Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for otub1a

Gene Name Gene ID Reads Annotation
otub1a ENSDARG00000055536 2892 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]










Genes with expression patterns similar to otub1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. otub1a ENSDARG00000055536 2892 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
2. hnrnpk ENSDARG00000018914 8841 2.479 - - - - - - 0.827 0.714 0.938 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
3. rock1 ENSDARG00000058993 2603 2.447 0.702 0.992 - - - - 0.753 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
4. kifc1 ENSDARG00000001558 6658 2.349 0.749 0.749 - - - - 0.851 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
5. KIF2A ENSDARG00000043571 1560 1.977 - 0.990 - - - - - - 0.987 kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
6. ptpn13 ENSDARG00000103699 2866 1.93 - 0.992 - - - - - - 0.938 protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
7. akirin2 ENSDARG00000058729 13245 1.772 - 0.992 - - - - 0.780 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
8. cul4b ENSDARG00000060510 6053 1.77 - 0.987 - - - - 0.783 - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
9. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.769 - 0.948 - - - - - - 0.821 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
10. zc3h15 ENSDARG00000015889 3861 1.764 - 0.991 - - - - 0.773 - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
11. anapc16 ENSDARG00000013822 5857 1.74 - 0.985 - - - - 0.755 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
12. CASK CASK 1750 1.738 - 0.992 - - - - 0.746 - -
13. dpp3 ENSDARG00000020676 2393 1.73 - - - - - - 0.743 - 0.987 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
14. nr2f6a ENSDARG00000003607 4779 1.729 - 0.980 - - - - 0.749 - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
15. pdia5 ENSDARG00000069242 3576 1.727 - 0.990 - - - - 0.737 - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
16. nop16 ENSDARG00000044402 3645 1.722 - 0.979 - - - 0.743 - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
17. lemd3 ENSDARG00000015824 2868 1.72 - 0.992 - - - - 0.728 - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
18. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.718 - 0.952 - - - - 0.766 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
19. tmpoa ENSDARG00000007315 3638 1.715 - - - - - - 0.756 - 0.959 thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
20. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.713 - 0.960 - - - - - - 0.753 structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
21. helz ENSDARG00000030560 3259 1.712 - 0.991 - - - - 0.721 - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
22. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.71 0.729 0.981 - - - - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
23. lman2 ENSDARG00000061854 6251 1.698 - - - - - - 0.731 - 0.967 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
24. kpna4 ENSDARG00000023190 2505 1.691 - - - - - 0.707 - - 0.984 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
25. nr2f2 ENSDARG00000040926 5213 1.686 - - - - - - 0.706 - 0.980 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
26. taf9 ENSDARG00000077870 6992 1.683 - 0.944 - - - - 0.739 - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
27. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.678 - 0.926 - - - - 0.752 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
28. PELP1 ENSDARG00000079313 5771 1.664 - 0.950 - - - - 0.714 - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
29. nap1l4b ENSDARG00000068868 3285 1.663 - - - - - - 0.706 - 0.957 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
30. vps35 ENSDARG00000008224 13245 1.644 - 0.842 - - - - 0.802 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
31. kpna3 ENSDARG00000052641 5347 1.631 - - - - - 0.718 - - 0.913 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
32. brd4 ENSDARG00000078904 5367 1.618 - - - - - - 0.773 - 0.845 bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
33. smarce1 ENSDARG00000016871 9628 1.602 0.773 - - - - - 0.829 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
34. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.584 - 0.831 - - - - 0.753 - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
35. setb ENSDARG00000003920 21788 1.578 0.739 - - - - - 0.839 - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
36. ube2h ENSDARG00000000019 9900 1.577 - 0.778 - - - - - - 0.799 ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
37. h2afva ENSDARG00000068820 16427 1.576 - - - - - 0.767 0.809 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
38. hat1 ENSDARG00000034916 5712 1.568 - - - - - 0.720 0.848 - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
39. ptenb ENSDARG00000056623 5783 1.558 - - - - - - 0.752 - 0.806 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
40. znf503 ENSDARG00000018492 5974 1.548 0.752 - - - - - 0.796 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
41. boc ENSDARG00000074335 4832 1.533 - - - - - - 0.743 - 0.790 BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
42. smarca4 smarca4 9726 1.504 - - - - - 0.756 0.748 - -
43. lypla2 ENSDARG00000053656 8971 1.501 - - - 0.753 - - 0.748 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
44. runx1t1 ENSDARG00000003680 633 1.492 - - - - - 0.730 0.762 - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
45. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.482 - - - - - 0.740 0.742 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
46. ssbp4 ENSDARG00000056483 10196 1.478 - - - - - 0.732 0.746 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
47. sdc4 ENSDARG00000059906 10105 1.478 - - - - - - 0.750 - 0.728 syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
48. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.475 0.738 - - - - - - 0.737 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
49. serpinh1a ENSDARG00000075954 6488 1.469 - 0.738 - - - - - - 0.731 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
50. luc7l ENSDARG00000055903 3357 1.468 0.708 - - - - - 0.760 - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
51. ncoa5 ENSDARG00000016345 5765 1.467 - - - - 0.707 - 0.760 - - nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
52. capns1a ENSDARG00000035329 10870 1.464 - 0.710 - - - - - - 0.754 calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
53. uba1 ENSDARG00000037559 11579 1.463 - - - - - 0.713 0.750 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
54. mafba ENSDARG00000017121 1215 1.462 0.729 - - - - 0.733 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
55. brd7 ENSDARG00000008380 3654 1.453 - - - - - 0.708 0.745 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
56. CABZ01092303.1 CABZ01092303.1 8825 1.448 - - - 0.745 - - 0.703 - -
57. si:dkey-117m1.4 ENSDARG00000093120 1666 1.442 - - - - - 0.726 0.716 - - si:dkey-117m1.4 [Source:ZFIN;Acc:ZDB-GENE-090313-177]
58. prr12a ENSDARG00000074229 1668 1.442 - - - - - 0.711 0.731 - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
59. prkcbp1l ENSDARG00000011932 2714 1.44 - - - 0.730 - - 0.710 - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
60. mcts1 ENSDARG00000025972 4662 1.44 0.726 - - - - - 0.714 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
61. mcm7 ENSDARG00000101180 12417 1.422 0.707 - - - - - 0.715 - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
62. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 0.995 - 0.995 - - - - - - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
63. homer3 homer3 1974 0.995 - - - - - - - - 0.995
64. wu:fb12e11 wu:fb12e11 2332 0.995 - 0.995 - - - - - - -
65. sart3 ENSDARG00000008032 2594 0.995 - 0.995 - - - - - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
66. FP236813.1 FP236813.1 1842 0.994 - 0.994 - - - - - - -
67. zgc:101569 ENSDARG00000038876 1525 0.994 - 0.994 - - - - - - - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
68. ttc3 ENSDARG00000086075 2157 0.994 - 0.994 - - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
69. CABZ01057907.1 CABZ01057907.1 1140 0.994 - 0.994 - - - - - - -
70. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 0.994 - 0.994 - - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
71. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.994 - 0.994 - - - - - - - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
72. MAP4K4 ENSDARG00000098670 4665 0.994 - 0.994 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
73. spen ENSDARG00000074245, ENSDARG00000116696 3054 0.994 - 0.994 - - - - - - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
74. marveld2a ENSDARG00000025076 917 0.994 - 0.994 - - - - - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
75. uck2a ENSDARG00000006074 1554 0.993 - 0.993 - - - - - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
76. maea ENSDARG00000053691 1840 0.993 - 0.993 - - - - - - - macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
77. nucb2b ENSDARG00000036291 911 0.993 - 0.993 - - - - - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
78. smad2 ENSDARG00000006389 646 0.993 - - - - - - - - 0.993 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
79. gtf2f1 ENSDARG00000032129 3041 0.993 - 0.993 - - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
80. gle1 ENSDARG00000043559 1362 0.993 - 0.993 - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
81. C19H1orf85 C19H1orf85 1587 0.993 - 0.993 - - - - - - -
82. eps15l1a ENSDARG00000042670 1565 0.993 - 0.993 - - - - - - - epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
83. traf4b ENSDARG00000038964 346 0.992 - 0.992 - - - - - - - tnf receptor-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-040305-2]
84. GATAD2B ENSDARG00000005834 3855 0.992 - 0.992 - - - - - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
85. C18H15orf39 C18H15orf39 1125 0.992 - 0.992 - - - - - - -
86. hccs hccs 1758 0.992 - 0.992 - - - - - - -
87. SENP7 SENP7 1097 0.992 - - - - - - - - 0.992
88. fndc3ba ENSDARG00000078179 2753 0.992 - 0.992 - - - - - - - fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
89. hoxc10a ENSDARG00000070348 2323 0.992 - 0.992 - - - - - - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
90. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.992 - 0.992 - - - - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
91. SLC6A16_1 SLC6A16_1 1130 0.992 - 0.992 - - - - - - -
92. tgfb3 ENSDARG00000019367 2327 0.992 - 0.992 - - - - - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
93. tmem163a ENSDARG00000079858, ENSDARG00000116870 677 0.992 - - - - - - - - 0.992 transmembrane protein 163a [Source:ZFIN;Acc:ZDB-GENE-081104-429]
94. supt20 ENSDARG00000078658 713 0.992 - 0.992 - - - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
95. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 0.992 - 0.992 - - - - - - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
96. pcloa ENSDARG00000063299 353 0.992 - - - - - - - - 0.992 piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
97. SMARCA1 ENSDARG00000012776 673 0.992 - 0.992 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
98. CR293507.1 ENSDARG00000112572 3198 0.992 - 0.992 - - - - - - -
99. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 0.992 - 0.992 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
100. dnajb5 ENSDARG00000052881, ENSDARG00000116664 885 0.992 - 0.992 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]

There are 927 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA