Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for otub1b

Gene Name Gene ID Reads Annotation
otub1b ENSDARG00000011462 4329 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]










Genes with expression patterns similar to otub1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. otub1b ENSDARG00000011462 4329 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
2. derl1 ENSDARG00000021905 4698 4.018 - 0.924 - 0.710 - 0.767 0.793 - 0.824 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
3. vgll4b ENSDARG00000103730 5266 2.493 - 0.935 - - - 0.818 0.740 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
4. cdca8 ENSDARG00000043137 7541 2.447 - - - - - 0.836 0.860 0.751 - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
5. srpr 5148 2.441 - 0.832 - - - - 0.750 - 0.859 signal recognition particle receptor (docking protein)
6. fam222ba ENSDARG00000059886 1648 2.435 - 0.969 - - - 0.702 - - 0.764 family with sequence similarity 222, member Ba [Source:ZFIN;Acc:ZDB-GENE-060526-355]
7. arid4a ENSDARG00000043873 4176 2.413 - 0.961 - - - 0.705 - - 0.747 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
8. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.352 - 0.843 - - - - 0.756 0.753 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
9. bbip1 ENSDARG00000071046, ENSDARG00000112897, ENSDARG00000116522 1062 2.322 - - - - - 0.713 0.778 - 0.831 BBSome interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050208-445]
10. TAF2 ENSDARG00000102307 1401 2.308 - - - - 0.719 - - 0.720 0.869 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
11. ik ENSDARG00000004161 3132 1.832 - 0.966 - - - - - - 0.866 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
12. st8sia2 ENSDARG00000018788 2183 1.826 - 0.968 - - - - - - 0.858 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
13. rab14 ENSDARG00000074246 4084 1.825 - 0.951 - - - 0.874 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
14. UBL4A UBL4A 1115 1.811 - 0.956 - - - - - - 0.855
15. clcn3 ENSDARG00000003269, ENSDARG00000110064 2961 1.797 0.839 0.958 - - - - - - - chloride channel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1699]
16. si:rp71-61h23.4 1921 1.772 - 0.909 - - - - - - 0.863 si:rp71-61h23.4
17. mcts1 ENSDARG00000025972 4662 1.771 - 0.955 - - - - - - 0.816 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
18. nhp2 ENSDARG00000069422 9925 1.753 - 0.916 - - - - 0.837 - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
19. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.749 - 0.934 - - - - - - 0.815 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
20. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.738 - 0.924 - - 0.814 - - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
21. fzd1 ENSDARG00000106062 1581 1.72 - 0.972 - - - 0.748 - - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
22. ppp1cc 2361 1.719 - 0.928 - - - - 0.791 - - protein phosphatase 1, catalytic subunit, gamma isozyme
23. tarbp2 ENSDARG00000070471 1946 1.706 - 0.967 - - - - 0.739 - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
24. zfhx4 ENSDARG00000075542 6927 1.696 - 0.957 - - - - 0.739 - - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
25. csnk1da ENSDARG00000008370 3469 1.691 - 0.917 - - - 0.774 - - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
26. naa25 ENSDARG00000075446 1505 1.691 - - - - - - - 0.802 0.889 N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-041111-190]
27. dcaf13 ENSDARG00000002267 2435 1.69 - 0.866 - - - - - - 0.824 ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
28. atp5ia 4773 1.689 - 0.903 - - - - 0.786 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
29. mrpl19 ENSDARG00000011885 2208 1.689 - 0.960 - - - 0.729 - - - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
30. bre bre 1233 1.688 - - - - - 0.810 - - 0.878
31. C15H11orf57 C15H11orf57 860 1.68 - 0.960 - - - - 0.720 - -
32. katna1 ENSDARG00000021827 221 1.676 - 0.962 - - - 0.714 - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
33. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.673 - - - - - 0.847 - - 0.826 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
34. psen1 ENSDARG00000004870 1590 1.67 - - - - - 0.825 - - 0.845 presenilin 1 [Source:ZFIN;Acc:ZDB-GENE-991119-4]
35. polr2gl ENSDARG00000056127 1771 1.67 - - - - - - 0.803 - 0.867 polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
36. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.67 - 0.842 - - - - 0.828 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
37. nrp1a ENSDARG00000102153 4154 1.668 - 0.960 - - - - - - 0.708 neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
38. selt1a 9746 1.668 - 0.962 - - - - 0.706 - - selenoprotein T, 1a
39. atp6v1d ENSDARG00000011175 8331 1.665 - 0.947 - - - 0.718 - - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
40. CCDC106 CCDC106 1908 1.656 - - - - - - 0.799 - 0.857
41. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.656 - - - - - 0.854 0.802 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
42. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.652 - 0.924 - - - - - - 0.728 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
43. qser1 ENSDARG00000074750 597 1.652 - - - - - 0.811 - - 0.841 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
44. bahcc1 bahcc1 1934 1.652 - - - - - - 0.796 - 0.856
45. lmnb1 ENSDARG00000044299 9817 1.649 - 0.812 - - - - 0.837 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
46. znf346 ENSDARG00000060695 3942 1.638 - 0.910 - - - - 0.728 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
47. ATP6AP1L_1 ATP6AP1L_1 508 1.637 - - - - - - 0.791 - 0.846
48. samm50l ENSDARG00000039681 2465 1.632 - - - - - - 0.743 - 0.889 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
49. tmem167a ENSDARG00000035914 3319 1.631 - - - - - 0.823 0.808 - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
50. ezrb ENSDARG00000025091 2861 1.626 - - - - - - 0.826 - 0.800 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
51. apmap ENSDARG00000017422 2692 1.625 - - - - - 0.787 - - 0.838 adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
52. kpnb1 ENSDARG00000104889 9282 1.624 0.746 0.878 - - - - - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
53. bmper ENSDARG00000101980 668 1.622 - - - - - 0.786 - - 0.836 BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
54. ltv1 ENSDARG00000008490 2403 1.621 - 0.913 - - - - 0.708 - - LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]
55. rbm42 ENSDARG00000039910 1111 1.619 0.752 - - - - - - - 0.867 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
56. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.618 - - - - - 0.804 - - 0.814 zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
57. brd3a ENSDARG00000006527 1636 1.616 - - - - - - 0.820 - 0.796 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
58. zgc:110425 ENSDARG00000058479 5216 1.613 - 0.911 - - - - 0.702 - - zgc:110425 [Source:ZFIN;Acc:ZDB-GENE-050522-103]
59. emc3 ENSDARG00000020607 3406 1.613 - - - - - - 0.814 - 0.799 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
60. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.61 0.727 0.883 - - - - - - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
61. CU571336.1 ENSDARG00000099892 2164 1.606 - - - - - - 0.767 - 0.839
62. ZNF337_4 ZNF337_4 409 1.606 0.745 - - - - - - - 0.861
63. lhx5 ENSDARG00000057936 785 1.606 - - - - - - - 0.758 0.848 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
64. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.605 0.753 - - - - - - - 0.852 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
65. tusc2b ENSDARG00000025340 2391 1.605 - - - - - - 0.720 - 0.885 tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
66. tom1 ENSDARG00000104581 1457 1.603 - - - - - - 0.738 - 0.865 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
67. DALRD3 ENSDARG00000068602 3062 1.601 - 0.882 - - - 0.719 - - - DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
68. psmd4b ENSDARG00000023279 2002 1.598 - - - - - 0.813 0.785 - - proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
69. abca1a ENSDARG00000074635 1085 1.597 - - - - - - 0.722 - 0.875 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
70. adam17b ENSDARG00000093093 792 1.597 - - - - - 0.747 - - 0.850 ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
71. ssh2a ENSDARG00000088440 1149 1.593 - - - - - - 0.769 - 0.824 slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
72. phb2 phb2 3209 1.592 - - - - - - 0.795 - 0.797
73. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.591 - - - 0.748 - - - - 0.843 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
74. fam102bb ENSDARG00000002333 1483 1.589 - - - - - - 0.778 - 0.811 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
75. pvrl1b 1645 1.587 - - - - - - 0.778 - 0.809 poliovirus receptor-related 1b
76. Sep-02 Sep-02 10074 1.586 - 0.871 - - - - 0.715 - -
77. hic1l ENSDARG00000045660 1489 1.585 0.702 - - - - - - - 0.883 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
78. CABZ01028296.1 CABZ01028296.1 6203 1.585 - - - - - - 0.729 - 0.856
79. cnot3a ENSDARG00000007135 3084 1.584 - - - - - 0.745 - - 0.839 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
80. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.583 - - - - 0.743 - - - 0.840 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
81. taf5 ENSDARG00000018325 1363 1.579 - - - - - - 0.713 - 0.866 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
82. prpf4bb ENSDARG00000040310 2260 1.575 - - - - - - 0.767 - 0.808 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
83. melk ENSDARG00000030759 1150 1.573 - - - - - - - 0.722 0.851 maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
84. CKAP2 CKAP2 930 1.573 - - - - - - 0.714 - 0.859
85. lamtor3 ENSDARG00000057075 2282 1.572 - - - - 0.706 - - - 0.866 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:ZFIN;Acc:ZDB-GENE-050522-345]
86. setd5 ENSDARG00000078576 1974 1.571 - - - - - 0.779 - - 0.792 SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
87. CABZ01057907.1 CABZ01057907.1 1140 1.571 - - - - - - 0.732 - 0.839
88. papss1 ENSDARG00000057099 809 1.571 - - - - - - - 0.713 0.858 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
89. r3hdm1 ENSDARG00000101458 5241 1.569 - - - - - 0.773 0.796 - - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
90. aqr ENSDARG00000016775 1581 1.568 - - - - - - 0.739 - 0.829 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
91. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.567 - 0.758 - - - - - 0.809 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
92. polr2a ENSDARG00000099966 5706 1.566 - - - - - - 0.822 0.744 - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
93. kif15 ENSDARG00000012073 1936 1.563 - - - - - - 0.720 - 0.843 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
94. ncalda ENSDARG00000070688 5069 1.562 - - - - - - 0.741 - 0.821 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
95. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.558 0.713 0.845 - - - - - - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
96. psmd11a ENSDARG00000060150 4529 1.557 - - - - - - 0.785 0.772 - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
97. u2af2a ENSDARG00000012505 2920 1.553 - - - - - - 0.755 0.798 - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
98. map3k7 ENSDARG00000020469 2845 1.553 - - - - 0.701 - 0.852 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
99. zfand6 ENSDARG00000098443 2507 1.552 - - - - - - 0.715 - 0.837 zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
100. MZT1 ENSDARG00000096668 2514 1.543 - - - - - - 0.737 - 0.806 mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]

There are 1629 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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