Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nup50

Gene Name Gene ID Reads Annotation
nup50 ENSDARG00000017454 4425 nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]










Genes with expression patterns similar to nup50

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nup50 ENSDARG00000017454 4425 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
2. SENP1 SENP1 1122 2.606 - 0.926 0.721 - 0.959 - - - -
3. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 2.527 - 0.845 - - 0.894 - 0.788 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
4. ylpm1 ENSDARG00000043680 7676 2.484 - - 0.792 - 0.721 - - - 0.971 YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
5. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.482 - - - - - 0.737 - 0.767 0.978 HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
6. nhp2 ENSDARG00000069422 9925 2.416 - 0.903 - 0.752 - - 0.761 - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
7. Sep-02 Sep-02 10074 2.379 - 0.907 - - - 0.733 0.739 - -
8. jarid2b ENSDARG00000062268 2206 2.345 - 0.934 0.709 0.702 - - - - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
9. rbb4 rbb4 15541 2.227 - - 0.742 - - - 0.766 0.719 -
10. elof1 ENSDARG00000099453 6176 2.196 - - 0.734 0.716 - - 0.746 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
11. cenpf ENSDARG00000055133 5267 1.936 - - - - 0.942 - - - 0.994 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
12. gpx4b ENSDARG00000076836 8085 1.903 - 0.911 - - - - - - 0.992 glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
13. C2H1orf123 C2H1orf123 2344 1.867 - 0.923 - - 0.944 - - - -
14. mcts1 ENSDARG00000025972 4662 1.866 - 0.936 - - 0.930 - - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
15. NDNF ENSDARG00000062936 7287 1.862 - 0.874 - - - - - - 0.988 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
16. naa15a ENSDARG00000003213 5889 1.856 - 0.905 - - 0.951 - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
17. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.837 - 0.871 - - 0.966 - - - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
18. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.824 - 0.906 - - 0.918 - - - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
19. uqcrfs1_1 ENSDARG00000007745 2687 1.803 - 0.916 - - - - 0.887 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
20. SRGAP3 ENSDARG00000060309 5353 1.766 - - 0.799 - 0.967 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
21. mtfr1l ENSDARG00000003940, ENSDARG00000111141 3047 1.766 - 0.945 - - - - - 0.821 - mitochondrial fission regulator 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-6228]
22. seh1l ENSDARG00000004280 2915 1.763 - 0.942 - - - - 0.821 - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
23. supt6h ENSDARG00000006524 3221 1.754 - - - - 0.962 - 0.792 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
24. abi1a ENSDARG00000010155 5631 1.753 - 0.860 - - 0.893 - - - - abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
25. AL935186.4 ENSDARG00000110268 1701 1.744 - 0.814 - - 0.930 - - - -
26. axin2 ENSDARG00000100149 4223 1.74 - - - - 0.929 - - 0.811 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
27. rfc1 ENSDARG00000054799 1416 1.738 - - - 0.780 0.958 - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
28. atp1b3a ENSDARG00000015790 12310 1.731 - 0.766 - - - - - - 0.965 ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
29. ebna1bp2 ENSDARG00000054980 4621 1.729 - - - - 0.921 - 0.808 - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
30. magi1b ENSDARG00000003169 2056 1.725 - 0.933 - - - 0.792 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
31. cdc42bpb ENSDARG00000019383 5976 1.724 - 0.850 - - 0.874 - - - - CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
32. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 1.722 - - 0.757 - 0.965 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
33. cuedc2 ENSDARG00000039365 484 1.722 - - - - 0.956 - - 0.766 - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
34. bsdc1 ENSDARG00000052623, ENSDARG00000116408 1987 1.72 - 0.945 - - - 0.775 - - - BSD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040905-1]
35. zic5 ENSDARG00000016022 1034 1.711 - - - - 0.963 - - 0.748 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
36. pogza ENSDARG00000054778 1495 1.709 - 0.927 - - - - - 0.782 - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
37. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.706 - - - 0.733 0.973 - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
38. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.7 - - - - - - 0.723 - 0.977 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
39. pdhb ENSDARG00000021346 9088 1.699 - 0.828 - - 0.871 - - - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
40. ppp1cc 2361 1.696 - 0.904 - - - - 0.792 - - protein phosphatase 1, catalytic subunit, gamma isozyme
41. phf23a ENSDARG00000030887, ENSDARG00000115791 1918 1.694 - 0.945 - - - - - 0.749 - PHD finger protein 23a [Source:ZFIN;Acc:ZDB-GENE-050320-67]
42. lsm14ab ENSDARG00000100553 3837 1.692 - - - - 0.960 - - 0.732 - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
43. kdm1a ENSDARG00000060679 6152 1.686 - - - - 0.912 - - 0.774 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
44. mtm1 ENSDARG00000037560 1086 1.677 - 0.932 - - - - 0.745 - - myotubularin 1 [Source:ZFIN;Acc:ZDB-GENE-051113-128]
45. znf865 ENSDARG00000036698 15532 1.675 - - - 0.729 0.946 - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
46. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.673 - - - - 0.890 0.783 - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
47. eif1b ENSDARG00000012688 34711 1.671 - 0.836 - - - - - - 0.835 eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
48. mrrf ENSDARG00000034174, ENSDARG00000115754 791 1.671 - - - - 0.946 - - 0.725 - mitochondrial ribosome recycling factor [Source:ZFIN;Acc:ZDB-GENE-040704-12]
49. nckap1 ENSDARG00000060853 3540 1.669 - - - - 0.945 - 0.724 - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
50. rbm4.2 ENSDARG00000055080 5241 1.667 - - 0.747 - 0.920 - - - - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
51. fen1 ENSDARG00000011404 3358 1.665 - - 0.718 - 0.947 - - - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
52. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.663 - 0.936 0.727 - - - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
53. srsf11 ENSDARG00000098574 12801 1.663 - 0.907 - - - - 0.756 - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
54. ephb4a ENSDARG00000100725 1749 1.662 - - - - 0.958 - - 0.704 - eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
55. znf503 ENSDARG00000018492 5974 1.66 0.747 0.913 - - - - - - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
56. csnk1da ENSDARG00000008370 3469 1.659 - 0.890 - - - - 0.769 - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
57. eif5b ENSDARG00000016548 3972 1.657 - - 0.715 - 0.942 - - - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
58. tmem30aa ENSDARG00000030236 2842 1.655 - 0.945 - - - - - 0.710 - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
59. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.65 - 0.938 - - - 0.712 - - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
60. cpt1a cpt1a 674 1.65 - 0.934 - - - - - 0.716 -
61. brd3b ENSDARG00000100129 6387 1.65 - - - 0.726 0.924 - - - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
62. mxd3 ENSDARG00000098350 3040 1.642 - 0.908 - - - - - 0.734 - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
63. znf346 ENSDARG00000060695 3942 1.638 - 0.906 - - - - 0.732 - - zinc finger protein 346 [Source:ZFIN;Acc:ZDB-GENE-070209-152]
64. BTBD2 BTBD2 610 1.63 - 0.923 - - - 0.707 - - -
65. lrrc40 ENSDARG00000017708 1156 1.629 - - - - 0.875 - - 0.754 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
66. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.621 - - 0.756 - 0.865 - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
67. lrpprc ENSDARG00000043970 3847 1.62 - - - - 0.877 0.743 - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
68. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.618 - - - - 0.875 - 0.743 - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
69. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.613 - - - - - 0.854 - 0.759 - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
70. ncoa5 ENSDARG00000016345 5765 1.609 - 0.876 - - - - 0.733 - - nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
71. BAZ2B BAZ2B 3285 1.607 - 0.905 - - - 0.702 - - -
72. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.596 - - 0.723 - 0.873 - - - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
73. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.594 - 0.880 0.714 - - - - - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
74. snrnp70 ENSDARG00000077126 5921 1.584 - - 0.736 - - 0.848 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
75. rhoaa ENSDARG00000026845 6900 1.577 - 0.840 - - - 0.737 - - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
76. rpl7l1 ENSDARG00000042864 3256 1.565 - - - - 0.836 - - 0.729 - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
77. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.563 - 0.844 - - - - 0.719 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
78. abce1 ENSDARG00000007216 7502 1.562 - - - - 0.853 - 0.709 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
79. caprin1b ENSDARG00000054272 7033 1.556 - 0.844 - - - - 0.712 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
80. plcg1 ENSDARG00000038442 5324 1.552 - - - - - 0.732 - 0.820 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
81. cox7c ENSDARG00000104537 12169 1.552 - - - - 0.848 - 0.704 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
82. TNRC6A ENSDARG00000079688 14433 1.547 - 0.810 0.737 - - - - - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
83. C3H19orf43 C3H19orf43 2961 1.54 - - - - - - 0.741 0.799 -
84. srsf4 ENSDARG00000105293 9657 1.537 - - - - 0.704 - - - 0.833 serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
85. si:ch211-13c6.2 ENSDARG00000027738 1521 1.523 - - - - - 0.724 - 0.799 - si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
86. plagx ENSDARG00000036855 3768 1.521 - - 0.778 - - - - 0.743 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
87. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.519 - 0.785 0.734 - - - - - - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
88. smarce1 ENSDARG00000016871 9628 1.516 0.748 - - 0.768 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
89. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.51 - - 0.742 - - - - 0.768 - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
90. stip1 ENSDARG00000004906 7742 1.508 - 0.773 - - - - 0.735 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
91. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 1.507 - - - 0.779 - 0.728 - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
92. sf1 ENSDARG00000008188 5142 1.5 - - - - - 0.746 0.754 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
93. atpif1a 6030 1.492 - - - - - 0.719 0.773 - - ATPase inhibitory factor 1a
94. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.488 - - - - - 0.747 0.741 - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
95. me3 ENSDARG00000002305 3305 1.483 - - - - - - 0.777 0.706 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
96. SVIL SVIL 2589 1.477 - 0.736 - - - - - 0.741 -
97. mcm7 ENSDARG00000101180 12417 1.468 0.739 - - - - - - 0.729 - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
98. whsc1 1701 1.457 - - 0.719 - - - - 0.738 - Wolf-Hirschhorn syndrome candidate 1
99. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.448 - - - - - 0.701 0.747 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
100. apex1 ENSDARG00000045843 6345 1.446 - - 0.702 0.744 - - - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]

There are 1293 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA