Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for opn1sw1

Gene Name Gene ID Reads Annotation
opn1sw1 ENSDARG00000045677 1 opsin 1 (cone pigments), short-wave-sensitive 1 [Source:ZFIN;Acc:ZDB-GENE-991109-25]










Genes with expression patterns similar to opn1sw1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn1sw1 ENSDARG00000045677 1 2 - - - - 1.000 - - - 1.000 opsin 1 (cone pigments), short-wave-sensitive 1 [Source:ZFIN;Acc:ZDB-GENE-991109-25]
2. zgc:110434_1 30 1.592 - - - - 0.772 - - - 0.820 zgc:110434
3. ENSDARG00000029117 ENSDARG00000029117 80 1.488 - - - - 0.774 - - - 0.714
4. GSTK1_2 GSTK1_2 8 1 - - - - 1.000 - - - -
5. SLC22A23_2 SLC22A23_2 0 1 - - - - 1.000 - - - -
6. zgc:113343 ENSDARG00000103196 2 1 - - - - 1.000 - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
7. illr3 ENSDARG00000018327 5 1 - - - - 1.000 - - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
8. zgc:162971 ENSDARG00000101093 1 1 - - - - 1.000 - - - - zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
9. irf1b ENSDARG00000043249 30 1 - - - - 1.000 - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
10. tmem144b ENSDARG00000036247 2 1 - - - - 1.000 - - - - transmembrane protein 144b [Source:ZFIN;Acc:ZDB-GENE-041010-58]
11. MEIS2 MEIS2 3 1 - - - - 1.000 - - - -
12. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - - - - 1.000 - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
13. MUC5B MUC5B 1 1 - - - - 1.000 - - - -
14. CABZ01071407.1 CABZ01071407.1 6 1 - - - - 1.000 - - - -
15. zgc:173652 22 1 - - - - 1.000 - - - - zgc:173652
16. omga ENSDARG00000086573 3 1 - - - - 1.000 - - - - oligodendrocyte myelin glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-091204-203]
17. ADAD1 ENSDARG00000089181 9 1 - - - - 1.000 - - - - adenosine deaminase domain containing 1 (testis-specific) [Source:ZFIN;Acc:ZDB-GENE-030131-6285]
18. ENDOD1_4 ENDOD1_4 2 1 - - - - 1.000 - - - -
19. si:ch73-211l2.3 ENSDARG00000075932 4 1 - - - - 1.000 - - - - si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
20. si:dkey-34e4.1 ENSDARG00000022085 5 1 - - - - 1.000 - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
21. ZNF70_13 ZNF70_13 1 1 - - - - 1.000 - - - -
22. PEG3_8 PEG3_8 1 1 - - - - 1.000 - - - -
23. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - 1.000 - - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
24. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 1 - - - - 1.000 - - - -
25. KBTBD11 ENSDARG00000104958 8 1 - - - - 1.000 - - - - kelch repeat and BTB (POZ) domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-130530-678]
26. mir430c-2 2 1 - - - - 1.000 - - - - microRNA 430c-2
27. espnla ENSDARG00000078211 8 1 - - - - 1.000 - - - - espin like a [Source:ZFIN;Acc:ZDB-GENE-131121-3]
28. ROCK2_2 ROCK2_2 0 1 - - - - 1.000 - - - -
29. si:ch211-272h9.5 ENSDARG00000092167 8 1 - - - - 1.000 - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
30. U1_34 U1_34 0 1 - - - - 1.000 - - - -
31. BX469930.1 ENSDARG00000092358 3 1 - - - - 1.000 - - - -
32. fam189a1 ENSDARG00000053380 11 1 - - - - 1.000 - - - - family with sequence similarity 189, member A1 [Source:ZFIN;Acc:ZDB-GENE-040718-129]
33. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - 1.000 - - - -
34. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - 1.000 - - - -
35. osmr ENSDARG00000100738 2 1 - - - - - - - - 1.000 oncostatin M receptor [Source:ZFIN;Acc:ZDB-GENE-060526-48]
36. sult1st2 ENSDARG00000041540 1 1 - - - - 1.000 - - - - sulfotransferase family 1, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-27]
37. CABZ01086835.1 ENSDARG00000110902 0 1 - - - - 1.000 - - - - synaptotagmin-4-like [Source:NCBI gene;Acc:101884989]
38. BX000477.1 BX000477.1 1 1 - - - - 1.000 - - - -
39. RNaseP_nuc_2 RNaseP_nuc_2 0 1 - - - - 1.000 - - - -
40. U1_31 U1_31 0 1 - - - - 1.000 - - - -
41. CABZ01076817.1 CABZ01076817.1 4 1 - - - - 1.000 - - - -
42. si:dkey-56e5.2 si:dkey-56e5.2 14 1 - - - - 1.000 - - - -
43. bmpr1ab ENSDARG00000105045 2 1 - - - - 1.000 - - - - bone morphogenetic protein receptor, type IAb [Source:ZFIN;Acc:ZDB-GENE-040912-150]
44. LRRC69 LRRC69 1 1 - - - - 1.000 - - - -
45. CU693477.1 CU693477.1 7 1 - - - - 1.000 - - - -
46. acsl6 0 1 - - - - 1.000 - - - - acyl-CoA synthetase long-chain family member 6
47. fgf22 ENSDARG00000076510, ENSDARG00000114053, ENSDARG00000115407 3 1 - - - - 1.000 - - - - fibroblast growth factor 22 [Source:ZFIN;Acc:ZDB-GENE-050208-380]
48. CABZ01040931.1 ENSDARG00000099474 0 1 - - - - 1.000 - - - -
49. si:ch1073-15f19.2 ENSDARG00000095640 4 1 - - - - 1.000 - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
50. CABZ01076758.1 ENSDARG00000100810 3 1 - - - - 1.000 - - - -
51. GRXCR2 0 1 - - - - 1.000 - - - - glutaredoxin and cysteine rich domain containing 2
52. si:ch211-207l22.1 si:ch211-207l22.1 1 1 - - - - 1.000 - - - -
53. si:ch211-15p9.2 ENSDARG00000062241 1 1 - - - - 1.000 - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
54. si:dkey-51d8.2 si:dkey-51d8.2 0 1 - - - - 1.000 - - - -
55. GPX2 ENSDARG00000089149 10 1 - - - - - - - - 1.000 glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
56. agbl5 ENSDARG00000045900 2 1 - - - - 1.000 - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
57. si:dkey-79c1.1 ENSDARG00000093179 11 1 - - - - 1.000 - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
58. USP2 USP2 157 1 - - - - 1.000 - - - -
59. ENSDARG00000091583 ENSDARG00000091583 0 1 - - - - 1.000 - - - -
60. greb1l_1 ENSDARG00000039196 8 1 - - - - 1.000 - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
61. si:dkey-220o5.5 ENSDARG00000099211 0 1 - - - - 1.000 - - - - si:dkey-220o5.5 [Source:ZFIN;Acc:ZDB-GENE-081104-376]
62. si:ch211-176g6.2 ENSDARG00000079791 4 1 - - - - - - - - 1.000 si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
63. AL935141.5 AL935141.5 24 1 - - - - 1.000 - - - -
64. CABZ01069745.1 CABZ01069745.1 0 1 - - - - 1.000 - - - -
65. CABZ01031627.2 CABZ01031627.2 1 1 - - - - 1.000 - - - -
66. CR753866.2 CR753866.2 6 1 - - - - 1.000 - - - -
67. gatsl3 7 1 - - - - 1.000 - - - - GATS protein-like 3
68. CLCN2 CLCN2 8 1 - - - - 1.000 - - - -
69. PLB1 PLB1 20 1 - - - - 1.000 - - - -
70. Metazoa_SRP_30 Metazoa_SRP_30 10 1 - - - - 1.000 - - - -
71. si:dkey-9i5.4 si:dkey-9i5.4 14 1 - - - - 1.000 - - - -
72. rpz3 ENSDARG00000069728 11 1 - - - - 1.000 - - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
73. si:ch73-138e16.4 ENSDARG00000102363 0 1 - - - - 1.000 - - - - si:ch73-138e16.4 [Source:ZFIN;Acc:ZDB-GENE-070705-203]
74. si:ch211-128b10.5 si:ch211-128b10.5 3 1 - - - - 1.000 - - - -
75. pcdh15b ENSDARG00000008127 2 1 - - - - 1.000 - - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
76. ddx46 ENSDARG00000099458 24 1 - - - - 1.000 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
77. mamdc2a ENSDARG00000098345 21 1 - - - - 1.000 - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
78. clrn1 ENSDARG00000102890 5 1 - - - - - - - - 1.000 clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
79. si:dkey-13k17.1 si:dkey-13k17.1 2 1 - - - - 1.000 - - - -
80. nitr7b ENSDARG00000067977 0 1 - - - - 1.000 - - - - novel immune-type receptor 7b [Source:ZFIN;Acc:ZDB-GENE-041001-8]
81. zgc:103519 zgc:103519 3 1 - - - - 1.000 - - - -
82. DENND1C DENND1C 1 1 - - - - 1.000 - - - -
83. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - 1.000 - - - -
84. si:ch211-79g12.1 ENSDARG00000116692 2 1 - - - - 1.000 - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
85. TMEM150B TMEM150B 1 1 - - - - 1.000 - - - -
86. si:dkey-25i10.1 ENSDARG00000098536 0 1 - - - - 1.000 - - - - si:dkey-25i10.1 [Source:ZFIN;Acc:ZDB-GENE-110913-114]
87. si:dkey-29p23.2 ENSDARG00000113192 2 1 - - - - 1.000 - - - - si:dkey-29p23.2 [Source:ZFIN;Acc:ZDB-GENE-110914-51]
88. CABZ01072853.1 CABZ01072853.1 35 1 - - - - 1.000 - - - -
89. SEMA4D ENSDARG00000067801 5 1 - - - - 1.000 - - - - semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]
90. VWA5A_1 VWA5A_1 6 1 - - - - 1.000 - - - -
91. pnocb ENSDARG00000024189 18 1 - - - - 1.000 - - - - prepronociceptin b [Source:ZFIN;Acc:ZDB-GENE-040114-1]
92. BX088525.2 ENSDARG00000117222 11 1 - - - - 1.000 - - - -
93. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - 1.000 - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
94. CLTCL1_2 CLTCL1_2 1 1 - - - - 1.000 - - - -
95. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - 1.000 - - - -
96. CR392006.2 CR392006.2 0 1 - - - - 1.000 - - - -
97. gig2e ENSDARG00000075757, ENSDARG00000110217 2 1 - - - - 1.000 - - - - grass carp reovirus (GCRV)-induced gene 2e [Source:ZFIN;Acc:ZDB-GENE-130517-2]
98. DDO_1 DDO_1 5 1 - - - - 1.000 - - - -
99. or137-1 ENSDARG00000105789 2 1 - - - - 1.000 - - - - odorant receptor, family H, subfamily 137, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-30]
100. dgcr8 ENSDARG00000035564, ENSDARG00000113898 39 1 - - - - 1.000 - - - - DGCR8 microprocessor complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-3421]

There are 156 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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