Zebrafish data search
Results for opn3
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| opn3 | ENSDARG00000052775 | 8 | opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16] |
Genes with expression patterns similar to opn3
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | opn3 | ENSDARG00000052775 | 8 | 5 | - | - | 1.000 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | opsin 3 [Source:ZFIN;Acc:ZDB-GENE-080227-16] |
| 2. | si:ch211-229d2.5 | ENSDARG00000079119 | 95 | 1.951 | - | - | 0.967 | - | 0.984 | - | - | - | - | si:ch211-229d2.5 [Source:ZFIN;Acc:ZDB-GENE-121214-200] |
| 3. | FETUB | ENSDARG00000053973 | 4 | 1.929 | - | - | 0.929 | - | - | - | - | 1.000 | - | fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4] |
| 4. | fndc7 | fndc7 | 3 | 1.834 | - | - | 0.850 | - | 0.984 | - | - | - | - | |
| 5. | si:dkeyp-25a3.1 | si:dkeyp-25a3.1 | 4 | 1.804 | - | - | - | - | - | - | - | 1.000 | 0.804 | |
| 6. | HIST2H4B | HIST2H4B | 9 | 1.788 | - | - | - | - | 0.984 | - | - | - | 0.804 | |
| 7. | cda | 3 | 1.75 | - | - | - | - | 0.946 | - | - | - | 0.804 | cytidine deaminase | |
| 8. | nkx2.5 | ENSDARG00000018004, ENSDARG00000116714 | 23 | 1.717 | - | - | - | 0.813 | - | - | - | 0.904 | - | NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321] |
| 9. | CABZ01057951.1 | CABZ01057951.1 | 10 | 1.643 | - | - | 0.839 | - | - | - | - | - | 0.804 | |
| 10. | RPS6KL1 | ENSDARG00000079024 | 22 | 1.522 | - | - | - | - | 0.814 | - | - | - | 0.708 | ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10] |
| 11. | si:ch211-201b11.3 | si:ch211-201b11.3 | 2 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 12. | BX321875.5 | BX321875.5 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 13. | CABZ01058107.1 | ENSDARG00000112826 | 8 | 1 | - | - | - | - | - | - | - | 1.000 | - | C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085] |
| 14. | DOCK1 | ENSDARG00000099093 | 21 | 1 | - | - | - | - | - | - | - | - | 1.000 | dedicator of cytokinesis 1 [Source:ZFIN;Acc:ZDB-GENE-080108-5] |
| 15. | prkg2 | ENSDARG00000054741, ENSDARG00000116321 | 4 | 1 | - | - | - | - | - | - | - | 1.000 | - | protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80] |
| 16. | BX897671.1 | BX897671.1 | 10 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 17. | cabp7b | ENSDARG00000060846 | 5 | 1 | - | - | - | - | 1.000 | - | - | - | - | calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366] |
| 18. | CABZ01112215.1 | CABZ01112215.1 | 23 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 19. | CABZ01049025.1 | CABZ01049025.1 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 20. | rxfp3.3a3 | ENSDARG00000069246 | 5 | 1 | - | - | - | - | - | - | - | 1.000 | - | relaxin family peptide receptor 3.3a3 [Source:ZFIN;Acc:ZDB-GENE-050419-246] |
| 21. | BX248410.2 | ENSDARG00000090277 | 4 | 1 | - | - | - | - | - | - | - | 1.000 | - | sialic acid-binding Ig-like lectin 7 [Source:NCBI gene;Acc:103910452] |
| 22. | paqr8 | ENSDARG00000088828 | 4 | 1 | - | - | - | - | - | - | - | 1.000 | - | progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3] |
| 23. | CABZ01075923.1 | CABZ01075923.1 | 6 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 24. | BX004785.2 | ENSDARG00000093487 | 10 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 25. | si:dkey-16p19.8 | ENSDARG00000096481 | 6 | 1 | - | - | - | - | - | - | - | 1.000 | - | si:dkey-16p19.8 [Source:ZFIN;Acc:ZDB-GENE-120709-67] |
| 26. | CMA1_12 | CMA1_12 | 0 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 27. | tecpr1a | ENSDARG00000062515 | 7 | 1 | - | - | - | - | - | - | - | 1.000 | - | tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792] |
| 28. | si:dkey-220a11.9 | si:dkey-220a11.9 | 10 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 29. | si:dkey-256i11.4 | si:dkey-256i11.4 | 3 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 30. | cnga1 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | cyclic nucleotide gated channel alpha 1 | |
| 31. | si:dkeyp-68b7.5 | ENSDARG00000079930 | 14 | 1 | - | - | - | - | - | - | - | 1.000 | - | si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670] |
| 32. | ms4a17a.1 | ENSDARG00000043798 | 7 | 1 | - | - | - | - | - | - | - | 1.000 | - | membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307] |
| 33. | CU694807.2 | CU694807.2 | 5 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 34. | mtx3_1 | ENSDARG00000090195 | 12 | 1 | - | - | - | - | - | - | - | 1.000 | - | metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3] |
| 35. | CU459094.1 | ENSDARG00000110517 | 17 | 1 | - | - | - | - | - | - | - | 1.000 | - | uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666] |
| 36. | si:ch211-113a14.15_1 | 2 | 1 | - | - | - | - | - | - | - | 1.000 | - | si:ch211-113a14.15 | |
| 37. | inpp5jb | ENSDARG00000093359 | 4 | 1 | - | - | - | - | - | - | - | 1.000 | - | inositol polyphosphate-5-phosphatase Jb [Source:ZFIN;Acc:ZDB-GENE-081104-46] |
| 38. | B2M | ENSDARG00000053136 | 2 | 1 | - | - | - | - | 1.000 | - | - | - | - | beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88] |
| 39. | cnfn | ENSDARG00000041115 | 21 | 1 | - | - | - | - | - | - | - | 1.000 | - | cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110] |
| 40. | panx3 | ENSDARG00000004627 | 7 | 1 | - | - | - | - | - | - | - | 1.000 | - | pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114] |
| 41. | BX571969.1 | BX571969.1 | 8 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 42. | AL935293.1 | AL935293.1 | 2 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 43. | CARD10 | CARD10 | 0 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 44. | si:dkey-121n8.5 | si:dkey-121n8.5 | 10 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 45. | trhra | ENSDARG00000076546 | 3 | 1 | - | - | - | - | - | - | - | 1.000 | - | thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18] |
| 46. | si:dkeyp-79f12.7 | si:dkeyp-79f12.7 | 5 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 47. | has1 | ENSDARG00000042983 | 2 | 1 | - | - | - | - | - | - | - | 1.000 | - | hyaluronan synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040218-2] |
| 48. | si:dkey-54j5.1 | si:dkey-54j5.1 | 4 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 49. | KNCN | ENSDARG00000101899 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | kinocilin [Source:ZFIN;Acc:ZDB-GENE-070705-385] |
| 50. | GPR108_1 | GPR108_1 | 2 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 51. | si:ch211-79h18.2 | 6 | 1 | - | - | - | - | - | - | - | 1.000 | - | si:ch211-79h18.2, transcript variant X4 | |
| 52. | aste1 | 5 | 1 | - | - | - | - | - | - | - | 1.000 | - | asteroid homolog 1 (Drosophila) | |
| 53. | ryr2b | ENSDARG00000003706 | 6 | 1 | - | - | - | - | - | - | - | 1.000 | - | ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3] |
| 54. | HELZ2_2 | ENSDARG00000012600 | 5 | 1 | - | - | - | - | - | - | - | 1.000 | - | helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021] |
| 55. | FP245465.3 | FP245465.3 | 5 | 1 | - | - | - | - | - | - | - | 1.000 | - | |
| 56. | spo11 | ENSDARG00000013837 | 7 | 1 | - | - | - | - | - | - | - | 1.000 | - | SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900] |
| 57. | ERC2 | ENSDARG00000105178 | 0 | 1 | - | - | - | - | - | - | - | 1.000 | - | ELKS/RAB6-interacting/CAST family member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-700] |
| 58. | si:dkeyp-35e5.10 | ENSDARG00000107425 | 8 | 1 | - | - | - | - | - | - | - | 1.000 | - | si:dkeyp-35e5.10 [Source:ZFIN;Acc:ZDB-GENE-110913-63] |
| 59. | C1QL1 | 1 | 1 | - | - | - | - | - | - | - | 1.000 | - | complement C1q like 1 | |
| 60. | gltpb | ENSDARG00000077962 | 5 | 0.996 | - | - | - | - | 0.996 | - | - | - | - | glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80] |
| 61. | clcn1a | ENSDARG00000062084 | 120 | 0.986 | - | - | - | - | 0.986 | - | - | - | - | chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333] |
| 62. | si:ch73-122g19.1 | ENSDARG00000069323 | 2 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | si:ch73-122g19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-239] |
| 63. | tmem196b | ENSDARG00000090140 | 20 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248] |
| 64. | ZNF337_13 | ZNF337_13 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 65. | si:ch211-231d19.1 | si:ch211-231d19.1 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 66. | aadacl4 | ENSDARG00000044802 | 2 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | arylacetamide deacetylase-like 4 [Source:ZFIN;Acc:ZDB-GENE-080919-2] |
| 67. | CR753886.1 | ENSDARG00000090548 | 22 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | prolactin releasing hormone 2 [Source:NCBI gene;Acc:793765] |
| 68. | gck | ENSDARG00000068006 | 14 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | glucokinase (hexokinase 4) [Source:ZFIN;Acc:ZDB-GENE-060825-204] |
| 69. | si:dkey-233e3.4 | si:dkey-233e3.4 | 3 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 70. | cabp2a | ENSDARG00000052016 | 19 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25] |
| 71. | si:ch211-198f4.4 | si:ch211-198f4.4 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 72. | si:ch211-122l14.7 | ENSDARG00000095576 | 5 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263] |
| 73. | BX511173.1 | ENSDARG00000095842 | 7 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 74. | CU633740.2 | CU633740.2 | 16 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 75. | Metazoa_SRP_12 | Metazoa_SRP_12 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 76. | si:ch211-226f6.1 | ENSDARG00000094038 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | si:ch211-226f6.1 [Source:ZFIN;Acc:ZDB-GENE-070912-217] |
| 77. | cyp2k19 | ENSDARG00000101861 | 129 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1] |
| 78. | trpc5a | ENSDARG00000070504 | 5 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | transient receptor potential cation channel, subfamily C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040812-1] |
| 79. | si:dkey-122c11.7 | ENSDARG00000103721 | 3 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120] |
| 80. | si:dkey-240n22.6 | ENSDARG00000089296, ENSDARG00000106998 | 3 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411] |
| 81. | tmem244 | ENSDARG00000043847 | 3 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54] |
| 82. | SSTR2_1 | SSTR2_1 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 83. | ifit5 | ifit5 | 12 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 84. | AL929276.2 | ENSDARG00000116984 | 2 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 85. | cyp1c2 | ENSDARG00000101789 | 3 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1] |
| 86. | CABZ01044611.1 | CABZ01044611.1 | 8 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 87. | ghrl | ENSDARG00000054239 | 4 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | ghrelin/obestatin prepropeptide [Source:ZFIN;Acc:ZDB-GENE-070622-2] |
| 88. | si:dkeyp-82h4.1 | ENSDARG00000096463 | 18 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49] |
| 89. | chrnb3b | ENSDARG00000038508 | 7 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4] |
| 90. | si:dkey-182i3.11 | ENSDARG00000069270 | 3 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | si:dkey-182i3.11 [Source:ZFIN;Acc:ZDB-GENE-121214-258] |
| 91. | zgc:123284 | ENSDARG00000102720 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | zgc:123284 [Source:ZFIN;Acc:ZDB-GENE-051113-92] |
| 92. | papd4 | 3 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | PAP associated domain containing 4, transcript variant X1 | |
| 93. | CU896602.1 | ENSDARG00000071461 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 94. | jupb | ENSDARG00000059067 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | junction plakoglobin b [Source:ZFIN;Acc:ZDB-GENE-110407-10] |
| 95. | GPR116_1 | GPR116_1 | 1 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | |
| 96. | tecrl2a | ENSDARG00000089485 | 12 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | trans-2,3-enoyl-CoA reductase-like 2a [Source:ZFIN;Acc:ZDB-GENE-131121-138] |
| 97. | hfm1 | ENSDARG00000104288 | 9 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-43] |
| 98. | zgc:175136 | ENSDARG00000103024 | 4 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | zgc:175136 [Source:ZFIN;Acc:ZDB-GENE-080204-122] |
| 99. | lhcgr | ENSDARG00000026081 | 2 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | luteinizing hormone/choriogonadotropin receptor [Source:ZFIN;Acc:ZDB-GENE-040806-3] |
| 100. | SLC5A10 | ENSDARG00000074212 | 11 | 0.984 | - | - | - | - | 0.984 | - | - | - | - | solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155] |
There are 309 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA