Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for opa3

Gene Name Gene ID Reads Annotation
opa3 ENSDARG00000061761 1114 optic atrophy 3 [Source:ZFIN;Acc:ZDB-GENE-050210-1]










Genes with expression patterns similar to opa3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opa3 ENSDARG00000061761 1114 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 optic atrophy 3 [Source:ZFIN;Acc:ZDB-GENE-050210-1]
2. synj2bp ENSDARG00000028321 1143 1.464 - 0.736 - - - 0.728 - - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
3. hmgcl ENSDARG00000021220 2468 1.45 0.724 - - 0.726 - - - - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
4. sorbs2b ENSDARG00000061603 2491 1.449 0.722 - - - - - 0.727 - - sorbin and SH3 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070308-3]
5. SSTR5 ENSDARG00000101655 351 1.448 - 0.705 - - - 0.743 - - - somatostatin receptor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2502]
6. FNIP1 ENSDARG00000102171 1005 1.447 - 0.708 - - - 0.739 - - - folliculin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3586]
7. brd4 ENSDARG00000078904 5367 0.885 - 0.885 - - - - - - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
8. wdr36 ENSDARG00000004774 887 0.876 - - - - - 0.876 - - - WD repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-030131-464]
9. BX571715.2 BX571715.2 1316 0.876 - 0.876 - - - - - - -
10. prrg4 ENSDARG00000030753 1008 0.875 - 0.875 - - - - - - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
11. stx2a ENSDARG00000004618 271 0.873 - - - - - 0.873 - - - syntaxin 2a [Source:ZFIN;Acc:ZDB-GENE-040801-80]
12. stat1a ENSDARG00000006266 1064 0.864 - 0.864 - - - - - - - signal transducer and activator of transcription 1a [Source:ZFIN;Acc:ZDB-GENE-980526-499]
13. TMEM179B ENSDARG00000069495 1074 0.861 - - - - - 0.861 - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
14. col4a3bpa ENSDARG00000024325, ENSDARG00000110459 716 0.858 - 0.858 - - - - - - - collagen, type IV, alpha 3 (Goodpasture antigen) binding protein a [Source:ZFIN;Acc:ZDB-GENE-080724-10]
15. etnk1 ENSDARG00000019420 2166 0.855 - 0.855 - - - - - - - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
16. sptlc2a ENSDARG00000018976 937 0.852 - - - - - 0.852 - - - serine palmitoyltransferase, long chain base subunit 2a [Source:ZFIN;Acc:ZDB-GENE-050522-23]
17. tfdp1b ENSDARG00000016304 3071 0.852 - 0.852 - - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
18. vrk1 ENSDARG00000018006 1759 0.85 - 0.850 - - - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
19. pcyt1aa ENSDARG00000011233 1985 0.849 - - - - - - 0.849 - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
20. ndnl2 ENSDARG00000058212 1042 0.842 - 0.842 - - - - - - - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
21. lrpap1 ENSDARG00000033604, ENSDARG00000116453 1389 0.841 - 0.841 - - - - - - - low density lipoprotein receptor-related protein associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5871]
22. lama4 ENSDARG00000020785 1522 0.841 - - - 0.841 - - - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
23. atg13 ENSDARG00000036040 1251 0.838 - 0.838 - - - - - - - ATG13 autophagy related 13 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1149]
24. foxf1 ENSDARG00000015399 205 0.837 - - - - - 0.837 - - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
25. si:ch73-138n13.1 ENSDARG00000075349 4411 0.836 - 0.836 - - - - - - - si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
26. pagr1 ENSDARG00000076966 1430 0.836 - 0.836 - - - - - - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
27. bcl2_1 bcl2_1 1185 0.835 - 0.835 - - - - - - -
28. tesca ENSDARG00000028346 614 0.834 - 0.834 - - - - - - - tescalcin a [Source:ZFIN;Acc:ZDB-GENE-040426-2632]
29. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 0.834 - - - 0.834 - - - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
30. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 0.834 - 0.834 - - - - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
31. CT573389.2 CT573389.2 1183 0.833 - 0.833 - - - - - - -
32. sec23a ENSDARG00000104230 3910 0.83 - - - - - - 0.830 - - Sec23 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]
33. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 0.828 - 0.828 - - - - - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
34. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 0.828 - 0.828 - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
35. APITD1 950 0.825 - 0.825 - - - - - - - apoptosis-inducing, TAF9-like domain 1
36. rab13 ENSDARG00000034771 3065 0.821 - 0.821 - - - - - - - RAB13, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-30]
37. pccb ENSDARG00000038910 1017 0.819 - - - - - 0.819 - - - propionyl-CoA carboxylase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2467]
38. TMEM131 ENSDARG00000056259, ENSDARG00000114857 1073 0.818 0.818 - - - - - - - - transmembrane protein 131 [Source:ZFIN;Acc:ZDB-GENE-130530-662]
39. mrps21 ENSDARG00000070985 3943 0.816 - - - - - - 0.816 - - mitochondrial ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-070615-13]
40. LIMA1 LIMA1 908 0.814 - - - 0.814 - - - - -
41. ogt.2 1166 0.812 - 0.812 - - - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 2, transcript variant X3
42. DACT3 DACT3 766 0.812 - 0.812 - - - - - - -
43. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 0.811 - - - 0.811 - - - - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
44. gbp1 ENSDARG00000038668 520 0.811 - 0.811 - - - - - - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]
45. VGLL3 ENSDARG00000038305 242 0.81 - - - 0.810 - - - - - vestigial-like family member 3 [Source:ZFIN;Acc:ZDB-GENE-130530-600]
46. rab5ab ENSDARG00000007257 1402 0.81 - 0.810 - - - - - - - RAB5A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040122-3]
47. CABZ01075125.1 ENSDARG00000102972 436 0.809 - - - 0.809 - - - - -
48. fkbp8 ENSDARG00000001734 1709 0.807 - 0.807 - - - - - - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
49. atp2a3 ENSDARG00000060978 1408 0.806 - 0.806 - - - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
50. olfm2b ENSDARG00000102825 741 0.805 - - - - - 0.805 - - - olfactomedin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2402]
51. wdr11 ENSDARG00000075245 743 0.803 - 0.803 - - - - - - - WD repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-081107-28]
52. osbpl9 ENSDARG00000069298 2730 0.803 - - - - - - 0.803 - - oxysterol binding protein-like 9 [Source:ZFIN;Acc:ZDB-GENE-061110-103]
53. snx5 ENSDARG00000020442 2463 0.803 - - - - - - 0.803 - - sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
54. PPAP2A PPAP2A 2409 0.802 - 0.802 - - - - - - -
55. fam89a ENSDARG00000079979 4375 0.802 - 0.802 - - - - - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
56. YEATS2 ENSDARG00000078767, ENSDARG00000097253 854 0.801 0.801 - - - - - - - - YEATS domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-292]
57. cyp2x7 ENSDARG00000044002, ENSDARG00000109785 671 0.801 - 0.801 - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-110114-2]
58. enc1l enc1l 1326 0.8 - 0.800 - - - - - - -
59. gspt1l ENSDARG00000098627 8381 0.8 - - - - - - 0.800 - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
60. amotl2a ENSDARG00000061923 4713 0.8 - - - - - - 0.800 - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
61. snoU2_19 snoU2_19 301 0.8 - - - 0.800 - - - - -
62. ddah2 ENSDARG00000105009 4570 0.798 - - - - - - 0.798 - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
63. ahcyl1 ENSDARG00000056331 1765 0.797 - 0.797 - - - - - - - adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
64. jund ENSDARG00000067850 744 0.797 0.797 - - - - - - - - JunD proto-oncogene, AP-1 transcription factor subunit [Source:ZFIN;Acc:ZDB-GENE-070725-2]
65. im:7148400 im:7148400 787 0.797 - 0.797 - - - - - - -
66. SIK1 ENSDARG00000058606 1982 0.796 - 0.796 - - - - - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
67. sertad2b ENSDARG00000055530 785 0.796 - - - 0.796 - - - - - SERTA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030616-569]
68. cnn3a ENSDARG00000099510 6063 0.796 - 0.796 - - - - - - - calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
69. arrdc3b ENSDARG00000036028 3157 0.795 - - - - - - 0.795 - - arrestin domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-040912-182]
70. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 0.794 - - - - - - 0.794 - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
71. fhl1b ENSDARG00000056653 577 0.793 - - - - - 0.793 - - - four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]
72. nenf ENSDARG00000040192 599 0.793 - 0.793 - - - - - - - neudesin neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-050320-129]
73. rhbdf1 rhbdf1 1608 0.793 - 0.793 - - - - - - -
74. akap1b ENSDARG00000006062 4214 0.792 - - - - - 0.792 - - - A kinase (PRKA) anchor protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6844]
75. rbm39b ENSDARG00000041853 1421 0.79 - - - - - 0.790 - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
76. pkd2 ENSDARG00000014098 2384 0.79 - - - - - - 0.790 - - polycystic kidney disease 2 [Source:ZFIN;Acc:ZDB-GENE-040827-4]
77. adprh ENSDARG00000040712 298 0.789 - - - 0.789 - - - - - ADP-ribosylarginine hydrolase [Source:ZFIN;Acc:ZDB-GENE-040801-190]
78. si:dkey-199f5.8 ENSDARG00000018853 3249 0.789 - 0.789 - - - - - - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
79. mtmr12 ENSDARG00000059817, ENSDARG00000116606 622 0.789 - - - 0.789 - - - - - myotubularin related protein 12 [Source:ZFIN;Acc:ZDB-GENE-050401-1]
80. prom2 ENSDARG00000039406 278 0.789 - - - - - 0.789 - - - prominin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-16]
81. mob2a ENSDARG00000023214, ENSDARG00000111189 1740 0.787 - 0.787 - - - - - - - MOB kinase activator 2a [Source:ZFIN;Acc:ZDB-GENE-040718-56]
82. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 0.787 - 0.787 - - - - - - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
83. eva1a ENSDARG00000061405 896 0.787 - - - 0.787 - - - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
84. chpt1 ENSDARG00000014572 2926 0.786 - 0.786 - - - - - - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
85. vps72 1164 0.786 - - - - - - 0.786 - - vacuolar protein sorting 72 homolog (S. cerevisiae)
86. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 0.785 - 0.785 - - - - - - - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
87. tmem161b ENSDARG00000055989 680 0.781 - - - - - 0.781 - - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
88. cry2a cry2a 2728 0.78 - 0.780 - - - - - - -
89. mgst3 mgst3 3982 0.779 - - - - - - 0.779 - -
90. sgk2a ENSDARG00000063370 421 0.779 - 0.779 - - - - - - - serum/glucocorticoid regulated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9632]
91. micu2 ENSDARG00000009939 557 0.778 - 0.778 - - - - - - - mitochondrial calcium uptake 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3374]
92. rhoac ENSDARG00000116058 9256 0.778 - - - - - - 0.778 - - ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
93. fip1l1b ENSDARG00000070431 1677 0.778 - - - - - 0.778 - - - FIP1 like 1b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041010-138]
94. C1H10orf12 C1H10orf12 1663 0.776 - - - - - - 0.776 - -
95. atf7a ENSDARG00000011298 703 0.776 - - - - - 0.776 - - - activating transcription factor 7a [Source:ZFIN;Acc:ZDB-GENE-050721-2]
96. GPR108 ENSDARG00000096651 1734 0.776 - - - - - - 0.776 - - G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
97. mark2b ENSDARG00000032458 821 0.776 - 0.776 - - - - - - - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
98. tmed9 ENSDARG00000004261 10013 0.776 - - - - - - 0.776 - - transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
99. ISCU ISCU 3648 0.775 - - - - - - 0.775 - -
100. baxa ENSDARG00000020623, ENSDARG00000089129 2611 0.775 - - - - - - 0.775 - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]

There are 308 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA