Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for onecut1

Gene Name Gene ID Reads Annotation
onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]










Genes with expression patterns similar to onecut1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
2. fyna ENSDARG00000011370 1679 5.032 0.904 0.851 - 0.704 - 0.891 0.911 0.771 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
3. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 4.469 0.879 - - 0.722 0.988 0.926 0.954 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
4. nova2 ENSDARG00000017673 7685 4.395 0.942 0.785 - 0.723 - 0.981 0.964 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
5. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 4.384 0.883 0.887 - 0.724 - 0.931 0.959 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
6. myt1b ENSDARG00000102879 5411 4.349 0.915 0.718 - 0.808 - 0.978 0.930 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
7. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 4.171 0.791 0.758 - - 0.957 0.887 0.778 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
8. syt11a ENSDARG00000057913 1145 4.125 0.790 0.710 0.820 - - 0.849 0.956 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
9. mapk12b ENSDARG00000006409 2246 4.077 0.731 0.701 0.839 - - 0.825 0.981 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
10. slc18a3a ENSDARG00000006356 1285 3.711 0.913 0.836 - - - 0.978 0.984 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
11. pcdh1gc5 ENSDARG00000104826 10052 3.686 0.896 0.902 - - - 0.921 0.967 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
12. gfap ENSDARG00000025301 5584 3.682 0.884 - 0.858 - - 0.953 0.987 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
13. nes ENSDARG00000088805 2710 3.605 0.897 0.785 - - - 0.959 0.964 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
14. stxbp1a ENSDARG00000001994 5154 3.586 - 0.793 - - 0.954 0.856 0.983 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
15. nadl1.1 1200 3.578 0.808 0.833 - - - 0.965 0.972 - - neural adhesion molecule L1.1, transcript variant X1
16. CU928222.1 ENSDARG00000097436 1662 3.578 0.923 0.795 - - - 0.919 0.941 - -
17. neurog1 ENSDARG00000056130 3924 3.569 0.873 0.772 - - - 0.940 0.984 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
18. mir10d-1 mir10d-1 860 3.532 0.847 0.824 - - - 0.923 0.938 - -
19. stx1b ENSDARG00000000503 2724 3.517 0.828 0.779 - - - 0.935 0.975 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
20. si:ch73-21g5.7 ENSDARG00000093156 9412 3.499 0.944 0.737 - - - 0.836 0.982 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
21. dla ENSDARG00000010791 9281 3.497 0.950 0.724 0.844 - - - 0.979 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
22. CHL1 CHL1 1553 3.49 0.883 0.784 - - - 0.921 0.902 - -
23. ELOVL4 ELOVL4 3026 3.483 0.846 0.888 0.837 - - - 0.912 - -
24. sypa ENSDARG00000042974, ENSDARG00000110528 3217 3.478 0.874 0.731 - - - 0.896 0.977 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
25. calca ENSDARG00000056590 150 3.465 0.818 0.809 - - - 0.853 0.985 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
26. TUBA1A ENSDARG00000001889 25294 3.46 0.784 - - 0.731 - 0.977 0.968 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
27. BX957337.1 BX957337.1 1685 3.454 0.838 - - 0.788 - 0.877 0.951 - -
28. SLC5A7 SLC5A7 453 3.451 0.850 0.801 - - - 0.824 0.976 - -
29. AGO1 ENSDARG00000092644 4521 3.451 0.849 0.712 - - - 0.943 0.947 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
30. nhlh2 ENSDARG00000025495 1860 3.451 0.752 - 0.866 - - 0.869 0.964 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
31. pcsk1nl ENSDARG00000076170 1232 3.436 0.822 0.789 - - - 0.850 0.975 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
32. her13 ENSDARG00000007097 2000 3.433 0.915 0.841 - 0.759 - - 0.918 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
33. pax6a ENSDARG00000103379 3061 3.431 0.796 0.744 - - - 0.941 0.950 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
34. cldn5a ENSDARG00000043716 3865 3.39 0.811 - 0.811 - - 0.864 0.904 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
35. clstn1 ENSDARG00000031720 5286 3.39 0.910 - - 0.714 - 0.862 0.904 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
36. nova1 ENSDARG00000020178 4129 3.385 - - - 0.717 - 0.930 0.950 0.788 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
37. SNAP91 ENSDARG00000098809 556 3.379 0.799 0.777 - - - 0.821 0.982 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
38. tubb5 ENSDARG00000037997 18691 3.376 0.784 - 0.900 0.745 - - 0.947 - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
39. atp1a3a ENSDARG00000018259 5393 3.375 0.832 0.714 0.899 - - 0.930 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
40. sox2 ENSDARG00000070913 2763 3.361 0.891 0.818 - 0.703 - - 0.949 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
41. ADAMTS3 ENSDARG00000060127 2839 3.353 0.804 0.805 - - - 0.838 0.906 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
42. her2 ENSDARG00000038205 3219 3.353 0.880 - - 0.723 - 0.781 0.969 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
43. dlb ENSDARG00000004232 5120 3.35 0.879 0.797 0.921 - - - - 0.753 - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
44. stmn2b ENSDARG00000070537 1586 3.346 0.792 0.795 - - - 0.905 0.854 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
45. cadm3 ENSDARG00000057013 1545 3.337 - 0.800 - 0.702 - 0.920 0.915 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
46. wu:fq41a10 wu:fq41a10 7009 3.332 - 0.779 0.890 0.755 - - 0.908 - -
47. dpysl5a ENSDARG00000011141 1827 3.331 0.834 - - - - 0.805 0.968 0.724 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
48. zgc:113531 ENSDARG00000038794 2063 3.331 0.873 0.831 - - - 0.833 0.794 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
49. slc1a2b ENSDARG00000102453 3136 3.329 - 0.733 - 0.770 - 0.879 0.947 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
50. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 3.32 - - 0.708 0.719 - 0.961 0.932 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
51. scrt2 ENSDARG00000056175 4331 3.317 0.728 0.760 - - - 0.913 0.916 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
52. nbeaa ENSDARG00000070080 862 3.314 0.769 - - 0.786 - 0.811 0.948 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
53. ptprnb ENSDARG00000077047 2743 3.312 0.821 0.793 - - - 0.887 0.811 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
54. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 3.308 0.730 0.844 - - - 0.854 0.880 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
55. dpysl3 ENSDARG00000002587 4381 3.306 0.701 0.726 - - - 0.917 0.962 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
56. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 3.304 0.733 - - 0.792 - 0.819 0.960 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
57. sv2c ENSDARG00000059997 592 3.279 0.744 0.766 - - - 0.876 0.893 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
58. dbx2 2971 3.269 0.736 0.756 - - - 0.794 0.983 - - developing brain homeobox 2
59. GLRA3 ENSDARG00000011066 242 3.266 0.871 0.709 - - - 0.703 0.983 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
60. gad2 ENSDARG00000015537 724 3.261 0.839 0.774 - - - 0.832 0.816 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
61. st18 663 3.256 0.736 0.718 - - - 0.864 0.938 - - suppression of tumorigenicity 18, zinc finger
62. stmn1b ENSDARG00000033655 9491 3.255 0.750 - - 0.751 - 0.773 0.981 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
63. sox19b ENSDARG00000040266 532 3.249 0.772 0.702 - - - 0.840 0.935 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
64. rbfox1 ENSDARG00000014746 2808 3.246 0.883 0.708 - - - 0.906 0.749 - - RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
65. slc35g2b ENSDARG00000045447 378 3.237 0.777 0.737 - - - 0.776 0.947 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
66. npas3b npas3b 1446 3.236 0.777 - - 0.750 - 0.759 0.950 - -
67. sv2bb ENSDARG00000060711 196 3.226 0.713 0.741 - - - 0.798 0.974 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
68. amph ENSDARG00000007663 599 3.194 0.706 0.717 - - - 0.824 0.947 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
69. CABZ01029738.1 CABZ01029738.1 327 3.181 0.716 0.748 - - - 0.813 0.904 - -
70. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 3.168 0.743 0.793 - - - - 0.925 0.707 - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
71. coe2 coe2 1633 3.164 - - 0.872 0.732 - 0.858 0.702 - -
72. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 3.129 0.765 - 0.781 - - 0.799 0.784 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
73. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 3.118 0.730 - - - - 0.846 0.786 0.756 - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
74. tfdp2 ENSDARG00000042835 1985 3.101 0.730 0.734 - 0.775 - 0.862 - - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
75. ank2b ENSDARG00000043313 3065 3.002 0.846 0.706 - - - 0.735 0.715 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
76. fabp7a ENSDARG00000007697 5211 2.97 0.709 - - 0.727 - 0.770 0.764 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
77. st3gal2 ENSDARG00000112898 370 2.951 0.754 0.764 - - - 0.721 0.712 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
78. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.863 0.916 - - - - 0.969 0.978 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
79. nrarpb ENSDARG00000018958 6225 2.804 0.884 - - - - 0.951 0.969 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
80. epha4b ENSDARG00000011600 3110 2.787 0.914 - - - - 0.932 0.941 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
81. vim ENSDARG00000010008 3551 2.784 0.949 - - - - 0.972 0.863 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
82. tuba1c ENSDARG00000055216 8384 2.782 0.870 - - - - 0.936 0.976 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
83. chat chat 463 2.78 0.856 - - - - 0.948 0.976 - -
84. EFCC1 ENSDARG00000077826 1359 2.756 0.911 - - - - 0.918 0.927 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
85. tmie ENSDARG00000069423 305 2.729 0.909 - - - - 0.857 0.963 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
86. vgf ENSDARG00000105529 247 2.72 0.828 - - - - 0.937 0.955 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
87. SEMA7A ENSDARG00000078707 465 2.717 0.809 - - - - 0.940 0.968 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
88. plp1a ENSDARG00000103732 3544 2.692 0.828 - - - - 0.884 0.980 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
89. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.687 0.850 - - - - 0.918 0.919 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
90. hmp19 2554 2.687 0.843 - - - - 0.880 0.964 - - HMP19 protein
91. EPB41L1 EPB41L1 1896 2.675 0.812 - - - - 0.908 0.955 - -
92. ckbb ENSDARG00000043257 3503 2.67 0.835 - - - - 0.932 0.903 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
93. itm2ca ENSDARG00000043448 1265 2.668 - 0.742 - - - 0.948 0.978 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
94. irx1b ENSDARG00000056594 2224 2.667 0.815 - - - - 0.896 0.956 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
95. kcnc3a ENSDARG00000055855 1821 2.664 0.781 - - - - 0.921 0.962 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
96. msi1 ENSDARG00000010710 2634 2.662 0.726 - - - - 0.987 0.949 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
97. gap43 ENSDARG00000099744 4114 2.66 - 0.808 - - - 0.899 0.953 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
98. CABZ01111990.1 CABZ01111990.1 4374 2.658 0.795 - - - - 0.890 0.973 - -
99. atp6v0cb ENSDARG00000036577 3472 2.655 0.739 - - - - 0.946 0.970 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
100. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.652 0.895 0.782 - - - - 0.975 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]

There are 2275 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA