Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nup98

Gene Name Gene ID Reads Annotation
nup98 ENSDARG00000074955 3998 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]










Genes with expression patterns similar to nup98

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nup98 ENSDARG00000074955 3998 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
2. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 2.617 - - - - 0.837 - 0.960 0.820 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
3. arpc4 ENSDARG00000054063 6150 2.604 - - - 0.945 0.883 - 0.776 - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
4. kmt2bb ENSDARG00000060697 5230 2.574 - - - - 0.852 - 0.994 0.728 - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
5. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 2.571 - 0.777 - - 0.811 - - - 0.983 regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
6. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 2.53 - 0.726 - 0.979 0.825 - - - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
7. PPP1R8 PPP1R8 1897 2.496 - - - 0.992 - 0.745 - 0.759 -
8. si:dkey-19e4.5 ENSDARG00000089886 2562 2.49 - 0.771 - - 0.976 - - 0.743 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
9. gas1a ENSDARG00000077298 10891 2.488 - - - 0.907 0.807 - 0.774 - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
10. ANKRD11 ENSDARG00000051886 10024 2.388 - 0.796 - 0.880 - 0.712 - - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
11. pak2b ENSDARG00000018476 4331 2.333 - 0.770 - - - 0.802 - 0.761 - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
12. tsen2 ENSDARG00000091851 1467 1.986 - - - 0.988 - - - - 0.998 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
13. strap ENSDARG00000007405 6426 1.978 - - - 0.990 - - 0.988 - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
14. hddc3 ENSDARG00000020473 2814 1.975 - - - - - - 0.977 - 0.998 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
15. brd7 ENSDARG00000008380 3654 1.972 - - - 0.988 0.984 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
16. sh3bp5lb 1090 1.962 - - - 0.983 0.979 - - - - SH3-binding domain protein 5-like, b
17. mcrs1 ENSDARG00000020840 3232 1.961 - - - 0.991 0.970 - - - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
18. unc5b ENSDARG00000033327 3432 1.957 - - - 0.988 0.969 - - - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
19. gnao1a ENSDARG00000016676 8184 1.942 - - - 0.958 0.984 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
20. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.935 - - - 0.978 - - 0.957 - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
21. dag1 ENSDARG00000016153 10886 1.934 - - - 0.964 - - 0.970 - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
22. sap30l ENSDARG00000030213 5795 1.924 - - - 0.976 0.948 - - - - sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
23. hoxa10b ENSDARG00000031337 3992 1.92 - - - - - - 0.936 - 0.984 homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
24. eif3s10 ENSDARG00000076815 10822 1.911 - - - 0.941 - - 0.970 - - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
25. pfdn1 ENSDARG00000014536 6969 1.91 - - - 0.976 - - 0.934 - - prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
26. arrb2b ENSDARG00000011545 3126 1.899 - - - - 0.935 - 0.964 - - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
27. anxa4 ENSDARG00000036456 3332 1.864 - - - - 0.953 - 0.911 - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
28. edf1 ENSDARG00000009950 10518 1.864 - - - 0.946 0.918 - - - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
29. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.859 - - - 0.922 - - - - 0.937 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
30. sepw2a 8597 1.855 - - - 0.980 - - 0.875 - - selenoprotein W, 2a
31. arpp19b ENSDARG00000039880 4823 1.854 - - - 0.978 0.876 - - - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
32. rcn1 ENSDARG00000070006 8455 1.845 - - - - 0.936 - 0.909 - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
33. rrp7a ENSDARG00000098934 1123 1.837 - - - - 0.840 - 0.997 - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
34. src ENSDARG00000008107 3643 1.825 - - - - 0.838 - 0.987 - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
35. cdc42bpb ENSDARG00000019383 5976 1.824 - - - - - - 0.842 - 0.982 CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
36. ccnb1 ENSDARG00000051923 3226 1.82 - - - - 0.986 - 0.834 - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
37. sulf2l sulf2l 4980 1.813 - 0.825 - 0.988 - - - - -
38. nrf1 ENSDARG00000000018 4683 1.807 - 0.822 - - - - 0.985 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
39. taldo1 ENSDARG00000103369 3804 1.794 - - - 0.974 - - 0.820 - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
40. fkbp8 ENSDARG00000001734 1709 1.787 - 0.793 - - - - 0.994 - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
41. myh10 ENSDARG00000000103 7522 1.777 - - - - - 0.787 - - 0.990 myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
42. dnttip2 ENSDARG00000057648 2381 1.772 - - - 0.987 - - - 0.785 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
43. ino80c ENSDARG00000055719 1512 1.769 - 0.772 - - - - 0.997 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
44. acsbg2 ENSDARG00000004094 2445 1.766 - 0.801 - - - - 0.965 - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
45. hgs ENSDARG00000020960 3574 1.765 - 0.797 - - 0.968 - - - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
46. cdc34b ENSDARG00000012627 3879 1.763 - 0.789 - 0.974 - - - - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
47. cdca7a ENSDARG00000077620 9345 1.761 - - - - - 0.802 0.959 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
48. C24H7orf50 1417 1.753 - 0.755 - - - - - - 0.998 chromosome 24 C7orf50 homolog, transcript variant X2
49. NRD1 NRD1 3486 1.749 - - - - - - - 0.751 0.998
50. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.741 0.762 - - 0.979 - - - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
51. dhx15 ENSDARG00000015392 7496 1.741 - - - - 0.791 - 0.950 - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
52. timm8b ENSDARG00000055708 7291 1.738 - - - 0.943 0.795 - - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
53. rb1 ENSDARG00000006782 1445 1.733 - - - 0.991 - - - 0.742 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
54. kdm1a ENSDARG00000060679 6152 1.73 - - - - - - - 0.744 0.986 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
55. Sep-12 Sep-12 1828 1.729 - - - - - 0.756 0.973 - -
56. ndufs6 ENSDARG00000056583 7220 1.727 - 0.755 - 0.972 - - - - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
57. gon4l ENSDARG00000005867 982 1.725 - - - - 0.981 0.744 - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
58. adi1 ENSDARG00000020448 1402 1.724 - 0.748 - - 0.976 - - - - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
59. GRB10 GRB10 1496 1.718 - 0.735 - - - - 0.983 - -
60. dkc1 ENSDARG00000016484 7088 1.715 - - - 0.929 0.786 - - - - dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
61. mier1a ENSDARG00000041072 1690 1.715 - - - - 0.967 - - 0.748 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
62. zgc:110540 ENSDARG00000054929 2154 1.712 - - - 0.976 - 0.736 - - - zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
63. kdm6bb ENSDARG00000056929 4807 1.711 - - - 0.988 - 0.723 - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
64. ncaph2 ENSDARG00000033757 1042 1.709 - - - - 0.985 - - 0.724 - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
65. parvaa ENSDARG00000043710 3495 1.708 - 0.885 - - - - 0.823 - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
66. gapdhs ENSDARG00000039914 8760 1.707 - 0.740 - - - - 0.967 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
67. cacna1ba ENSDARG00000021735 870 1.707 - 0.711 - - - - 0.996 - - calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
68. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.705 - 0.743 - - - - - - 0.962 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
69. ppm1ab ENSDARG00000043250 772 1.703 - - - - - - 0.995 0.708 - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
70. alcamb ENSDARG00000058538 5672 1.702 - 0.718 - 0.984 - - - - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
71. tmem115 ENSDARG00000055763 1824 1.701 - 0.715 - - - - 0.986 - - transmembrane protein 115 [Source:ZFIN;Acc:ZDB-GENE-050913-157]
72. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.701 - 0.711 - - - - - - 0.990 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
73. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.699 - - - 0.947 - 0.752 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
74. cnn3b ENSDARG00000029856 4807 1.699 - - - - 0.980 0.719 - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
75. sh3gl3a ENSDARG00000013360 3602 1.699 - - - 0.986 - - - 0.713 - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
76. pdcd10b ENSDARG00000012591 3395 1.697 - - - - - 0.701 0.996 - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
77. FBLIM1 ENSDARG00000071558 1793 1.695 - 0.771 - - 0.924 - - - - filamin binding LIM protein 1 [Source:ZFIN;Acc:ZDB-GENE-061013-662]
78. xpot ENSDARG00000099652 3026 1.695 - - 0.715 0.980 - - - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
79. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.693 - 0.726 - 0.967 - - - - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
80. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.689 - - - - 0.927 0.762 - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
81. adh8b ENSDARG00000024278, ENSDARG00000116820 8008 1.686 - - - 0.967 - - 0.719 - - alcohol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-030529-2]
82. utp3 ENSDARG00000056720 922 1.684 - - - - 0.979 - - 0.705 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
83. taf11 ENSDARG00000037855 2624 1.683 - - - - 0.969 0.714 - - - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
84. sh3bgrl3 ENSDARG00000098075 3071 1.679 - - - - - 0.701 0.978 - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
85. tcea1 ENSDARG00000003531 2912 1.679 - 0.729 - - 0.950 - - - - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
86. lmnb2 ENSDARG00000101624 11304 1.669 - - - - 0.926 - - 0.743 - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
87. sdc4 ENSDARG00000059906 10105 1.667 - 0.748 - - 0.919 - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
88. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.66 - 0.870 - - 0.790 - - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
89. ufm1 ENSDARG00000043857 4152 1.66 - 0.748 - - 0.912 - - - - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
90. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.659 - 0.711 - - - - 0.948 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
91. cldn12 ENSDARG00000003927 2024 1.656 - - - - 0.930 0.726 - - - claudin 12 [Source:ZFIN;Acc:ZDB-GENE-010328-14]
92. zgc:101846 15202 1.646 - - - 0.837 - - 0.809 - - zgc:101846
93. bc2 5213 1.645 - 0.718 - - - - 0.927 - - putative breast adenocarcinoma marker
94. flrt3 ENSDARG00000076895 3516 1.639 - - - - 0.836 - - 0.803 - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
95. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.631 - 0.735 - - - - 0.896 - -
96. ppat ENSDARG00000004517 3349 1.627 - - - - 0.924 - 0.703 - - phosphoribosyl pyrophosphate amidotransferase [Source:ZFIN;Acc:ZDB-GENE-041210-323]
97. aldh6a1 ENSDARG00000053485 7744 1.615 - 0.791 - - 0.824 - - - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
98. cbx5 ENSDARG00000061187 24026 1.614 - - - 0.709 - - - - 0.905 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
99. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.609 - 0.721 - - 0.888 - - - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
100. rhoaa ENSDARG00000026845 6900 1.607 - - - - - 0.725 0.882 - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]

There are 1307 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA