Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for opn1sw2

Gene Name Gene ID Reads Annotation
opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]










Genes with expression patterns similar to opn1sw2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
2. CR382327.4 CR382327.4 143 1.997 0.997 1.000 - - - - - - -
3. cacng5a ENSDARG00000003326 17 1.997 0.997 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
4. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1.877 - 1.000 0.877 - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
5. ccr12.3 ccr12.3 79 1.876 0.997 - 0.879 - - - - - -
6. f7 ENSDARG00000034862 405 1.771 0.962 - - - - - 0.809 - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
7. CABZ01086801.1 CABZ01086801.1 41 1.759 0.997 - - - - - - - 0.762
8. pls1 ENSDARG00000039272 39 1.751 - 0.917 - - - - - - 0.834 plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
9. akap9 ENSDARG00000079610 654 1.706 0.861 - - - - - 0.845 - - A kinase (PRKA) anchor protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-7276]
10. OLFM4_1 OLFM4_1 213 1.688 - 0.981 - - - - 0.707 - -
11. TAF1C TAF1C 41 1.687 0.949 0.738 - - - - - - -
12. nupl2 ENSDARG00000029043 105 1.677 0.939 - - - - - - 0.738 - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
13. mapre1a ENSDARG00000042927 164 1.654 0.761 - - - - - 0.893 - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
14. taok2b_1 ENSDARG00000100620 2082 1.456 0.707 0.749 - - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
15. ntpcr ENSDARG00000021853 104 1.438 - - 0.710 - - - 0.728 - - nucleoside-triphosphatase, cancer-related [Source:ZFIN;Acc:ZDB-GENE-040801-200]
16. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
17. PHF1 ENSDARG00000057439 1 1 - 1.000 - - - - - - - PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
18. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
19. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
20. si:dkey-102m7.3 ENSDARG00000100366 27 1 - 1.000 - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
21. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
22. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
23. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
24. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
25. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
26. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
27. ncf1 ENSDARG00000033735 83 1 - 1.000 - - - - - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
28. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
29. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
30. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
31. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
32. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
33. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
34. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
35. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
36. si:ch211-141e20.5 si:ch211-141e20.5 7 1 - 1.000 - - - - - - -
37. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
38. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
39. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
40. BX539307.1 ENSDARG00000071588 2 1 - 1.000 - - - - - - -
41. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
42. LINS LINS 42 1 - 1.000 - - - - - - -
43. nceh1b nceh1b 22 1 - 1.000 - - - - - - -
44. C1S ENSDARG00000100599 20 1 - 1.000 - - - - - - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
45. fgf21 ENSDARG00000100846 19 1 - 1.000 - - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
46. CU469532.1 CU469532.1 31 1 - 1.000 - - - - - - -
47. chp1 ENSDARG00000052859 34 1 - 1.000 - - - - - - - calcineurin-like EF-hand protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4086]
48. lrrc34 ENSDARG00000062235 23 1 - 1.000 - - - - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
49. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - 1.000 - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
50. dnaaf2 ENSDARG00000103132 24 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
51. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
52. si:dkey-28d5.13 ENSDARG00000077260 3 1 - 1.000 - - - - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
53. snai3 ENSDARG00000031243 31 1 - 1.000 - - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
54. CABZ01034126.1 CABZ01034126.1 2 1 - 1.000 - - - - - - -
55. ryr2b ENSDARG00000003706 6 1 - 1.000 - - - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
56. polr2b ENSDARG00000098783 90 1 - 1.000 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
57. CABZ01079251.1 ENSDARG00000100498 38 1 - 1.000 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
58. npy8br ENSDARG00000005780 15 1 - 1.000 - - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
59. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
60. si:dkey-266h18.3 si:dkey-266h18.3 4 1 - 1.000 - - - - - - -
61. CU571315.2 ENSDARG00000101956 15 1 - 1.000 - - - - - - -
62. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
63. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - 1.000 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
64. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
65. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
66. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
67. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
68. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
69. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
70. slc9a5 ENSDARG00000078560 76 1 - 1.000 - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
71. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
72. eif4e1b ENSDARG00000014565 12 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
73. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
74. si:ch73-25f10.6 ENSDARG00000091932 1 1 - 1.000 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]
75. si:dkey-40h20.1 ENSDARG00000095252 5 1 - 1.000 - - - - - - - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
76. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
77. DENND1C DENND1C 1 1 - 1.000 - - - - - - -
78. ENSDARG00000096199 ENSDARG00000096199 15 1 - 1.000 - - - - - - -
79. GPC5 GPC5 11 1 - 1.000 - - - - - - -
80. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
81. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
82. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
83. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
84. efhb ENSDARG00000069703 9 1 - 1.000 - - - - - - - EF-hand domain family, member B [Source:ZFIN;Acc:ZDB-GENE-091001-1]
85. mipol1 ENSDARG00000104845 6 1 - 1.000 - - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
86. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - 1.000 - - - - - - -
87. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
88. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
89. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -
90. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
91. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
92. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
93. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
94. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
95. trim35-38 trim35-38 3 1 - 1.000 - - - - - - -
96. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
97. si:ch211-101n13.1 si:ch211-101n13.1 68 1 - 1.000 - - - - - - -
98. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - 1.000 - - - - - - -
99. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
100. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]

There are 944 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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