Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for opn1mw4

Gene Name Gene ID Reads Annotation
opn1mw4 ENSDARG00000000638 2 opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]










Genes with expression patterns similar to opn1mw4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opn1mw4 ENSDARG00000000638 2 2 - 1.000 - - - 1.000 - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
2. ndufaf1 ENSDARG00000025549 42 1.649 - 0.917 - - - 0.732 - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
3. si:ch211-63o20.7 ENSDARG00000042000 93 1.433 - 0.726 - - - 0.707 - - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
4. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - 1.000 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
5. trim35-38 trim35-38 3 1 - 1.000 - - - - - - -
6. si:dkey-17e16.18 47 1 - 1.000 - - - - - - - si:dkey-17e16.18
7. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
8. si:dkey-84h14.3 si:dkey-84h14.3 3 1 - 1.000 - - - - - - -
9. eif4e1b ENSDARG00000014565 12 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
10. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
11. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
12. BX539307.1 ENSDARG00000071588 2 1 - 1.000 - - - - - - -
13. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
14. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
15. si:dkey-236a14.12 si:dkey-236a14.12 3 1 - 1.000 - - - - - - -
16. zbtb24 ENSDARG00000075533, ENSDARG00000114487 12 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-081022-123]
17. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
18. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
19. klc4_1 ENSDARG00000086985 22 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
20. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
21. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
22. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
23. ncf1 ENSDARG00000033735 83 1 - 1.000 - - - - - - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
24. ociad2 ENSDARG00000052336 102 1 - 1.000 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
25. skor1a ENSDARG00000069030 19 1 - 1.000 - - - - - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
26. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
27. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
28. CU571315.2 ENSDARG00000101956 15 1 - 1.000 - - - - - - -
29. LRRC52 ENSDARG00000090698 1 1 - 1.000 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
30. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
31. si:dkey-28d5.13 ENSDARG00000077260 3 1 - 1.000 - - - - - - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
32. nceh1b nceh1b 22 1 - 1.000 - - - - - - -
33. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
34. SLC37A4 SLC37A4 10 1 - 1.000 - - - - - - -
35. fgf21 ENSDARG00000100846 19 1 - 1.000 - - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
36. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - 1.000 - - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
37. ZDHHC12 ZDHHC12 29 1 - 1.000 - - - - - - -
38. valopb ENSDARG00000054181, ENSDARG00000110871 2 1 - 1.000 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
39. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
40. spi1b ENSDARG00000000767 88 1 - 1.000 - - - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
41. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
42. si:dkey-266h18.3 si:dkey-266h18.3 4 1 - 1.000 - - - - - - -
43. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
44. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -
45. CR382327.4 CR382327.4 143 1 - 1.000 - - - - - - -
46. snai3 ENSDARG00000031243 31 1 - 1.000 - - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
47. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
48. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
49. cacng5a ENSDARG00000003326 17 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
50. GPC5 GPC5 11 1 - 1.000 - - - - - - -
51. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - 1.000 - - - - - - -
52. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
53. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
54. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
55. lrrc34 ENSDARG00000062235 23 1 - 1.000 - - - - - - - leucine rich repeat containing 34 [Source:ZFIN;Acc:ZDB-GENE-091118-73]
56. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - 1.000 - - - - - - -
57. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
58. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1 - 1.000 - - - - - - -
59. blnk ENSDARG00000042722 56 1 - 1.000 - - - - - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
60. CABZ01086354.1 CABZ01086354.1 22 1 - 1.000 - - - - - - -
61. DENND1C DENND1C 1 1 - 1.000 - - - - - - -
62. si:ch211-141e20.5 si:ch211-141e20.5 7 1 - 1.000 - - - - - - -
63. LINS LINS 42 1 - 1.000 - - - - - - -
64. si:ch73-25f10.6 ENSDARG00000091932 1 1 - 1.000 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]
65. C1S ENSDARG00000100599 20 1 - 1.000 - - - - - - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
66. ryr2b ENSDARG00000003706 6 1 - 1.000 - - - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
67. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
68. FANCA ENSDARG00000098241 39 1 - 1.000 - - - - - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
69. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
70. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
71. CABZ01079251.1 ENSDARG00000100498 38 1 - 1.000 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
72. LECT2 LECT2 4 1 - 1.000 - - - - - - -
73. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
74. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
75. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
76. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
77. polr2b ENSDARG00000098783 90 1 - 1.000 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
78. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
79. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
80. si:dkeyp-13d11.2_1 6 1 - 1.000 - - - - - - - si:dkeyp-13d11.2
81. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
82. CU469532.1 CU469532.1 31 1 - 1.000 - - - - - - -
83. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
84. svopb ENSDARG00000014951 1 1 - 1.000 - - - - - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
85. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
86. npy8br ENSDARG00000005780 15 1 - 1.000 - - - - - - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
87. dnaaf2 ENSDARG00000103132 24 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
88. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
89. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
90. slc9a5 ENSDARG00000078560 76 1 - 1.000 - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
91. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
92. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
93. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
94. ENSDARG00000096199 ENSDARG00000096199 15 1 - 1.000 - - - - - - -
95. npffl ENSDARG00000045016 34 1 - 1.000 - - - - - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
96. pcdh2g12 5 1 - 1.000 - - - - - - - protocadherin 2 gamma 12
97. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
98. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - 1.000 - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
99. LRRC41 LRRC41 11 1 - - - - - 1.000 - - -
100. si:ch211-235f12.2 ENSDARG00000092119 31 1 - 1.000 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]

There are 290 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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