Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for opn4xb

Gene Name Gene ID Reads Annotation
opn4xb ENSDARG00000103259 18 opsin 4xb [Source:ZFIN;Acc:ZDB-GENE-070705-526]










Genes with expression patterns similar to opn4xb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn4xb ENSDARG00000103259 18 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 opsin 4xb [Source:ZFIN;Acc:ZDB-GENE-070705-526]
2. PLCXD1_3 PLCXD1_3 35 1.805 - 0.881 0.924 - - - - - -
3. si:ch211-286b5.9 ENSDARG00000086166 27 1.737 - 0.881 0.856 - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
4. zmp:0000001267 ENSDARG00000089192 12 1.681 - 0.772 - - - 0.909 - - - zmp:0000001267 [Source:ZFIN;Acc:ZDB-GENE-140106-227]
5. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1.68 - - 0.872 - - 0.808 - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
6. si:ch211-286b5.2 ENSDARG00000096514 6 1.676 - 0.784 0.892 - - - - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
7. hoxc9a ENSDARG00000092809 18 1.647 - 0.881 - - - - - 0.766 - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
8. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 1.64 - - 0.924 - - - 0.716 - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
9. jph3 ENSDARG00000102204 175 1.633 - 0.881 0.752 - - - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
10. si:dkey-106c17.1 si:dkey-106c17.1 26 1.618 - 0.881 - - - 0.737 - - -
11. DNAH10 ENSDARG00000061486 29 1.618 - 0.881 - - - 0.737 - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
12. cnga3b ENSDARG00000012297 2 1.618 - 0.881 - - - 0.737 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
13. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.618 - 0.881 - - - 0.737 - - -
14. si:dkey-14i17.2 si:dkey-14i17.2 10 1.611 - 0.881 - - 0.730 - - - -
15. SACS ENSDARG00000091042 15 1.574 - - 0.867 - - 0.707 - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
16. tmc4 ENSDARG00000031757 30 1.548 - - 0.757 - - 0.791 - - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
17. NARS2 ENSDARG00000098441 57 1.52 - 0.783 - - - 0.737 - - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
18. slc5a8l ENSDARG00000003697, ENSDARG00000110685 69 1.484 - 0.764 - - - 0.720 - - - solute carrier family 5 (iodide transporter), member 8-like [Source:ZFIN;Acc:ZDB-GENE-061110-98]
19. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1 - - - - - 1.000 - - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
20. si:dkey-40i22.5 si:dkey-40i22.5 8 1 - - - - - 1.000 - - -
21. nkx1.2lb ENSDARG00000099427 220 1 - 1.000 - - - - - - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
22. eef1a1a ENSDARG00000039502 234 1 - 1.000 - - - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
23. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - - - - - 1.000 - - -
24. si:ch73-196i15.2 si:ch73-196i15.2 3 1 - - - - - 1.000 - - -
25. NPPC_1 NPPC_1 11 1 - 1.000 - - - - - - -
26. nrxn2a ENSDARG00000061454 291 1 - 1.000 - - - - - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
27. si:dkey-85k15.6 ENSDARG00000094385 4 1 - 1.000 - - - - - - - si:dkey-85k15.6 [Source:ZFIN;Acc:ZDB-GENE-100922-216]
28. ROCK2 ROCK2 8 1 - - - - - - - 1.000 -
29. PPFIBP1 PPFIBP1 46 1 - 1.000 - - - - - - -
30. sema3h ENSDARG00000042616 75 1 - - - - - 1.000 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
31. si:ch211-279m15.1 si:ch211-279m15.1 67 1 - - - - - 1.000 - - -
32. SLC36A4 ENSDARG00000039661 175 1 - 1.000 - - - - - - - solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
33. mlxip ENSDARG00000059474 12 1 - - - - - 1.000 - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
34. KCNB2 ENSDARG00000088842 35 0.99 - 0.990 - - - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
35. zgc:158463_1 ENSDARG00000089382 23 0.984 - - 0.984 - - - - - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
36. CABZ01118627.1 CABZ01118627.1 18 0.967 - - 0.967 - - - - - -
37. cplx4a ENSDARG00000059978 6 0.953 - - - - - - - 0.953 - complexin 4a [Source:ZFIN;Acc:ZDB-GENE-060526-116]
38. CLEC17A CLEC17A 42 0.95 - - - - - 0.950 - - -
39. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.948 - 0.948 - - - - - - - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
40. ksr2 ENSDARG00000094526 134 0.943 - 0.943 - - - - - - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
41. TRIM14_2 TRIM14_2 15 0.942 - 0.942 - - - - - - -
42. actr5 ENSDARG00000098235 237 0.942 - 0.942 - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
43. piwil1 ENSDARG00000041699 21 0.942 - - - - - 0.942 - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
44. nrxn3b ENSDARG00000062693 192 0.942 - 0.942 - - - - - - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
45. cbln1 ENSDARG00000057296 165 0.942 - 0.942 - - - - - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
46. CR558302.2 CR558302.2 5 0.942 - - - - - 0.942 - - -
47. efemp2b_1 ENSDARG00000020811 77 0.942 - 0.942 - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
48. UNC13A UNC13A 36 0.942 - 0.942 - - - - - - -
49. mmp17a ENSDARG00000078915 1 0.942 - 0.942 - - - - - - - matrix metallopeptidase 17a [Source:ZFIN;Acc:ZDB-GENE-070820-2]
50. PDE2A 122 0.942 - - - - - 0.942 - - - phosphodiesterase 2A
51. CR678040.1 CR678040.1 117 0.942 - 0.942 - - - - - - -
52. gas7a ENSDARG00000074443, ENSDARG00000111294 250 0.942 - 0.942 - - - - - - - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
53. CU693480.1 CU693480.1 51 0.942 - 0.942 - - - - - - -
54. si:ch73-334d15.1 ENSDARG00000061672 49 0.942 - 0.942 - - - - - - - si:ch73-334d15.1 [Source:ZFIN;Acc:ZDB-GENE-091118-35]
55. si:dkeyp-51b9.3 ENSDARG00000092379 1374 0.942 - 0.942 - - - - - - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
56. zgc:114174 ENSDARG00000057884, ENSDARG00000109852 100 0.942 - 0.942 - - - - - - - zgc:114174 [Source:ZFIN;Acc:ZDB-GENE-050626-103]
57. mif4gdb ENSDARG00000102578 31 0.942 - 0.942 - - - - - - - MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
58. zgc:172106 ENSDARG00000017984 90 0.929 - - 0.929 - - - - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
59. kcna1 kcna1 174 0.927 - - 0.927 - - - - - -
60. si:ch211-250m6.8 si:ch211-250m6.8 51 0.926 - - - - - 0.926 - - -
61. dtnbb ENSDARG00000013020 280 0.926 - 0.926 - - - - - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
62. prdm8 ENSDARG00000025017 370 0.925 - 0.925 - - - - - - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
63. btr24 ENSDARG00000102143, ENSDARG00000105283 2 0.924 - - 0.924 - - - - - - bloodthirsty-related gene family, member 24 [Source:ZFIN;Acc:ZDB-GENE-070705-376]
64. SBK3_1 SBK3_1 21 0.924 - - 0.924 - - - - - -
65. oprd1b ENSDARG00000037159 21 0.924 - - 0.924 - - - - - - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
66. scpp5 ENSDARG00000078622 15 0.924 - - 0.924 - - - - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
67. sec22bb ENSDARG00000100435 33 0.924 - - 0.924 - - - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
68. nme8 ENSDARG00000098944 2 0.924 - - 0.924 - - - - - - NME/NM23 family member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-39]
69. arhgap20b ENSDARG00000093708 2 0.924 - - 0.924 - - - - - - Rho GTPase activating protein 20b [Source:ZFIN;Acc:ZDB-GENE-060526-383]
70. rab11fip5a ENSDARG00000104179 5 0.924 - - 0.924 - - - - - - RAB11 family interacting protein 5a (class I) [Source:ZFIN;Acc:ZDB-GENE-090313-206]
71. fgf19 ENSDARG00000098663 12 0.924 - - 0.924 - - - - - - fibroblast growth factor 19 [Source:ZFIN;Acc:ZDB-GENE-030729-32]
72. LPL ENSDARG00000087697 18 0.924 - - 0.924 - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
73. CABZ01052227.1 CABZ01052227.1 4 0.924 - - 0.924 - - - - - -
74. ankrd24 ENSDARG00000062103 70 0.923 - 0.923 - - - - - - - ankyrin repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-050208-747]
75. CABZ01032454.1 CABZ01032454.1 7 0.923 - 0.923 - - - - - - -
76. syt4 ENSDARG00000036505 421 0.923 - 0.923 - - - - - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
77. zgc:162184 ENSDARG00000077217 47 0.922 - - - - - 0.922 - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
78. si:dkey-61f9.4 si:dkey-61f9.4 6 0.922 - - 0.922 - - - - - -
79. KCNS1 KCNS1 24 0.922 - - 0.922 - - - - - -
80. rims2a ENSDARG00000101606 1088 0.921 - 0.921 - - - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
81. trim35-1 ENSDARG00000052037 43 0.921 - - - - - - 0.921 - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
82. snrnp48 ENSDARG00000039989, ENSDARG00000112516 237 0.918 - 0.918 - - - - - - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-030131-4482]
83. si:dkey-6n6.1 ENSDARG00000062487 222 0.915 - 0.915 - - - - - - - si:dkey-6n6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-80]
84. CR846080.4 CR846080.4 6 0.915 - - 0.915 - - - - - -
85. fkbp5 ENSDARG00000028396 20 0.913 - - 0.913 - - - - - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
86. HIST1H4J HIST1H4J 31 0.913 - - 0.913 - - - - - -
87. si:ch211-113e8.9 ENSDARG00000095065 33 0.911 - - - - - 0.911 - - - si:ch211-113e8.9 [Source:ZFIN;Acc:ZDB-GENE-090313-14]
88. myo3a ENSDARG00000010186 117 0.911 - - - - - 0.911 - - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
89. si:dkey-267j14.7 ENSDARG00000094685 2 0.909 - - 0.909 - - - - - - si:dkey-267j14.7 [Source:ZFIN;Acc:ZDB-GENE-081104-401]
90. sema4ab ENSDARG00000062352 409 0.908 - 0.908 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
91. nek1 ENSDARG00000022350 158 0.908 - 0.908 - - - - - - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
92. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 0.908 - - - - - 0.908 - - - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
93. plek ENSDARG00000104325 21 0.908 - - - - - 0.908 - - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
94. NPDC1 NPDC1 126 0.908 - 0.908 - - - - - - -
95. si:dkey-48k17.29 si:dkey-48k17.29 2 0.907 - - - - - - 0.907 - -
96. npffr1l2 ENSDARG00000062631 127 0.906 - 0.906 - - - - - - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
97. htr5al htr5al 6 0.905 - - 0.905 - - - - - -
98. si:ch211-225p5.3 si:ch211-225p5.3 10 0.905 - - 0.905 - - - - - -
99. pkd2l1 ENSDARG00000022503 372 0.904 - 0.904 - - - - - - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
100. CABZ01084613.1 CABZ01084613.1 22 0.904 - - 0.904 - - - - - -

There are 809 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA