Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for opa1

Gene Name Gene ID Reads Annotation
opa1 ENSDARG00000070801 57 optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]










Genes with expression patterns similar to opa1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. opa1 ENSDARG00000070801 57 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
2. zgc:153896 ENSDARG00000003977 142 2.412 - 0.915 0.746 - - 0.751 - - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
3. ANO7 ANO7 54 1.803 1.000 - - - - 0.803 - - -
4. pvalb5 ENSDARG00000032836 242 1.772 1.000 - - - - - 0.772 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
5. LRFN4 LRFN4 59 1.741 1.000 - - - - - 0.741 - -
6. si:ch211-168h21.3 10 1.728 1.000 - - - - - - 0.728 - si:ch211-168h21.3
7. slc15a4 ENSDARG00000102612 1096 1.717 1.000 - 0.717 - - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
8. bard1 ENSDARG00000076733 40 1.652 - 0.824 - - - 0.828 - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
9. caspa ENSDARG00000008165 286 1.645 - 0.829 0.816 - - - - - - caspase a [Source:ZFIN;Acc:ZDB-GENE-000616-3]
10. si:ch211-113e8.9 ENSDARG00000095065 33 1.637 0.919 - - - - - - 0.718 - si:ch211-113e8.9 [Source:ZFIN;Acc:ZDB-GENE-090313-14]
11. si:dkey-149i8.3 si:dkey-149i8.3 9 1.633 - 0.865 - - - 0.768 - - -
12. fam175b fam175b 37 1.633 - - 0.910 - - - 0.723 - -
13. cdc42l2 ENSDARG00000057869, ENSDARG00000109454 181 1.629 - 0.870 - - - 0.759 - - - cell division cycle 42 like 2 [Source:ZFIN;Acc:ZDB-GENE-060312-21]
14. rce1a ENSDARG00000077909 4 1.626 0.732 - - - - - - - 0.894 Ras converting CAAX endopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-041008-116]
15. si:dkey-93m18.3 ENSDARG00000092664 30 1.624 - - 0.896 - - - - 0.728 - si:dkey-93m18.3 [Source:ZFIN;Acc:ZDB-GENE-091204-346]
16. MCC ENSDARG00000105237 4 1.593 - 0.865 - - - - - 0.728 - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
17. MPPED1 ENSDARG00000088181 117 1.569 - 0.801 - - - 0.768 - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
18. ebpl ENSDARG00000036636 79 1.565 - 0.852 - - - 0.713 - - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
19. BX324215.2 BX324215.2 2 1.559 - - - - - 0.768 0.791 - -
20. IQUB ENSDARG00000061899 91 1.543 - - 0.835 - - 0.708 - - - IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
21. snx33 ENSDARG00000014954 45 1.54 - 0.768 - - - - 0.772 - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
22. gpr155a ENSDARG00000090804 27 1.54 - - - - - 0.768 0.772 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
23. runx3 ENSDARG00000052826 247 1.522 - - 0.740 - - - 0.782 - - runt-related transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-000605-2]
24. vrk2 ENSDARG00000021547 45 1.518 0.796 - - - - 0.722 - - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
25. zgc:85910 zgc:85910 299 1.431 0.711 0.720 - - - - - - -
26. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 1.000 - - - - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
27. VPS13B VPS13B 1 1 1.000 - - - - - - - -
28. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 1 1.000 - - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
29. si:ch73-127m5.3 si:ch73-127m5.3 1 1 1.000 - - - - - - - -
30. fam129ab ENSDARG00000023053 1 1 1.000 - - - - - - - - family with sequence similarity 129, member Ab [Source:ZFIN;Acc:ZDB-GENE-070912-688]
31. CR847906.1 ENSDARG00000099493 88 1 1.000 - - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
32. KRT18_1 KRT18_1 17 1 1.000 - - - - - - - -
33. si:dkey-167k11.3 si:dkey-167k11.3 3 1 1.000 - - - - - - - -
34. BX897714.3 BX897714.3 3 1 1.000 - - - - - - - -
35. podn ENSDARG00000019025, ENSDARG00000113615 1 1 1.000 - - - - - - - - podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117]
36. zgc:195633_2 34 1 1.000 - - - - - - - - zgc:195633
37. nkiras2_1 ENSDARG00000052594 31 1 1.000 - - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
38. CDHR5 CDHR5 2 1 1.000 - - - - - - - -
39. lpar5b ENSDARG00000068638 2 1 1.000 - - - - - - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
40. CCDC37 CCDC37 10 1 1.000 - - - - - - - -
41. or135-1 ENSDARG00000053648 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 135, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-32]
42. si:ch211-202n12.5 si:ch211-202n12.5 19 1 1.000 - - - - - - - -
43. si:ch211-232m10.6 ENSDARG00000070931 2 1 1.000 - - - - - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
44. GPR137B_1 GPR137B_1 8 1 1.000 - - - - - - - -
45. CR936371.2 ENSDARG00000117302 2 1 1.000 - - - - - - - -
46. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 1.000 - - - - - - - -
47. KCNK7 ENSDARG00000057331 5 1 1.000 - - - - - - - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
48. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 1.000 - - - - - - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
49. gadd45aa ENSDARG00000043581 114 1 1.000 - - - - - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
50. DUSP13_1 DUSP13_1 425 1 1.000 - - - - - - - -
51. cx28.8 ENSDARG00000071042 62 1 1.000 - - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
52. FOXL2 239 1 1.000 - - - - - - - - forkhead box L2, transcript variant X1
53. ADAM12 ENSDARG00000116062 35 1 1.000 - - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
54. si:dkey-163m14.5 si:dkey-163m14.5 1 1 1.000 - - - - - - - -
55. echdc1 68 1 1.000 - - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1
56. zgc:153441 ENSDARG00000054797 9 1 1.000 - - - - - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
57. si:ch73-189n23.1 ENSDARG00000086247 15 1 1.000 - - - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
58. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 1.000 - - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
59. dnm2a ENSDARG00000069937 32 1 1.000 - - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
60. cx30.9 ENSDARG00000070362 17 1 1.000 - - - - - - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
61. zdhhc2 ENSDARG00000034757, ENSDARG00000110118 28 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]
62. BX511182.1 BX511182.1 8 1 1.000 - - - - - - - -
63. BX897671.1 BX897671.1 10 1 1.000 - - - - - - - -
64. CU633479.6 ENSDARG00000116146 4 1 1.000 - - - - - - - -
65. tecta ENSDARG00000059558 15 1 1.000 - - - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
66. CABZ01034707.1 CABZ01034707.1 122 1 1.000 - - - - - - - -
67. ccdc129 37 1 1.000 - - - - - - - - coiled-coil domain containing 129, transcript variant X2
68. klhl32 ENSDARG00000003576 99 1 1.000 - - - - - - - - kelch-like family member 32 [Source:ZFIN;Acc:ZDB-GENE-070209-47]
69. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 1.000 - - - - - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
70. si:dkey-23a23.1 ENSDARG00000094824 1 1 1.000 - - - - - - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
71. C1S_1 C1S_1 11 1 1.000 - - - - - - - -
72. aven ENSDARG00000002894 49 1 1.000 - - - - - - - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
73. ptpn20 ENSDARG00000075459 1 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
74. SLC9A3R2_1 SLC9A3R2_1 28 1 1.000 - - - - - - - -
75. AL935293.1 AL935293.1 2 1 1.000 - - - - - - - -
76. b3gntl1 ENSDARG00000043431 50 1 1.000 - - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
77. rgs9a ENSDARG00000037925 3 1 1.000 - - - - - - - - regulator of G protein signaling 9a [Source:ZFIN;Acc:ZDB-GENE-060929-92]
78. CABZ01046432.1 ENSDARG00000079325 11 1 1.000 - - - - - - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
79. GLIPR1 GLIPR1 37 1 1.000 - - - - - - - -
80. CABZ01072557.1 CABZ01072557.1 9 1 1.000 - - - - - - - -
81. ptpn6_1 ENSDARG00000089043 22 1 1.000 - - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
82. rhoga ENSDARG00000068653 13 1 1.000 - - - - - - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
83. htr6 ENSDARG00000016095 9 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839]
84. gria1b ENSDARG00000032714, ENSDARG00000111658 12 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 1b [Source:ZFIN;Acc:ZDB-GENE-020125-2]
85. CABZ01072037.1 CABZ01072037.1 2 1 1.000 - - - - - - - -
86. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 1.000 - - - - - - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
87. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1 1.000 - - - - - - - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
88. SLC35A3_1 SLC35A3_1 35 1 1.000 - - - - - - - -
89. si:ch211-150j10.4 ENSDARG00000079336 23 1 1.000 - - - - - - - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
90. C25H19orf40 C25H19orf40 17 1 1.000 - - - - - - - -
91. si:ch211-260b17.6 32 1 1.000 - - - - - - - - si:ch211-260b17.6
92. si:dkey-54f18.2 si:dkey-54f18.2 27 1 1.000 - - - - - - - -
93. si:dkey-30f3.2 ENSDARG00000098087 6 1 1.000 - - - - - - - - si:dkey-30f3.2 [Source:ZFIN;Acc:ZDB-GENE-110913-70]
94. oxtrl ENSDARG00000044175 10 1 1.000 - - - - - - - - oxytocin receptor like [Source:ZFIN;Acc:ZDB-GENE-110805-1]
95. gper gper 4 1 1.000 - - - - - - - -
96. ZNF135_3 ZNF135_3 1 1 1.000 - - - - - - - -
97. si:dkey-61p9.11 ENSDARG00000096762, ENSDARG00000110448 2 1 1.000 - - - - - - - - si:dkey-61p9.11 [Source:ZFIN;Acc:ZDB-GENE-041210-242]
98. CABZ01090975.1 CABZ01090975.1 9 1 1.000 - - - - - - - -
99. ZBTB42 ENSDARG00000102761 2 1 1.000 - - - - - - - - zinc finger and BTB domain containing 42 [Source:ZFIN;Acc:ZDB-GENE-130730-2]
100. CU183952.1 CU183952.1 32 1 1.000 - - - - - - - -

There are 1029 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA