Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for opn4a

Gene Name Gene ID Reads Annotation
opn4a ENSDARG00000022098, ENSDARG00000110010 3 opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]










Genes with expression patterns similar to opn4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn4a ENSDARG00000022098, ENSDARG00000110010 3 5 - - 1.000 1.000 - 1.000 1.000 - 1.000 opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
2. si:dkey-167k11.3 si:dkey-167k11.3 3 2 - - - - - 1.000 1.000 - -
3. th2 ENSDARG00000038384 1 2 - - 1.000 - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
4. CU694372.1 ENSDARG00000097988 105 2 - - - - - 1.000 1.000 - -
5. HEPACAM ENSDARG00000112032 1 2 - - - - - 1.000 1.000 - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
6. fam154b fam154b 2 2 - - 1.000 - - - 1.000 - -
7. si:ch211-260c23.1 13 2 - - 1.000 - - 1.000 - - - si:ch211-260c23.1, transcript variant X7
8. mettl8 ENSDARG00000017359 36 2 - - - - - 1.000 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
9. cul4a ENSDARG00000096578 14 2 - - - - - 1.000 1.000 - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
10. BX950859.2 BX950859.2 10 1.953 - - 1.000 - - - - - 0.953
11. nbn ENSDARG00000040303 43 1.86 - - - - - 1.000 0.860 - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
12. kcnh1a ENSDARG00000024167 9 1.843 - - - - - - 1.000 - 0.843 potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
13. si:ch73-44m9.2 ENSDARG00000094821 101 1.781 - - - - - 0.781 1.000 - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
14. BX548000.1 ENSDARG00000099044 45 1.772 - - - - - 1.000 - - 0.772
15. si:dkey-179k24.3 si:dkey-179k24.3 3 1.767 - - 0.767 1.000 - - - - -
16. si:dkey-1d7.3 ENSDARG00000075837 18 1.754 - - - - - 0.878 0.876 - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
17. si:dkey-101d6.4 si:dkey-101d6.4 6 1.753 - - 0.753 1.000 - - - - -
18. hif1al2 ENSDARG00000044550 140 1.751 - - - - - 1.000 0.751 - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
19. cacng7a ENSDARG00000063006 2 1.749 - - - - - 0.749 1.000 - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
20. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1.745 - - - - - 1.000 0.745 - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
21. chmp6b ENSDARG00000102024 37 1.733 - - - 0.733 - - 1.000 - - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
22. si:ch211-194e1.8 si:ch211-194e1.8 14 1.727 - - 0.727 - - - 1.000 - -
23. si:ch211-274f20.2 ENSDARG00000058579 51 1.651 - - - - - - 0.702 - 0.949 si:ch211-274f20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-91]
24. CR854899.1 ENSDARG00000102357 8 1.592 - - 0.871 0.721 - - - - -
25. si:dkeyp-93h6.3 si:dkeyp-93h6.3 31 1.487 - - 0.767 - - - 0.720 - -
26. vps33a ENSDARG00000101116, ENSDARG00000113488 24 1.47 - - 0.753 - - - 0.717 - - vacuolar protein sorting 33A [Source:ZFIN;Acc:ZDB-GENE-040914-82]
27. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - 1.000 - -
28. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1 - - 1.000 - - - - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
29. SLC2A4RG SLC2A4RG 47 1 - - - - - - 1.000 - -
30. ssrp1b ENSDARG00000016994 58 1 - - - - - - 1.000 - - structure specific recognition protein 1b [Source:ZFIN;Acc:ZDB-GENE-041008-209]
31. GPT GPT 2 1 - - 1.000 - - - - - -
32. morc3b ENSDARG00000043271 8 1 - - 1.000 - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
33. PLBD1 ENSDARG00000063313 1 1 - - 1.000 - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
34. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - - - 1.000 - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
35. CABZ01087111.1 CABZ01087111.1 42 1 - - - - - 1.000 - - -
36. sync ENSDARG00000035944 8 1 - - - - - - 1.000 - - syncoilin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-060503-747]
37. meis2a ENSDARG00000098240 5 1 - - - - - - - - 1.000 Meis homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-020122-2]
38. UNC119 UNC119 104 1 - - - - - - 1.000 - -
39. si:dkey-158e13.8 si:dkey-158e13.8 1 1 - - - - - - - - 1.000
40. CABZ01073069.1 CABZ01073069.1 5 1 - - - - - - 1.000 - -
41. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 - - - - - - 1.000 - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
42. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
43. olfm3b ENSDARG00000039174 3 1 - - 1.000 - - - - - - olfactomedin 3b [Source:ZFIN;Acc:ZDB-GENE-070912-606]
44. mctp1b ENSDARG00000060871 20 1 - - - - - 1.000 - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
45. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
46. si:ch211-108c6.2 14 1 - - - - - 1.000 - - - si:ch211-108c6.2
47. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
48. IQCG ENSDARG00000068678 77 1 - - - - - - 1.000 - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
49. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
50. CDK18 ENSDARG00000012204 5 1 - - - - - - 1.000 - - cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
51. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]
52. SNORA23 SNORA23 1 1 - - - - - 1.000 - - -
53. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1 - - - - - - 1.000 - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
54. wisp2 ENSDARG00000077882 3 1 - - - - - - 1.000 - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
55. gcnt4b ENSDARG00000077550 2 1 - - - - - - 1.000 - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
56. PEG3_10 PEG3_10 45 1 - - - - - - 1.000 - -
57. fech ENSDARG00000003462 212 1 - - - - - - 1.000 - - ferrochelatase [Source:ZFIN;Acc:ZDB-GENE-000928-1]
58. si:ch73-233k15.3 si:ch73-233k15.3 1 1 - - - - - - - - 1.000
59. zgc:113263 ENSDARG00000045842 51 1 - - - - - - 1.000 - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
60. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
61. epha8 22 1 - - - - - - 1.000 - - eph receptor A8
62. mogat2 ENSDARG00000019228 184 1 - - - - - - - - 1.000 monoacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-186]
63. lctlb ENSDARG00000016337 35 1 - - - - - - 1.000 - - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
64. ms4a17a.4 ENSDARG00000014024 36 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.4 [Source:ZFIN;Acc:ZDB-GENE-070822-16]
65. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
66. pcdh2ab3 ENSDARG00000102719 1 1 - - - - - - - - 1.000 protocadherin 2 alpha b 3 [Source:ZFIN;Acc:ZDB-GENE-041118-3]
67. plac8l1 ENSDARG00000069031 161 1 - - - - - - 1.000 - - PLAC8-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-165]
68. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
69. BX321875.5 BX321875.5 1 1 - - - 1.000 - - - - -
70. CABZ01053600.1 CABZ01053600.1 0 1 - - - - - - 1.000 - -
71. zmat4b ENSDARG00000061419 7 1 - - - - - - 1.000 - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
72. CU633740.2 CU633740.2 16 1 - - - - - 1.000 - - -
73. si:dkey-45e15.9 si:dkey-45e15.9 0 1 - - - - - 1.000 - - -
74. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
75. nr0b2b ENSDARG00000102756 2 1 - - - 1.000 - - - - - nuclear receptor subfamily 0, group B, member 2b [Source:ZFIN;Acc:ZDB-GENE-080403-9]
76. si:dkey-14d8.19 si:dkey-14d8.19 12 1 - - - - - - 1.000 - -
77. si:dkey-9p20.24 si:dkey-9p20.24 4 1 - - - - - - 1.000 - -
78. si:ch73-388k15.1 si:ch73-388k15.1 0 1 - - - - - - 1.000 - -
79. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
80. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
81. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
82. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
83. si:dkey-4c15.18 si:dkey-4c15.18 54 1 - - - - - - 1.000 - -
84. fbxo36b ENSDARG00000039152 7 1 - - - - - - 1.000 - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
85. si:ch211-160j14.4 si:ch211-160j14.4 0 1 - - 1.000 - - - - - -
86. CU638740.4 CU638740.4 1 1 - - - - - 1.000 - - -
87. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
88. si:dkey-16n15.6 ENSDARG00000095805 18 1 - - - - - - 1.000 - - si:dkey-16n15.6 [Source:ZFIN;Acc:ZDB-GENE-110411-70]
89. pax4 ENSDARG00000021336 29 1 - - - - - - - - 1.000 paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
90. si:dkey-30j10.5 ENSDARG00000093186 13 1 - - - - - - 1.000 - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
91. lcp2b ENSDARG00000036215 15 1 - - - 1.000 - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
92. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - - 1.000 - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
93. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1 - - - - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
94. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
95. si:dkey-220o21.3 ENSDARG00000103079 1 1 - - - - - - 1.000 - - si:dkey-220o21.3 [Source:ZFIN;Acc:ZDB-GENE-110914-75]
96. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 1 - - - - - - - - 1.000 osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
97. tuba7l ENSDARG00000104643 33 1 - - - - - - 1.000 - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
98. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
99. taar20t ENSDARG00000095035 1 1 - - - - - - 1.000 - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
100. tmem176l.2 ENSDARG00000089399 22 1 - - 1.000 - - - - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]

There are 923 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA