Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for opn4a

Gene Name Gene ID Reads Annotation
opn4a ENSDARG00000022098, ENSDARG00000110010 3 opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]










Genes with expression patterns similar to opn4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn4a ENSDARG00000022098, ENSDARG00000110010 3 5 - - 1.000 1.000 - 1.000 1.000 - 1.000 opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
2. si:ch211-260c23.1 13 2 - - 1.000 - - 1.000 - - - si:ch211-260c23.1, transcript variant X7
3. mettl8 ENSDARG00000017359 36 2 - - - - - 1.000 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
4. fam154b fam154b 2 2 - - 1.000 - - - 1.000 - -
5. cul4a ENSDARG00000096578 14 2 - - - - - 1.000 1.000 - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
6. CU694372.1 ENSDARG00000097988 105 2 - - - - - 1.000 1.000 - -
7. HEPACAM ENSDARG00000112032 1 2 - - - - - 1.000 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
8. th2 ENSDARG00000038384 1 2 - - 1.000 - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
9. si:dkey-167k11.3 si:dkey-167k11.3 3 2 - - - - - 1.000 1.000 - -
10. BX950859.2 BX950859.2 10 1.953 - - 1.000 - - - - - 0.953
11. nbn ENSDARG00000040303 43 1.86 - - - - - 1.000 0.860 - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
12. kcnh1a ENSDARG00000024167 9 1.843 - - - - - - 1.000 - 0.843 potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
13. si:ch73-44m9.2 ENSDARG00000094821 101 1.781 - - - - - 0.781 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
14. BX548000.1 ENSDARG00000099044 45 1.772 - - - - - 1.000 - - 0.772
15. si:dkey-179k24.3 si:dkey-179k24.3 3 1.767 - - 0.767 1.000 - - - - -
16. si:dkey-1d7.3 ENSDARG00000075837 18 1.754 - - - - - 0.878 0.876 - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
17. si:dkey-101d6.4 si:dkey-101d6.4 6 1.753 - - 0.753 1.000 - - - - -
18. hif1al2 ENSDARG00000044550 140 1.751 - - - - - 1.000 0.751 - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
19. cacng7a ENSDARG00000063006 2 1.749 - - - - - 0.749 1.000 - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
20. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1.745 - - - - - 1.000 0.745 - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
21. chmp6b ENSDARG00000102024 37 1.733 - - - 0.733 - - 1.000 - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
22. si:ch211-194e1.8 si:ch211-194e1.8 14 1.727 - - 0.727 - - - 1.000 - -
23. si:ch211-274f20.2 ENSDARG00000058579 51 1.651 - - - - - - 0.702 - 0.949 si:ch211-274f20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-91]
24. CR854899.1 ENSDARG00000102357 8 1.592 - - 0.871 0.721 - - - - -
25. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 1.487 - - 0.767 - - - 0.720 - -
26. vps33a ENSDARG00000101116, ENSDARG00000113488 24 1.47 - - 0.753 - - - 0.717 - - vacuolar protein sorting 33A [Source:ZFIN;Acc:ZDB-GENE-040914-82]
27. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
28. zgc:171704 ENSDARG00000018048 14 1 - - - - - - 1.000 - - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
29. CRFA31.2 CRFA31.2 12 1 - - - 1.000 - - - - -
30. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
31. reep6 ENSDARG00000087349 0 1 - - - - - - 1.000 - - receptor accessory protein 6 [Source:ZFIN;Acc:ZDB-GENE-040912-98]
32. pde6b ENSDARG00000011671 44 1 - - - - - - 1.000 - - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
33. agxta ENSDARG00000052099 65 1 - - - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
34. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
35. def8 ENSDARG00000068208 50 1 - - - - - - 1.000 - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
36. HEXDC ENSDARG00000061216, ENSDARG00000116903 83 1 - - - - - - 1.000 - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:ZFIN;Acc:ZDB-GENE-060929-448]
37. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
38. si:dkeyp-3f10.12 ENSDARG00000105791 3 1 - - - - - - - - 1.000 si:dkeyp-3f10.12 [Source:ZFIN;Acc:ZDB-GENE-081104-20]
39. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - - 1.000 - -
40. mamdc2a ENSDARG00000098345 21 1 - - 1.000 - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
41. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1 - - - - - - 1.000 - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
42. sema3h ENSDARG00000042616 75 1 - - - - - - 1.000 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
43. lsm14b ENSDARG00000025386 23 1 - - - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
44. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
45. zgc:92249 14 1 - - - - - - 1.000 - - zgc:92249
46. ANKRD34A 22 1 - - - - - - 1.000 - - ankyrin repeat domain 34A, transcript variant X2
47. bbs5 ENSDARG00000039827 211 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
48. zgc:113426 ENSDARG00000051793 37 1 - - - - - - 1.000 - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
49. si:ch211-274p24.2 ENSDARG00000095185 92 1 - - - - - - 1.000 - - si:ch211-274p24.2 [Source:ZFIN;Acc:ZDB-GENE-050309-265]
50. s1pr4 ENSDARG00000074851 4 1 - - - 1.000 - - - - - sphingosine-1-phosphate receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050506-8]
51. tbx21 ENSDARG00000004473, ENSDARG00000115643 30 1 - - - - - - 1.000 - - T-box 21 [Source:ZFIN;Acc:ZDB-GENE-080104-3]
52. si:dkey-272j9.1 si:dkey-272j9.1 10 1 - - - - - - 1.000 - -
53. taar14l ENSDARG00000069213 11 1 - - - - - - 1.000 - - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
54. cep89 ENSDARG00000005092 4 1 - - - - - 1.000 - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
55. CACNA1E 18 1 - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 E, transcript variant X6
56. ddrgk1 ENSDARG00000037172 14 1 - - - 1.000 - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
57. RBBP6_10 RBBP6_10 0 1 - - - - - - 1.000 - -
58. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - 1.000 - - - - - -
59. GBGT1_1 GBGT1_1 19 1 - - - - - 1.000 - - -
60. men1_1 ENSDARG00000089456 3 1 - - - 1.000 - - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
61. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - 1.000 - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
62. valopa ENSDARG00000021150 71 1 - - - - - - 1.000 - - vertebrate ancient long opsin a [Source:ZFIN;Acc:ZDB-GENE-000427-4]
63. lpar5b ENSDARG00000068638 2 1 - - - - - 1.000 - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
64. FAM188B2 4 1 - - - - - - 1.000 - - family with sequence similarity 188, member B2
65. st8sia1 ENSDARG00000098221 34 1 - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
66. st6galnac1.2 ENSDARG00000043816 51 1 - - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
67. ENSDARG00000029117 ENSDARG00000029117 80 1 - - - - - - 1.000 - -
68. gabrr2a ENSDARG00000052982 21 1 - - - - - - - - 1.000 gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
69. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - - - 1.000 - - - - -
70. TULP1 TULP1 50 1 - - - - - - 1.000 - -
71. GABRA3 ENSDARG00000090883 5 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
72. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - - 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
73. ccdc147 ccdc147 39 1 - - - - - - 1.000 - -
74. bdkrb1 ENSDARG00000020744 4 1 - - - - - 1.000 - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
75. NUGGC NUGGC 9 1 - - - - - 1.000 - - -
76. ENSDARG00000086059 ENSDARG00000086059 9 1 - - - - - 1.000 - - -
77. si:dkey-253d23.9 ENSDARG00000074820 24 1 - - - - - 1.000 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
78. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
79. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
80. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - - 1.000 - - -
81. si:dkey-157g20.2 si:dkey-157g20.2 29 1 - - - - - - 1.000 - -
82. abcc12 ENSDARG00000013050 27 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [Source:ZFIN;Acc:ZDB-GENE-050517-25]
83. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
84. C5AR1 1 1 - - - 1.000 - - - - - C5a anaphylatoxin chemotactic receptor
85. taar14d ENSDARG00000091705, ENSDARG00000111452 1 1 - - - - - 1.000 - - - trace amine associated receptor 14d [Source:ZFIN;Acc:ZDB-GENE-041210-315]
86. BX294190.1 BX294190.1 17 1 - - - 1.000 - - - - -
87. CR848029.1 CR848029.1 1 1 - - - - - - 1.000 - -
88. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
89. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - - - - - - 1.000 - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
90. cacng7b ENSDARG00000070624 18 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
91. ca10b ENSDARG00000009568 8 1 - - - - - - - - 1.000 carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
92. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
93. si:ch211-170d12.2 si:ch211-170d12.2 1 1 - - - 1.000 - - - - -
94. CU464087.2 CU464087.2 15 1 - - 1.000 - - - - - -
95. rfx6 ENSDARG00000041702 0 1 - - - - - - 1.000 - - regulatory factor X, 6 [Source:ZFIN;Acc:ZDB-GENE-041014-299]
96. pole2 ENSDARG00000100028 42 1 - - - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
97. CU459095.1 CU459095.1 7 1 - - - - - 1.000 - - -
98. CMA1_9 CMA1_9 1 1 - - - - - 1.000 - - -
99. CABZ01086544.1 CABZ01086544.1 0 1 - - - 1.000 - - - - -
100. cdc42ep2 ENSDARG00000053959 32 1 - - - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]

There are 923 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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