Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nyx

Gene Name Gene ID Reads Annotation
nyx ENSDARG00000061791 2 nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]










Genes with expression patterns similar to nyx

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nyx ENSDARG00000061791 2 3 - 1.000 1.000 1.000 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
2. cdx1a ENSDARG00000114554 28 2 - - 1.000 1.000 - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
3. slc5a5 ENSDARG00000005392 6 1.984 - - 0.984 1.000 - - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
4. crygm2d10 ENSDARG00000087765 358 1.77 - 1.000 - 0.770 - - - - - crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
5. BTBD17 BTBD17 53 1.757 - 1.000 - 0.757 - - - - -
6. helt ENSDARG00000056400 482 1.723 - 0.896 - 0.827 - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
7. PARP6 PARP6 119 1.714 - 1.000 - 0.714 - - - - -
8. eif2b5 ENSDARG00000074995 8 1.707 - 1.000 0.707 - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
9. ZDHHC12 ZDHHC12 29 1.672 - - 0.700 0.972 - - - - -
10. lzts1 ENSDARG00000075565 23 1 - 1.000 - - - - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
11. foxg1d ENSDARG00000070053 32 1 - 1.000 - - - - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
12. ppp1r3db ENSDARG00000076248 32 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
13. tacr3a ENSDARG00000075112 1 1 - - - 1.000 - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
14. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -
15. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
16. vwc2 ENSDARG00000076495 22 1 - 1.000 - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
17. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1 - 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
18. zmiz2 ENSDARG00000098683 1 1 - 1.000 - - - - - - - zinc finger, MIZ-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-285]
19. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
20. si:ch211-263m18.4 ENSDARG00000093353 27 1 - 1.000 - - - - - - - si:ch211-263m18.4 [Source:ZFIN;Acc:ZDB-GENE-030131-5341]
21. BX470224.1 ENSDARG00000092793 22 1 - 1.000 - - - - - - -
22. CT955987.1 CT955987.1 9 1 - 1.000 - - - - - - -
23. dnajb2 ENSDARG00000058644 30 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
24. l3mbtl3 ENSDARG00000025983 12 1 - 1.000 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
25. necab1 ENSDARG00000056566, ENSDARG00000111028 26 1 - 1.000 - - - - - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
26. kcnj14 ENSDARG00000075914 38 1 - 1.000 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
27. slc26a6l ENSDARG00000054127 8 1 - - 1.000 - - - - - - solute carrier family 26, member 6, like [Source:ZFIN;Acc:ZDB-GENE-080220-10]
28. CABZ01088718.1 CABZ01088718.1 1 1 - 1.000 - - - - - - -
29. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
30. CR556708.1 ENSDARG00000100565 6 1 - 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
31. rs1 rs1 70 1 - 1.000 - - - - - - -
32. bsk146 ENSDARG00000099069 274 1 - 1.000 - - - - - - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
33. CR376785.2 CR376785.2 175 1 - 1.000 - - - - - - -
34. SACS ENSDARG00000091042 15 1 - 1.000 - - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
35. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
36. CUZD1 CUZD1 2 1 - - - 1.000 - - - - -
37. si:dkey-4m13.3 6 1 - - - 1.000 - - - - - si:dkey-4m13.3
38. btbd3b ENSDARG00000087517 107 1 - 1.000 - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
39. sox8 sox8 109 1 - 1.000 - - - - - - -
40. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
41. ZNF648 ENSDARG00000104823 194 1 - 1.000 - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
42. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
43. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - 1.000 - - - - -
44. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
45. BX901974.1 ENSDARG00000067592 2 1 - - - 1.000 - - - - -
46. si:dkeyp-100a5.2 si:dkeyp-100a5.2 1 1 - - 1.000 - - - - - -
47. c3c c3c 174 1 - 1.000 - - - - - - -
48. si:ch211-214p13.3 ENSDARG00000087403 0 1 - 1.000 - - - - - - - si:ch211-214p13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-779]
49. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
50. si:ch211-276k2.2 4 1 - - - 1.000 - - - - - si:ch211-276k2.2
51. lepa ENSDARG00000091085 11 1 - 1.000 - - - - - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
52. si:dkey-222f2.3 si:dkey-222f2.3 8 1 - 1.000 - - - - - - -
53. PLB1 PLB1 20 1 - - 1.000 - - - - - -
54. CR847504.1 ENSDARG00000102515 29 1 - 1.000 - - - - - - -
55. evlb ENSDARG00000099720 245 1 - 1.000 - - - - - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
56. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - 1.000 - - - - - - -
57. RGS9BP ENSDARG00000086756 65 1 - 1.000 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
58. si:dkey-47k20.6 si:dkey-47k20.6 2 1 - - 1.000 - - - - - -
59. GAS2_1 GAS2_1 16 1 - 1.000 - - - - - - -
60. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
61. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 - 1.000 - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
62. klhl6 ENSDARG00000026990 24 1 - 1.000 - - - - - - - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
63. pappa2 ENSDARG00000076020 89 1 - 1.000 - - - - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
64. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1 - 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
65. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
66. XKR7 ENSDARG00000026333 175 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
67. fbxo41 ENSDARG00000078908 95 1 - 1.000 - - - - - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
68. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 1 - 1.000 - - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
69. sprn ENSDARG00000056004 128 1 - 1.000 - - - - - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
70. CT737190.1 ENSDARG00000091514 1 1 - - - 1.000 - - - - - si:dkey-286h2.5 [Source:NCBI gene;Acc:100536662]
71. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
72. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
73. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
74. TMCC1_1 TMCC1_1 1 1 - - - 1.000 - - - - -
75. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
76. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
77. CR352260.1 CR352260.1 11 1 - 1.000 - - - - - - -
78. rhobtb2b ENSDARG00000089340 4 1 - 1.000 - - - - - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
79. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
80. mettl11b ENSDARG00000042033 176 1 - 1.000 - - - - - - - methyltransferase like 11B [Source:ZFIN;Acc:ZDB-GENE-081104-175]
81. ENSDARG00000091313 ENSDARG00000091313 6 1 - - 1.000 - - - - - -
82. si:ch211-255a21.4 si:ch211-255a21.4 26 1 - 1.000 - - - - - - -
83. si:dkey-242g16.2 ENSDARG00000069377 7 1 - 1.000 - - - - - - - si:dkey-242g16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8324]
84. SERINC3 SERINC3 21 1 - 1.000 - - - - - - -
85. CABZ01074423.1 CABZ01074423.1 8 1 - 1.000 - - - - - - -
86. dusp3b ENSDARG00000060130 3 1 - 1.000 - - - - - - - dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
87. NRSN2 NRSN2 57 1 - 1.000 - - - - - - -
88. CRYGM4 ENSDARG00000008219 1 1 - - - 1.000 - - - - - crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
89. sgms2 57 1 - 1.000 - - - - - - - sphingomyelin synthase 2, transcript variant X1
90. adora1 adora1 149 1 - 1.000 - - - - - - -
91. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
92. thada ENSDARG00000053082, ENSDARG00000112761 2 1 - 1.000 - - - - - - - thyroid adenoma associated [Source:ZFIN;Acc:ZDB-GENE-050320-49]
93. bcl11ba ENSDARG00000062510 169 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
94. CABZ01089980.1 ENSDARG00000117446 16 1 - 1.000 - - - - - - -
95. rxfp3.3a3 ENSDARG00000069246 5 1 - - 1.000 - - - - - - relaxin family peptide receptor 3.3a3 [Source:ZFIN;Acc:ZDB-GENE-050419-246]
96. PPFIA3 ENSDARG00000077053 310 1 - 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
97. si:ch211-173p18.3_1 ENSDARG00000035821 36 1 - 1.000 - - - - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
98. CT867973.1 ENSDARG00000114801 13 1 - 1.000 - - - - - - -
99. fam175b fam175b 37 1 - 1.000 - - - - - - -
100. si:ch211-213i16.4 8 1 - 1.000 - - - - - - - si:ch211-213i16.4, transcript variant X1

There are 539 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA