Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nup88

Gene Name Gene ID Reads Annotation
nup88 ENSDARG00000003235, ENSDARG00000111135 1114 nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]










Genes with expression patterns similar to nup88

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
2. si:ch73-173m3.3 si:ch73-173m3.3 425 2.54 - - 0.878 - - 0.907 - 0.755 -
3. slc25a42 ENSDARG00000099368 2420 2.323 - - 0.764 - - 0.793 0.766 - - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
4. arhgap29b ENSDARG00000017748 812 1.837 - - 0.892 - - 0.945 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
5. SCARF2 1117 1.834 - - 0.911 - - 0.923 - - - scavenger receptor class F, member 2
6. C3H16orf58 C3H16orf58 487 1.799 - - 0.902 - - 0.897 - - -
7. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.798 - - - - - 0.974 - 0.824 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
8. mesdc2 776 1.798 - - - - - 0.958 0.840 - - mesoderm development candidate 2, transcript variant X2
9. mir203b 1077 1.795 - 0.842 - - - 0.953 - - - microRNA 203b
10. C18H11orf58 C18H11orf58 1293 1.784 - - 0.901 - - - - 0.883 -
11. cnot8 ENSDARG00000020043 866 1.781 - - - - - 0.917 0.864 - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
12. xrcc1 ENSDARG00000009494 1346 1.769 - - - 0.828 - 0.941 - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
13. apeh ENSDARG00000008703 694 1.764 - - - - - 0.919 0.845 - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
14. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.751 - - 0.858 - - 0.893 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
15. rprd2a ENSDARG00000058089 743 1.743 - - - - - 0.944 - 0.799 - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
16. TRIP10 TRIP10 1079 1.742 - - 0.907 - - 0.835 - - -
17. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.739 - - 0.910 - - 0.829 - - -
18. tacc3 ENSDARG00000005454 2305 1.733 - - 0.804 - - 0.929 - - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
19. C13H4orf32 C13H4orf32 174 1.726 - - - - - 0.922 0.804 - -
20. clk4b ENSDARG00000005908 915 1.714 - - - - - 0.936 0.778 - - CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
21. lats1 ENSDARG00000003751 448 1.711 - - - - - 0.913 0.798 - - large tumor suppressor kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050523-2]
22. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.71 - - - - - 0.925 0.785 - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
23. s100z ENSDARG00000038729 442 1.706 - - - - - 0.869 0.837 - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
24. maff ENSDARG00000028957, ENSDARG00000111050 1809 1.689 - 0.742 - - - 0.947 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F [Source:ZFIN;Acc:ZDB-GENE-040426-1280]
25. hccs hccs 1758 1.688 - - 0.838 - - - - 0.850 -
26. BX649282.1 ENSDARG00000105704 347 1.68 - - - - - 0.944 - 0.736 -
27. rabep2 ENSDARG00000061213 465 1.678 - - - - - 0.934 0.744 - - rabaptin, RAB GTPase binding effector protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-572]
28. crybb3 ENSDARG00000041301 48 1.678 - 0.735 - - - 0.943 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
29. F8A3 F8A3 646 1.673 - - 0.914 - - - 0.759 - -
30. il2rb ENSDARG00000075720 116 1.668 - 0.760 0.908 - - - - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
31. acn9 acn9 520 1.667 - - - 0.743 - 0.924 - - -
32. SEC16A 1707 1.663 - - 0.850 - - - 0.813 - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X3
33. CCK CCK 1826 1.658 - 0.749 - - - 0.909 - - -
34. csnk1g2a ENSDARG00000005458 2917 1.651 - - - - - 0.929 0.722 - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
35. mxd3 ENSDARG00000098350 3040 1.65 - - 0.772 - - 0.878 - - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
36. trappc2 ENSDARG00000097660 760 1.649 - - 0.878 - - - 0.771 - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
37. ankrd39 ENSDARG00000041350 73 1.646 - - - - - 0.942 0.704 - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
38. c1qtnf3 c1qtnf3 387 1.644 - 0.748 - - - 0.896 - - -
39. wnt9b ENSDARG00000037889 768 1.644 - 0.807 - - - 0.837 - - - wingless-type MMTV integration site family, member 9B [Source:ZFIN;Acc:ZDB-GENE-080201-1]
40. vps36 ENSDARG00000057021 636 1.642 - - - - - 0.925 0.717 - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
41. CACUL1 ENSDARG00000021885 691 1.642 - - - - - 0.909 0.733 - - CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
42. bola1 ENSDARG00000039915 658 1.637 - - - - - - 0.826 0.811 - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
43. tmem170a ENSDARG00000056628, ENSDARG00000111549 737 1.637 - 0.726 - - - 0.911 - - - transmembrane protein 170A [Source:ZFIN;Acc:ZDB-GENE-040426-1622]
44. ppp1r12a ENSDARG00000010784 4333 1.636 - - - - - 0.893 0.743 - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
45. adam17a ENSDARG00000043213 1305 1.636 - 0.825 - - - 0.811 - - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
46. med31 ENSDARG00000008020 4161 1.634 - - 0.822 - - 0.812 - - - mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
47. ptgs2b ENSDARG00000010276 692 1.631 - 0.753 - - - 0.878 - - - prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
48. CABZ01083862.1 ENSDARG00000106989 779 1.627 - 0.731 0.896 - - - - - - zinc finger protein 821 [Source:NCBI gene;Acc:571740]
49. psmb6 ENSDARG00000002240 8015 1.626 - - - - - 0.917 - - 0.709 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
50. ralgps2 ENSDARG00000026519 1610 1.623 - - 0.808 - - - - 0.815 - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
51. TSTD1 TSTD1 608 1.618 - 0.762 0.856 - - - - - -
52. cdc20 ENSDARG00000100741 3264 1.618 - - - - - 0.909 - 0.709 - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
53. map3k7 ENSDARG00000020469 2845 1.618 - - 0.908 - - - - 0.710 - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
54. fgfbp1 fgfbp1 445 1.616 - - - - - 0.881 0.735 - -
55. BX649554.3_1 BX649554.3_1 1071 1.612 - - 0.906 - - - 0.706 - -
56. parp16 ENSDARG00000018593 873 1.612 - 0.715 0.897 - - - - - - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
57. gna13b ENSDARG00000037924 1963 1.605 - 0.733 - - - - - 0.872 - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
58. sqrdl 1598 1.604 - - 0.850 - - - 0.754 - - sulfide quinone reductase-like (yeast), transcript variant X2
59. ERO1LB ERO1LB 1433 1.602 - - 0.839 - - - - 0.763 -
60. srek1ip1 ENSDARG00000043728 985 1.595 - - - - - 0.877 0.718 - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
61. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.594 - - 0.706 - - 0.888 - - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
62. mdm4 ENSDARG00000057513 1954 1.593 - - 0.823 - - 0.770 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
63. C8H17orf59 C8H17orf59 494 1.59 - 0.765 - - - - - 0.825 -
64. nufip2 ENSDARG00000069066 3965 1.59 - - 0.842 - - 0.748 - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
65. dusp7 ENSDARG00000101413 1307 1.588 - 0.745 - - - 0.843 - - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
66. prkcda ENSDARG00000009208 1508 1.583 - 0.725 - - - 0.858 - - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
67. dpp3 ENSDARG00000020676 2393 1.583 - - 0.825 - - 0.758 - - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
68. setd8b 2528 1.571 - - - 0.730 - 0.841 - - - SET domain containing (lysine methyltransferase) 8b
69. atg5 ENSDARG00000023396 1726 1.559 - - - - - 0.792 0.767 - - ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
70. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.556 - - - - - 0.851 0.705 - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
71. rhbdd2 ENSDARG00000092463 937 1.555 - 0.717 - - - - - 0.838 - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
72. itpkca ENSDARG00000002994 710 1.547 - - - - - 0.749 - 0.798 - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
73. brd8 ENSDARG00000025071 2605 1.545 - - - - - 0.824 0.721 - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
74. TTF1_4 TTF1_4 504 1.543 - 0.718 - - - - - 0.825 -
75. si:ch211-191j22.3 ENSDARG00000095459 959 1.542 - 0.720 - - - 0.822 - - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
76. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.529 - - 0.814 - - 0.715 - - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
77. spcs3 ENSDARG00000089976 2469 1.527 - 0.807 - - - - 0.720 - - signal peptidase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2206]
78. srsf1b ENSDARG00000017843 2760 1.527 - 0.726 - - - - 0.801 - - serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
79. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.512 - - 0.809 - - 0.703 - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
80. kcnj13 ENSDARG00000043443 700 1.509 - - - - - 0.804 - 0.705 - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
81. mrpl3 ENSDARG00000103318 2308 1.504 - - 0.790 - - 0.714 - - - mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
82. ada ENSDARG00000003113 228 1.501 - - - - - - 0.702 0.799 - adenosine deaminase [Source:ZFIN;Acc:ZDB-GENE-040718-393]
83. CABZ01005649.2 CABZ01005649.2 715 1.498 - 0.780 - - - - 0.718 - -
84. polr3glb ENSDARG00000013734 1199 1.498 - - - 0.754 - - 0.744 - - polymerase (RNA) III (DNA directed) polypeptide G like b [Source:ZFIN;Acc:ZDB-GENE-041010-32]
85. psenen ENSDARG00000068698 2777 1.483 - 0.755 0.728 - - - - - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
86. ptpn23a ENSDARG00000070124 1206 1.474 0.732 - - - - 0.742 - - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
87. tacc1 ENSDARG00000073753 1127 1.451 - 0.734 - - - - 0.717 - - transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
88. chst10 ENSDARG00000031632 461 1.444 - 0.734 - 0.710 - - - - - carbohydrate sulfotransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040808-40]
89. dmbx1b ENSDARG00000002510 351 1.439 - 0.720 - - - - 0.719 - - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
90. tmprss4a ENSDARG00000103117 841 1.435 - 0.713 - - - - - 0.722 - transmembrane serine protease 4a [Source:ZFIN;Acc:ZDB-GENE-061103-631]
91. arrdc2 ENSDARG00000020761 621 1.418 - 0.712 - - - - - 0.706 - arrestin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7146]
92. rab11al ENSDARG00000014340 2116 1.415 - - 0.710 - - 0.705 - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
93. tmem39a ENSDARG00000102746 900 1.406 0.701 0.705 - - - - - - - transmembrane protein 39A [Source:ZFIN;Acc:ZDB-GENE-030131-1928]
94. zgc:175214 ENSDARG00000022891 1013 0.977 - - - - - 0.977 - - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
95. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 0.975 - - - - - 0.975 - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
96. itsn1 ENSDARG00000000086 684 0.973 - - - - - 0.973 - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
97. cdkn2c ENSDARG00000057610 179 0.971 - - - - - 0.971 - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
98. elp3 ENSDARG00000042005 936 0.971 - - - - - 0.971 - - - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
99. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.971 - - - - - 0.971 - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
100. BX321921.1 BX321921.1 525 0.97 - - - - - 0.970 - - -

There are 1624 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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