000058724 1 1 - - - - - 1.000 - - - odorant receptor, family E, subfamily 126, member 7 [Source:ZFIN;Acc:ZDB-GENE-070806-104]
61. nif3l1 ENSDARG00000045249 28 1 - - - - - 1.000 - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
62. tcf23 ENSDARG00000087381 6 1 1.000 - - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
63. si:dkey-71h2.4 si:dkey-71h2.4 6 1 - - - - - 1.000 - - -
64. pola2 ENSDARG00000015070 2286 1 - - - 1.000 - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
65. tmem119a ENSDARG00000095259 1 1 - - - - - 1.000 - - - transmembrane protein 119a [Source:ZFIN;Acc:ZDB-GENE-060526-69]
66. ARHGEF40 ENSDARG00000078979 25 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
67. CU695221.1 CU695221.1 1 1 - - - - - 1.000 - - -
68. cnot7 ENSDARG00000032116, ENSDARG00000115413 184 1 1.000 - - - - - - - - CCR4-NOT transcription complex, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-061013-29]
69. BX569778.1 BX569778.1 36 1 1.000 - - - - - - - -
70. fndc7 fndc7 3 1 - - - - - 1.000 - - -
71. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
72. zgc:113425 ENSDARG00000026616 29 1 1.000 - - - - - - - - zgc:113425 [Source:ZFIN;Acc:ZDB-GENE-050320-128]
73. CABZ01071909.3 CABZ01071909.3 14 1 - - - - - 1.000 - - -
74. TEAD1 TEAD1 43 1 1.000 - - - - - - - -
75. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
76. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
77. CABZ01117474.1 CABZ01117474.1 2 1 - - - - - 1.000 - - -
78. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1 1.000 - - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
79. si:dkey-65b12.6 ENSDARG00000076830 2489 1 - - - 1.000 - - - - - si:dkey-65b12.6 [Source:ZFIN;Acc:ZDB-GENE-060526-329]
80. mir30b 4 1 1.000 - - - - - - - - microRNA 30b
81. taar14f ENSDARG00000088859, ENSDARG00000114926 1 1 - - - - - 1.000 - - - trace amine associated receptor 14f [Source:ZFIN;Acc:ZDB-GENE-041210-313]
82. ft2 ENSDARG00000109567 5 1 1.000 - - - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
83. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
84. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - - - - 1.000 - - -
85. BICD2_1 BICD2_1 18 1 - - - - - 1.000 - - -
86. dnase1l3l dnase1l3l 16 1 1.000 - - - - - - - -
87. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
88. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - - - - 1.000 - - -
89. C3H16orf89 C3H16orf89 449 1 1.000 - - - - - - - -
90. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 - - - - - 1.000 - - -
91. CYP46A1 CYP46A1 16 1 1.000 - - - - - - - -
92. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
93. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
94. si:dkey-37o8.1 ENSDARG00000071727 64 1 1.000 - - - - - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
95. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - - - - - 1.000 - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
96. si:rp71-26b20.1 si:rp71-26b20.1 11 1 - - - - - 1.000 - - -
97. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - 1.000 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
98. chpfb ENSDARG00000078037 30 1 - - - - - 1.000 - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
99. dio2 ENSDARG00000094857 17 1 1.000 - - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
100. abcc9 ENSDARG00000015985 20 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]

There are 806 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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