Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for opn1sw2

Gene Name Gene ID Reads Annotation
opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]










Genes with expression patterns similar to opn1sw2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
2. cacng5a ENSDARG00000003326 17 1.997 0.997 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
3. CR382327.4 CR382327.4 143 1.997 0.997 1.000 - - - - - - -
4. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1.877 - 1.000 0.877 - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
5. ccr12.3 ccr12.3 79 1.876 0.997 - 0.879 - - - - - -
6. f7 ENSDARG00000034862 405 1.771 0.962 - - - - - 0.809 - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
7. CABZ01086801.1 CABZ01086801.1 41 1.759 0.997 - - - - - - - 0.762
8. pls1 ENSDARG00000039272 39 1.751 - 0.917 - - - - - - 0.834 plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
9. akap9 ENSDARG00000079610 654 1.706 0.861 - - - - - 0.845 - - A kinase (PRKA) anchor protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-7276]
10. OLFM4_1 OLFM4_1 213 1.688 - 0.981 - - - - 0.707 - -
11. TAF1C TAF1C 41 1.687 0.949 0.738 - - - - - - -
12. nupl2 ENSDARG00000029043 105 1.677 0.939 - - - - - - 0.738 - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
13. mapre1a ENSDARG00000042927 164 1.654 0.761 - - - - - 0.893 - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
14. taok2b_1 ENSDARG00000100620 2082 1.456 0.707 0.749 - - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
15. ntpcr ENSDARG00000021853 104 1.438 - - 0.710 - - - 0.728 - - nucleoside-triphosphatase, cancer-related [Source:ZFIN;Acc:ZDB-GENE-040801-200]
16. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
17. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
18. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -
19. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
20. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
21. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
22. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - 1.000 - - - - - - -
23. mipol1 ENSDARG00000104845 6 1 - 1.000 - - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
24. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
25. efhb ENSDARG00000069703 9 1 - 1.000 - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
26. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
27. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
28. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
29. GPC5 GPC5 11 1 - 1.000 - - - - - - -
30. ENSDARG00000096199 ENSDARG00000096199 15 1 - 1.000 - - - - - - -
31. DENND1C DENND1C 1 1 - 1.000 - - - - - - -
32. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
33. si:dkey-40h20.1 ENSDARG00000095252 5 1 - 1.000 - - - - - - - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
34. si:ch73-25f10.6 ENSDARG00000091932 1 1 - 1.000 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]
35. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
36. eif4e1b ENSDARG00000014565 12 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
37. slc9a5 ENSDARG00000078560 76 1 - 1.000 - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
38. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
39. skor1a ENSDARG00000069030 19 1 - 1.000 - - - - - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
40. ccdc113 ENSDARG00000006981 67 1 1.000 - - - - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
41. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
42. SLC37A4 SLC37A4 10 1 - 1.000 - - - - - - -
43. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1 - 1.000 - - - - - - -
44. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
45. klc4_1 ENSDARG00000086985 22 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
46. opn1mw4 ENSDARG00000000638 2 1 - 1.000 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
47. brf2 ENSDARG00000002060 81 1 - 1.000 - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
48. svopb ENSDARG00000014951 1 1 - 1.000 - - - - - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
49. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - 1.000 - - - - - - -
50. LECT2 LECT2 4 1 - 1.000 - - - - - - -
51. spi1b ENSDARG00000000767 88 1 - 1.000 - - - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
52. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
53. ZDHHC12 ZDHHC12 29 1 - 1.000 - - - - - - -
54. npffl ENSDARG00000045016 34 1 - 1.000 - - - - - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
55. abcc13 ENSDARG00000062519 2 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
56. si:ch211-235f12.2 ENSDARG00000092119 31 1 - 1.000 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
57. blnk ENSDARG00000042722 56 1 - 1.000 - - - - - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
58. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
59. pcdh2g12 5 1 - 1.000 - - - - - - - protocadherin 2 gamma 12
60. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - 1.000 - - - - - - -
61. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
62. si:ch211-101n13.1 si:ch211-101n13.1 68 1 - 1.000 - - - - - - -
63. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
64. trim35-38 trim35-38 3 1 - 1.000 - - - - - - -
65. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
66. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
67. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
68. BX539307.1 ENSDARG00000071588 2 1 - 1.000 - - - - - - -
69. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
70. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
71. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
72. si:ch211-141e20.5 si:ch211-141e20.5 7 1 - 1.000 - - - - - - -
73. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
74. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
75. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
76. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
77. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
78. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
79. ncf1 ENSDARG00000033735 83 1 - 1.000 - - - - - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
80. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
81. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
82. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
83. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
84. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
85. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
86. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
87. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
88. si:dkey-102m7.3 ENSDARG00000100366 27 1 - 1.000 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
89. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
90. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
91. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
92. PHF1 ENSDARG00000057439 1 1 - 1.000 - - - - - - - PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
93. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
94. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
95. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
96. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
97. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
98. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
99. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - 1.000 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
100. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6

There are 944 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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