Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for opn4.1

Gene Name Gene ID Reads Annotation
opn4.1 ENSDARG00000007553 66 opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]










Genes with expression patterns similar to opn4.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn4.1 ENSDARG00000007553 66 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 opsin 4.1 [Source:ZFIN;Acc:ZDB-GENE-030314-2]
2. kcng1 ENSDARG00000099038 23 2.583 - - 0.720 - 0.876 0.987 - - - potassium voltage-gated channel, subfamily G, member 1 [Source:ZFIN;Acc:ZDB-GENE-080220-5]
3. AL929252.1 AL929252.1 81 1.849 0.917 - - - - 0.932 - - -
4. cacng8a ENSDARG00000020450 32 1.797 - - 0.863 - - 0.934 - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
5. CT583625.2 ENSDARG00000094770 57 1.796 - - - - 0.881 0.915 - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
6. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.793 0.798 - - - - 0.995 - - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
7. CU463790.1 CU463790.1 60 1.785 0.798 - - - - 0.987 - - -
8. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.727 0.744 - - - - 0.983 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
9. CLDN20 26 1.726 - - - 0.738 - 0.988 - - - claudin 20, transcript variant X2
10. s100b ENSDARG00000057598 41 1.72 0.838 - - - - 0.882 - - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
11. zgc:154142 ENSDARG00000100792 42 1.709 - - 0.713 - - 0.996 - - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
12. si:ch73-55c23.2 si:ch73-55c23.2 105 1.704 - - - - - 0.757 0.947 - -
13. ADCYAP1R1 ADCYAP1R1 118 1.703 - - - - - 0.961 0.742 - -
14. doc2d ENSDARG00000079962 76 1.67 0.798 - - - - 0.872 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
15. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1.661 0.798 - 0.863 - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
16. angptl5 ENSDARG00000056630 203 1.642 - - - - 0.720 0.922 - - - angiopoietin-like 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5054]
17. si:dkey-193i10.3 si:dkey-193i10.3 70 1.637 - - 0.814 - - - 0.823 - -
18. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1.596 0.798 - 0.798 - - - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
19. C5H9orf172 C5H9orf172 65 1.579 0.773 - - - - 0.806 - - -
20. org ENSDARG00000076474 16 1.555 - - 0.755 - 0.800 - - - - oogenesis-related gene [Source:ZFIN;Acc:ZDB-GENE-050208-584]
21. ptrfb ptrfb 567 1.548 0.730 - - - - 0.818 - - -
22. NUDT8 ENSDARG00000007722 329 1.545 - - - - - 0.820 0.725 - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
23. UTS2R 109 1 1.000 - - - - - - - - urotensin 2 receptor
24. C8H1orf222 C8H1orf222 36 1 1.000 - - - - - - - -
25. arf3a ENSDARG00000070539 29 0.997 - - - - - 0.997 - - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
26. CNTNAP1 ENSDARG00000074524 73 0.997 - - - - - 0.997 - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
27. GRIN2B GRIN2B 140 0.997 - - - - - 0.997 - - -
28. pcdh2g6 9 0.996 - - - - - 0.996 - - - protocadherin 2 gamma 6
29. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.996 - - - - - 0.996 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
30. PFKFB1 ENSDARG00000037140 5 0.996 - - - - - 0.996 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
31. slc35a5 ENSDARG00000000001 17 0.996 - - - - - 0.996 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
32. scpp5 ENSDARG00000078622 15 0.996 - - - - - 0.996 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
33. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.996 - - - - - 0.996 - - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
34. CU062667.1 CU062667.1 4 0.996 - - - - - 0.996 - - -
35. ATXN1L ENSDARG00000086977 4 0.996 - - - - - 0.996 - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
36. PLCXD2 ENSDARG00000058200 8 0.996 - - - - - 0.996 - - - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
37. CABZ01062083.1 CABZ01062083.1 40 0.996 - - - - - 0.996 - - -
38. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 0.996 - - - - - 0.996 - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
39. AL953879.1 AL953879.1 5 0.996 - - - - - 0.996 - - -
40. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 0.996 - - - - - 0.996 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
41. CABZ01079192.1 ENSDARG00000101629 23 0.996 - - - - - 0.996 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
42. zgc:73349 zgc:73349 4 0.996 - - - - - 0.996 - - -
43. retsatl ENSDARG00000034989 41 0.996 - - - - - 0.996 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
44. ADORA1 ADORA1 8 0.996 - - - - - 0.996 - - -
45. irgf1 ENSDARG00000070774 7 0.996 - - - - - 0.996 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
46. ftr03 8 0.996 - - - - - 0.996 - - - finTRIM family, member 3
47. si:dkey-192k22.2 ENSDARG00000095111 4 0.996 - - - - - 0.996 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
48. sdr42e1 ENSDARG00000098838 25 0.996 - - - - - 0.996 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
49. U1_55 U1_55 4 0.996 - - - - - 0.996 - - -
50. pdk2 pdk2 32 0.996 - - - - - 0.996 - - -
51. slc8a4a ENSDARG00000055154 90 0.995 - - - - - 0.995 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
52. si:ch211-223f7.1 si:ch211-223f7.1 38 0.995 - - - - - 0.995 - - -
53. kctd1 ENSDARG00000074056 652 0.995 - - - - - 0.995 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
54. CAMK1 CAMK1 28 0.995 - - - - - 0.995 - - -
55. CABZ01044814.2 CABZ01044814.2 25711 0.995 - - - - - 0.995 - - -
56. CT955963.1 ENSDARG00000100370 23 0.995 - - - - - 0.995 - - -
57. sgms2 57 0.995 - - - - - 0.995 - - - sphingomyelin synthase 2, transcript variant X1
58. mir10b-2 116 0.995 - - - - - 0.995 - - - microRNA 10b-2
59. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.994 - - - - - 0.994 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
60. PARM1 ENSDARG00000114063 58 0.993 - - - - - 0.993 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
61. GPC6 GPC6 4 0.992 - - - - - 0.992 - - -
62. AVL9 ENSDARG00000055538 329 0.992 - - - - - 0.992 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
63. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 0.992 - - - - - 0.992 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
64. gak ENSDARG00000090654 695 0.991 - - - - - 0.991 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
65. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 0.991 - - - - - 0.991 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
66. pstpip1a ENSDARG00000060860 23 0.991 - - - - - 0.991 - - - proline-serine-threonine phosphatase interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050419-251]
67. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 0.991 - - - - - 0.991 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
68. si:dkey-22o22.2 ENSDARG00000102445 149 0.99 - - - - - 0.990 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
69. entpd2b ENSDARG00000044795 7 0.99 - - - - - 0.990 - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
70. RAPH1 RAPH1 294 0.99 - - - - - 0.990 - - -
71. KCNJ3_1 KCNJ3_1 30 0.99 - - - - - 0.990 - - -
72. XKR7 ENSDARG00000026333 175 0.99 - - - - - 0.990 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
73. si:dkey-163m14.10 si:dkey-163m14.10 33 0.99 - - - - - 0.990 - - -
74. mir124-3 26 0.99 - - - - - 0.990 - - - microRNA 124-3
75. RAC1_2 RAC1_2 51 0.99 - - - - - 0.990 - - -
76. grik4 ENSDARG00000026753 22 0.99 - - - - - 0.990 - - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
77. ENSDARG00000086878 ENSDARG00000086878 332 0.989 - - - - - 0.989 - - -
78. DUSP19 DUSP19 10 0.988 - - - - - 0.988 - - -
79. TRPC4_1 TRPC4_1 212 0.988 - - - - - 0.988 - - -
80. BX649494.1 BX649494.1 195 0.988 - - - - - 0.988 - - -
81. msxe msxe 362 0.987 - - - - - 0.987 - - -
82. CABZ01030262.1 CABZ01030262.1 11 0.987 - - - - - 0.987 - - -
83. atat1 ENSDARG00000004472 700 0.987 - - - - - 0.987 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
84. PKN1 PKN1 42 0.987 - - - - - 0.987 - - -
85. BX470254.1_1 ENSDARG00000097402 50 0.986 - - - - - 0.986 - - -
86. CT030712.1 ENSDARG00000044355 83 0.986 - - - - - 0.986 - - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
87. C5H3orf30 C5H3orf30 63 0.986 - - - - - 0.986 - - -
88. SNORA57 SNORA57 148 0.986 - - - - - 0.986 - - -
89. NPFFR1 ENSDARG00000111997 29 0.986 - - - - - 0.986 - - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
90. si:dkey-51d8.11 8 0.986 - - - - - 0.986 - - - si:dkey-51d8.11, transcript variant X6
91. htr3a ENSDARG00000089212 51 0.986 - - - - - 0.986 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
92. si:dkey-81p22.11 ENSDARG00000093797 68 0.986 - - - - - 0.986 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
93. BX004890.2 BX004890.2 84 0.986 - - - - - 0.986 - - -
94. kitlga ENSDARG00000070917 155 0.985 - - - - - 0.985 - - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
95. BX324198.1 BX324198.1 12 0.985 - - - - - 0.985 - - -
96. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 0.985 - - - - - 0.985 - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
97. CR407547.1 ENSDARG00000117572 41 0.984 - - - - - 0.984 - - -
98. si:rp71-36a1.1 ENSDARG00000095295 13 0.984 - - - - - 0.984 - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
99. nrn1b ENSDARG00000042656 44 0.984 - - - - - 0.984 - - - neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
100. FP102801.1_1 FP102801.1_1 238 0.984 - - - - - 0.984 - - -

There are 1379 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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