Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for osr1

Gene Name Gene ID Reads Annotation
osr1 ENSDARG00000014091 770 odd-skipped related transciption factor 1 [Source:ZFIN;Acc:ZDB-GENE-070321-1]










Genes with expression patterns similar to osr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. osr1 ENSDARG00000014091 770 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 odd-skipped related transciption factor 1 [Source:ZFIN;Acc:ZDB-GENE-070321-1]
2. si:ch211-203c7.2 si:ch211-203c7.2 885 2.478 0.777 - - - - 0.706 0.995 - -
3. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 2.369 - 0.700 - - - 0.731 0.938 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
4. twist1a ENSDARG00000030402 3748 2.276 0.770 0.777 - - - 0.729 - - - twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6]
5. lin7c ENSDARG00000027322 3083 1.853 - 0.882 - - - - 0.971 - - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
6. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 1.784 0.800 - - - - - 0.984 - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
7. pla2g12a ENSDARG00000070454 742 1.777 - - - - - 0.801 0.976 - - phospholipase A2, group XIIA [Source:ZFIN;Acc:ZDB-GENE-070410-18]
8. lrba ENSDARG00000031108 2136 1.768 0.802 - - - - - 0.966 - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
9. tmem198b ENSDARG00000034685, ENSDARG00000111728 639 1.753 - 0.771 - - - - 0.982 - - transmembrane protein 198b [Source:ZFIN;Acc:ZDB-GENE-050809-123]
10. met ENSDARG00000070903 2088 1.751 - - - - - 0.821 0.930 - - MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
11. GRB10 GRB10 1496 1.745 - 0.765 - - - - 0.980 - -
12. lcat ENSDARG00000099424 357 1.744 - 0.814 - - - 0.930 - - - lecithin-cholesterol acyltransferase [Source:ZFIN;Acc:ZDB-GENE-010716-3]
13. cacna1ba ENSDARG00000021735 870 1.743 - 0.754 - - - - 0.989 - - calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
14. fkbp8 ENSDARG00000001734 1709 1.723 - - - - - 0.737 0.986 - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
15. fastk ENSDARG00000077075 1619 1.723 - - - - - 0.744 0.979 - - Fas-activated serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-680]
16. zgc:77439 ENSDARG00000039211 1492 1.694 - 0.800 - - - - 0.894 - - zgc:77439 [Source:ZFIN;Acc:ZDB-GENE-031010-24]
17. acsbg2 ENSDARG00000004094 2445 1.686 - 0.738 - - - - 0.948 - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
18. lrp1b lrp1b 3216 1.682 - - - - - 0.701 0.981 - -
19. arpc5b ENSDARG00000019062 2786 1.641 - 0.868 - - - 0.773 - - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
20. prickle1b ENSDARG00000045694 7536 1.637 - - - - - 0.710 0.927 - - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
21. cad ENSDARG00000041895 4977 1.633 - - - - - 0.751 0.882 - - carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:ZFIN;Acc:ZDB-GENE-021030-4]
22. aim1b 1360 1.625 0.746 0.879 - - - - - - - crystallin beta-gamma domain containing 1b
23. C20H6orf58 C20H6orf58 1105 1.618 - - - - - 0.732 0.886 - -
24. epdl2 ENSDARG00000055539 1895 1.602 - - - - - 0.775 0.827 - - ependymin-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-250]
25. abcb5 ENSDARG00000021787 2875 1.569 - 0.722 - - - - 0.847 - - ATP-binding cassette, sub-family B (MDR/TAP), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6414]
26. zgc:85975 4738 1.549 - 0.768 - - - - 0.781 - - zgc:85975
27. dbnla ENSDARG00000008170 2129 1.542 - 0.722 - - - - 0.820 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
28. parvaa ENSDARG00000043710 3495 1.532 - 0.717 - - - - 0.815 - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
29. zgc:158403 ENSDARG00000062757 710 1.527 - 0.804 - - - 0.723 - - - zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]
30. WDR1 ENSDARG00000114022 7532 1.514 - - - - - 0.704 0.810 - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
31. rbp2a ENSDARG00000070038, ENSDARG00000115141 1688 1.511 - 0.762 - - - 0.749 - - - retinol binding protein 2a, cellular [Source:ZFIN;Acc:ZDB-GENE-020320-2]
32. mtp_1 3298 1.498 - 0.754 - - - 0.744 - - - microsomal triglyceride transfer protein
33. pgrmc2 ENSDARG00000030237, ENSDARG00000110406 791 1.485 - 0.734 - - - 0.751 - - - progesterone receptor membrane component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2102]
34. BX957362.1 ENSDARG00000105682 1941 1.443 - 0.719 - - - 0.724 - - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
35. aqp11 ENSDARG00000100555 983 1.441 0.735 0.706 - - - - - - - aquaporin 11 [Source:ZFIN;Acc:ZDB-GENE-080418-1]
36. C10H8orf4 C10H8orf4 361 1.435 0.702 - - - - 0.733 - - -
37. cst3 ENSDARG00000007795 13753 1.433 - 0.708 - - - 0.725 - - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
38. hand2 ENSDARG00000008305 1214 0.995 - - - - - - 0.995 - - heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
39. nup98 ENSDARG00000074955 3998 0.991 - - - - - - 0.991 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
40. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.989 - - - - - - 0.989 - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
41. CNOT4 CNOT4 899 0.989 - - - - - - 0.989 - -
42. si:ch211-51a6.2 ENSDARG00000030967 593 0.988 - - - - - - 0.988 - - si:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
43. NBR1 NBR1 752 0.988 - - - - - - 0.988 - -
44. ccdc22 ENSDARG00000052379 2276 0.987 - - - - - - 0.987 - - coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
45. calub ENSDARG00000005115 1478 0.987 - - - - - - 0.987 - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
46. RAPGEF2 ENSDARG00000005482 2068 0.987 - - - - - - 0.987 - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
47. pdcd10b ENSDARG00000012591 3395 0.987 - - - - - - 0.987 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
48. b2ml ENSDARG00000015887 1060 0.986 - - - - - - 0.986 - - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
49. med14 ENSDARG00000009953 1383 0.986 - - - - - - 0.986 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
50. ralbp1 ENSDARG00000078653 2440 0.985 - - - - - - 0.985 - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
51. si:ch73-18b11.1 si:ch73-18b11.1 3840 0.985 - - - - - - 0.985 - -
52. calcrlb ENSDARG00000011571 623 0.985 - - - - - - 0.985 - - calcitonin receptor-like b [Source:ZFIN;Acc:ZDB-GENE-080924-1]
53. timeless ENSDARG00000078497 1114 0.985 - - - - - - 0.985 - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
54. gnl3 ENSDARG00000006219 3854 0.985 - - - - - - 0.985 - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
55. meig1 ENSDARG00000045705, ENSDARG00000114008, ENSDARG00000115242 570 0.985 - - - - - - 0.985 - - meiosis/spermiogenesis associated 1 [Source:ZFIN;Acc:ZDB-GENE-050320-33]
56. cap1 ENSDARG00000016350 891 0.985 - - - - - - 0.985 - - CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
57. rrp7a ENSDARG00000098934 1123 0.984 - - - - - - 0.984 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
58. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 0.984 - - - - - - 0.984 - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
59. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 0.984 - - - - - - 0.984 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
60. pam ENSDARG00000100170 2442 0.984 - - - - - - 0.984 - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
61. RAB38 122 0.984 - - - - - - 0.984 - - RAB38, member RAS oncogene family
62. hiat1a ENSDARG00000013117 607 0.984 - - - - - - 0.984 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
63. gnpat ENSDARG00000074401 479 0.984 - - - - - - 0.984 - - glyceronephosphate O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-040618-4]
64. tmem104 ENSDARG00000088560 859 0.984 - - - - - - 0.984 - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
65. SLC24A2 ENSDARG00000042988 242 0.984 - - - - - - 0.984 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
66. IGSF8 ENSDARG00000038467 2102 0.984 - - - - - - 0.984 - - immunoglobulin superfamily, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2444]
67. thbs4a ENSDARG00000102777 625 0.984 - - - - - - 0.984 - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
68. ino80c ENSDARG00000055719 1512 0.983 - - - - - - 0.983 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
69. TPGS1 TPGS1 228 0.983 - - - - - - 0.983 - -
70. cdon ENSDARG00000061328 1441 0.983 - - - - - - 0.983 - - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
71. acad11 ENSDARG00000045411 350 0.983 - - - - - - 0.983 - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
72. ptger1a ENSDARG00000078605 312 0.983 - - - - - - 0.983 - - prostaglandin E receptor 1a (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120215-261]
73. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 0.983 - - - - - - 0.983 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
74. ubald1a_1 ENSDARG00000002362 401 0.983 - - - - - - 0.983 - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
75. fam3c ENSDARG00000056152 3833 0.983 - - - - - - 0.983 - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
76. CABZ01115256.1 CABZ01115256.1 683 0.983 - - - - - - 0.983 - -
77. phax ENSDARG00000044298 2302 0.983 - - - - - - 0.983 - - phosphorylated adaptor for RNA export [Source:ZFIN;Acc:ZDB-GENE-040822-42]
78. CU019646.2 CU019646.2 519 0.982 - - - - - - 0.982 - -
79. rnf168 ENSDARG00000112483 594 0.982 - - - - - - 0.982 - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
80. trappc3 ENSDARG00000045364 1021 0.982 - - - - - - 0.982 - - trafficking protein particle complex 3 [Source:ZFIN;Acc:ZDB-GENE-040801-120]
81. rtdr1 rtdr1 158 0.982 - - - - - - 0.982 - -
82. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.982 - - - - - - 0.982 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
83. sos2 ENSDARG00000060506 769 0.982 - - - - - - 0.982 - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
84. TSTD1 TSTD1 608 0.982 - - - - - - 0.982 - -
85. si:ch211-13c6.2 ENSDARG00000027738 1521 0.982 - - - - - - 0.982 - - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
86. dab2 ENSDARG00000031761 2000 0.982 - - - - - - 0.982 - - Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040303-1]
87. magixa ENSDARG00000025108 561 0.982 - - - - - - 0.982 - - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]
88. C13H6orf203 C13H6orf203 881 0.981 - - - - - - 0.981 - -
89. slc35b1 ENSDARG00000038213 465 0.981 - - - - - - 0.981 - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
90. sppl3 ENSDARG00000025220 1892 0.981 - - - - - - 0.981 - - signal peptide peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-050913-71]
91. ripk1l ENSDARG00000006677 593 0.981 - - - - - - 0.981 - - receptor (TNFRSF)-interacting serine-threonine kinase 1, like [Source:ZFIN;Acc:ZDB-GENE-070705-132]
92. ENSDARG00000078787 ENSDARG00000078787 97 0.981 - - - - - - 0.981 - -
93. kmt2bb ENSDARG00000060697 5230 0.981 - - - - - - 0.981 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
94. ankrd6b ENSDARG00000029370 429 0.981 - - - - - - 0.981 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
95. PDE3B ENSDARG00000062190 372 0.981 - - - - - - 0.981 - - phosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]
96. ncoa6 ENSDARG00000071272 759 0.981 - - - - - - 0.981 - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
97. LRP10 ENSDARG00000054539 1895 0.981 - - - - - - 0.981 - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
98. cryba1b ENSDARG00000053875 3256 0.981 - - - - - - 0.981 - - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
99. pcyt2 ENSDARG00000043003 3506 0.981 - - - - - - 0.981 - - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
100. ipmkb ENSDARG00000029291 625 0.981 - - - - - - 0.981 - - inositol polyphosphate multikinase b [Source:ZFIN;Acc:ZDB-GENE-061215-5]

There are 601 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA