Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for opa1_1

Gene Name Gene ID Reads Annotation
opa1_1 ENSDARG00000070801 1424 optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]










Genes with expression patterns similar to opa1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opa1_1 ENSDARG00000070801 1424 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
2. myoz2a ENSDARG00000012311 1373 2.341 0.703 - - - - - 0.727 0.911 - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
3. tmsb ENSDARG00000054911 6411 2.234 0.740 - - - - 0.714 0.780 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
4. hspb11 ENSDARG00000002204 879 2.2 0.771 - - - - 0.721 0.708 - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
5. zgc:92518 ENSDARG00000016343 3837 2.171 0.727 - - - - 0.709 0.735 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
6. ppp1r14c ENSDARG00000077341 1587 2.143 0.707 - - - - 0.717 0.719 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
7. zgc:175214 ENSDARG00000022891 1013 1.728 - 0.873 - - - - - 0.855 - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
8. skilb ENSDARG00000022904 300 1.711 - - - - - 0.788 - 0.923 - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
9. nmrk2 ENSDARG00000067848 10293 1.71 - - - - - - 0.729 - 0.981 nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
10. C13H9orf72 C13H9orf72 2310 1.7 - 0.700 - - - - - - 1.000
11. ADCYAP1R1 ADCYAP1R1 118 1.694 - - - - - - 0.749 0.945 -
12. pmp22b ENSDARG00000060457 20406 1.669 - - - - - - 0.728 - 0.941 peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
13. CR388002.1 CR388002.1 1998 1.666 0.857 - - - - - 0.809 - -
14. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 1.664 - - - - - - 0.758 0.906 - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
15. uhmk1 ENSDARG00000059575 1486 1.6 - - - - - 0.854 - 0.746 - U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
16. lpl ENSDARG00000087697 2578 1.597 - - - - - 0.852 0.745 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
17. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 1.579 - - - - - - 0.710 0.869 - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
18. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 1.576 - - - - - 0.792 0.784 - - actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
19. ndc80 ENSDARG00000071694 1162 1.575 - - - - - 0.704 - 0.871 - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
20. itm2cb ENSDARG00000039650 716 1.572 0.789 - - - - 0.783 - - - integral membrane protein 2Cb [Source:ZFIN;Acc:ZDB-GENE-030131-7806]
21. pdcd5 ENSDARG00000026072 3135 1.571 0.832 - - - - 0.739 - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
22. fmnl3 ENSDARG00000004372 821 1.57 - - - - - 0.751 - 0.819 - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
23. chrne ENSDARG00000034307, ENSDARG00000112263 1022 1.549 - - - - - - 0.716 0.833 - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
24. chrnd ENSDARG00000019342 2728 1.547 - - - - - - 0.764 0.783 - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
25. ppp1r14bb ENSDARG00000030161 2349 1.547 - - - - - 0.816 0.731 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
26. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.537 - - - - - - 0.726 0.811 - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
27. setd3 ENSDARG00000016513 1507 1.535 - - - - - 0.828 0.707 - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
28. tamm41 ENSDARG00000100157 1116 1.533 0.718 - - - - - 0.815 - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
29. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.533 - - - - - - 0.717 - 0.816 enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
30. ALDH1L2 ENSDARG00000070230 2550 1.522 0.745 - - - - 0.777 - - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
31. trim63 trim63 2437 1.519 0.759 - - - - 0.760 - - -
32. sms ENSDARG00000008155 1192 1.518 - - - - - 0.722 0.796 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
33. lama4 ENSDARG00000020785 1522 1.508 0.773 - - - - 0.735 - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
34. lmx1ba ENSDARG00000104815 376 1.507 - - - - - 0.734 0.773 - - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
35. TNS1 TNS1 628 1.506 0.704 - - - - 0.802 - - -
36. pbxip1a ENSDARG00000071015 4960 1.506 0.800 - - - - - 0.706 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
37. ppp4r2a ENSDARG00000026540 1782 1.506 - 0.732 - - - 0.774 - - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
38. crls1 ENSDARG00000038000 1088 1.497 0.794 - - - - - 0.703 - - cardiolipin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2519]
39. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.496 - - - - - - 0.743 0.753 - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
40. cyp1d1 ENSDARG00000035569 628 1.494 0.760 - - - - 0.734 - - - cytochrome P450, family 1, subfamily D, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041114-179]
41. chrna1 ENSDARG00000009021 2931 1.494 - - - - - 0.786 0.708 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
42. nup153 ENSDARG00000099972 1462 1.491 - - - - - 0.771 - 0.720 - nucleoporin 153 [Source:ZFIN;Acc:ZDB-GENE-030131-4581]
43. tspan13b ENSDARG00000070479 542 1.488 0.742 - - - - - 0.746 - - tetraspanin 13b [Source:ZFIN;Acc:ZDB-GENE-041010-45]
44. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.486 - - - - - 0.770 0.716 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
45. tpm1 ENSDARG00000087402 1666 1.481 - - - - - - 0.712 0.769 - tropomyosin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-854]
46. mafg2 mafg2 1041 1.481 0.774 - - - - - 0.707 - -
47. C1H10orf12 C1H10orf12 1663 1.476 - - - - - 0.742 - 0.734 -
48. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 1.465 - 0.702 - - - 0.763 - - - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
49. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.463 - 0.726 - - - 0.737 - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
50. PLEKHM3 ENSDARG00000030633 496 1.461 - - - - - 0.702 0.759 - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
51. zcchc10 ENSDARG00000091092 1333 1.46 - 0.707 - - - 0.753 - - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
52. efemp2a ENSDARG00000094324 39261 1.456 0.733 - - - - - 0.723 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
53. ENSDARG00000077141 ENSDARG00000077141 227 1.454 - 0.700 - - - 0.754 - - -
54. C12H10orf71 C12H10orf71 595 1.453 0.746 - - - - - 0.707 - -
55. BX649554.3 BX649554.3 949 1.452 - - - - - 0.724 - 0.728 -
56. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 1.451 - 0.744 - - - 0.707 - - - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
57. klhl41b ENSDARG00000006757 10762 1.45 0.732 - - - - 0.718 - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
58. ms4a17a.14 829 1.448 - - - - - 0.747 0.701 - - membrane-spanning 4-domains, subfamily A, member 17A.14
59. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.445 0.730 - - - - - 0.715 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
60. MRPL52 ENSDARG00000090568 4402 1.441 - - - - - - 0.713 - 0.728 mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
61. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.441 - - - - - 0.740 0.701 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
62. zgc:153662 zgc:153662 4604 1.438 0.718 - - - - - 0.720 - -
63. bves ENSDARG00000058548 2291 1.436 0.715 - - - - 0.721 - - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
64. APLF APLF 691 1.434 - 0.711 - - - - 0.723 - -
65. SYNPO2L SYNPO2L 6697 1.43 0.713 - - - - 0.717 - - -
66. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.427 0.715 - - - - - 0.712 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
67. desi2 ENSDARG00000004460 1593 1.414 - - - - - 0.701 0.713 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
68. atp13a atp13a 2867 1 - - - - - - - - 1.000
69. sema3ga ENSDARG00000042545 1603 1 - - - - - - - - 1.000 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
70. dcaf15 ENSDARG00000077790 1039 1 - - - - - - - - 1.000 DDB1 and CUL4 associated factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-2374]
71. pknox1.2 ENSDARG00000036542 1503 1 - - - - - - - - 1.000 pbx/knotted 1 homeobox 1.2 [Source:ZFIN;Acc:ZDB-GENE-020123-1]
72. BAD BAD 1322 1 - - - - - - - - 1.000
73. inpp5f ENSDARG00000061437 1228 1 - - - - - - - - 1.000 inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
74. zbtb5 1484 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 5
75. sorbs1 ENSDARG00000103435 2297 1 - - - - - - - - 1.000 sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
76. fopnl ENSDARG00000071198 1002 1 - - - - - - - - 1.000 fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
77. tfec ENSDARG00000098745 1399 1 - - - - - - - - 1.000 transcription factor EC [Source:ZFIN;Acc:ZDB-GENE-041210-21]
78. fam135a ENSDARG00000059843 2352 1 - - - - - - - - 1.000 family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
79. dhx8 ENSDARG00000054707 2088 1 - - - - - - - - 1.000 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
80. galnt13 ENSDARG00000099227 1059 1 - - - - - - - - 1.000 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
81. tfam ENSDARG00000063145 4524 0.999 - - - - - - - - 0.999 transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
82. zc3h15 ENSDARG00000015889 3861 0.999 - - - - - - - - 0.999 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
83. hnrnpua ENSDARG00000015206 4012 0.999 - - - - - - - - 0.999 heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
84. acin1b ENSDARG00000026842 3806 0.999 - - - - - - - - 0.999 apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
85. tpd52l2a ENSDARG00000027154 4359 0.999 - - - - - - - - 0.999 tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
86. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 0.999 - - - - - - - - 0.999 ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
87. pck2 ENSDARG00000020956, ENSDARG00000110463 4713 0.999 - - - - - - - - 0.999 phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2266]
88. foxa2 ENSDARG00000003411 2309 0.999 - - - - - - - - 0.999 forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
89. mrps33 ENSDARG00000020015 3551 0.999 - - - - - - - - 0.999 mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
90. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 0.999 - - - - - - - - 0.999 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
91. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 0.999 - - - - - - - - 0.999 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
92. flot2b ENSDARG00000069774 2831 0.999 - - - - - - - - 0.999 flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
93. stx2b ENSDARG00000068217 2567 0.999 - - - - - - - - 0.999 syntaxin 2b [Source:ZFIN;Acc:ZDB-GENE-091204-424]
94. sec63 ENSDARG00000017740 3789 0.999 - - - - - - - - 0.999 SEC63 homolog, protein translocation regulator [Source:ZFIN;Acc:ZDB-GENE-040718-328]
95. pura pura 1854 0.998 - - - - - - - - 0.998
96. rbmx2 ENSDARG00000044380, ENSDARG00000115698 2528 0.998 - - - - - - - - 0.998 RNA binding motif protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-050626-88]
97. cxcr7b cxcr7b 2482 0.998 - - - - - - - - 0.998
98. amotl2a ENSDARG00000061923 4713 0.997 - - - - - - - - 0.997 angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
99. nnt ENSDARG00000023536 7357 0.997 - - - - - - - - 0.997 nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
100. gng3 ENSDARG00000009553 2530 0.997 - - - - - - - - 0.997 guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]

There are 1240 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA