Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nup205

Gene Name Gene ID Reads Annotation
nup205 ENSDARG00000042530, ENSDARG00000114489 2255 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]










Genes with expression patterns similar to nup205

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
2. prmt1 ENSDARG00000010246 11311 3.252 - - 0.799 - - 0.769 0.766 0.918 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
3. tcea1 ENSDARG00000003531 2912 3.109 - - - - - 0.717 0.789 0.814 0.789 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
4. sumo3a ENSDARG00000028119 13447 3.064 - - - 0.756 - 0.776 0.746 - 0.786 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
5. sumo3b ENSDARG00000035993 3414 2.951 - - 0.748 0.709 0.753 - 0.741 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
6. srsf6b ENSDARG00000016783 9926 2.922 - - - - 0.725 0.724 0.718 0.755 - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
7. rbb4 rbb4 15541 2.379 - - 0.780 - - - - 0.816 0.783
8. tmpob ENSDARG00000022978 8121 2.337 - - 0.786 - - - 0.784 - 0.767 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
9. amer2 ENSDARG00000075222 594 2.334 - - - - - - 0.737 0.866 0.731 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
10. rbm25 rbm25 3629 2.33 - - - - - 0.771 0.716 - 0.843
11. snrpd3l ENSDARG00000076283 7655 2.322 - - - 0.744 - - 0.708 - 0.870 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
12. smc1al ENSDARG00000058203 8838 2.318 - - - - - 0.792 0.761 - 0.765 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
13. ubap2 ubap2 4167 2.317 - - - - - - 0.757 0.850 0.710
14. rbmx ENSDARG00000014244 3445 2.311 - 0.768 - - - - 0.767 - 0.776 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
15. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 2.303 - - - - - - 0.723 0.812 0.768 transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
16. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.293 - - 0.733 - - - 0.713 0.847 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
17. bub1bb ENSDARG00000074927 1667 2.289 - - - - - - 0.804 0.735 0.750 BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
18. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 2.284 - - 0.749 - - - 0.778 - 0.757 SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
19. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 2.281 - - - - - 0.728 0.736 0.817 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
20. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.277 - - 0.778 - - 0.711 - - 0.788 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
21. kif11 ENSDARG00000010948 4973 2.26 - 0.726 0.741 - - - - - 0.793 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
22. apex1 ENSDARG00000045843 6345 2.255 - 0.703 - - - - 0.757 0.795 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
23. dlb ENSDARG00000004232 5120 2.255 - - - - 0.725 - - 0.784 0.746 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
24. e2f8 ENSDARG00000057323 1432 2.253 - - 0.775 - - - 0.716 - 0.762 E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
25. ddx39ab ENSDARG00000015111 11619 2.251 - 0.790 - - - - 0.722 - 0.739 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
26. ncapd2 ENSDARG00000005058 2819 2.244 - - 0.749 - 0.712 - 0.783 - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
27. myef2 ENSDARG00000059398 6050 2.231 - - - - 0.719 - 0.784 - 0.728 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
28. parp1 ENSDARG00000019529 6787 2.229 - - 0.704 - 0.752 - - - 0.773 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
29. tma7 ENSDARG00000071670 13372 2.213 - - - - 0.730 - - 0.721 0.762 translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
30. snrpa ENSDARG00000018890 4593 2.209 - 0.758 - - - 0.738 - - 0.713 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
31. whsc1l1 8544 2.203 - - - - 0.753 0.720 - - 0.730 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
32. rtca ENSDARG00000002215 3558 2.189 - - 0.727 0.758 - - - - 0.704 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
33. tgif1 ENSDARG00000059337 4020 2.185 - - 0.705 - - - 0.753 - 0.727 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
34. hmgb3a ENSDARG00000056725 15668 2.179 - - - - - 0.761 0.701 - 0.717 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
35. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.161 - - 0.726 - - - 0.714 - 0.721 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
36. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 2.158 - - - - 0.734 - 0.706 - 0.718 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
37. sae1 ENSDARG00000010487 2028 1.739 - - - 0.850 - - - 0.889 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
38. atf7ip ENSDARG00000069619 5495 1.681 - - - - - - 0.848 0.833 - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
39. C1H4orf27 C1H4orf27 1961 1.679 - - - - - - 0.795 0.884 -
40. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.646 - - - 0.781 - - - 0.865 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
41. zgc:55733 ENSDARG00000103845 1550 1.645 - 0.797 - - - - - 0.848 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
42. sf3a1 ENSDARG00000041887 6702 1.644 - - - - - - - 0.883 0.761 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
43. med22 ENSDARG00000014148 1307 1.639 - - - - - - 0.805 0.834 - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
44. creb1a ENSDARG00000053586 5068 1.631 - - - - - 0.818 - - 0.813 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
45. rnps1 ENSDARG00000116743 9994 1.629 - - 0.763 - - - 0.866 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
46. prnprs3 ENSDARG00000003705 1854 1.629 - - - - - 0.881 0.748 - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
47. msl2a ENSDARG00000038909 1357 1.622 - - - - - 0.800 0.822 - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
48. mcm7 ENSDARG00000101180 12417 1.62 - - - - - - 0.816 0.804 - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
49. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.619 - - - - - - - 0.829 0.790 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
50. emc9 ENSDARG00000034633 686 1.614 - 0.733 - - - - - 0.881 - ER membrane protein complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-040426-693]
51. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.613 - - - 0.789 - - - - 0.824 bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
52. kdm1a ENSDARG00000060679 6152 1.61 - - - - - - 0.755 0.855 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
53. TAF15 ENSDARG00000070019 5102 1.61 - - - - 0.781 - - - 0.829 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
54. unga ENSDARG00000042527 1169 1.609 - - - - - - 0.864 - 0.745 uracil DNA glycosylase a [Source:ZFIN;Acc:ZDB-GENE-040426-900]
55. snrnp70 ENSDARG00000077126 5921 1.602 - - - - - 0.807 - 0.795 - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
56. safb ENSDARG00000020467 5608 1.602 - - - - - - - 0.823 0.779 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
57. u2af1 ENSDARG00000015325 3217 1.589 - - - - - 0.806 - - 0.783 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
58. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.588 - - - - - - - 0.786 0.802 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
59. e2f7 ENSDARG00000008986 1439 1.587 - 0.813 - - - - - 0.774 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
60. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.587 - - - - - - - 0.837 0.750 zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
61. hif1an ENSDARG00000031915 2098 1.587 - - - - - - - 0.881 0.706 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
62. znf280d ENSDARG00000077013 1387 1.581 - - - - - - - 0.835 0.746 zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
63. nucks1a ENSDARG00000078473 28285 1.576 - - 0.789 - - 0.787 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
64. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.573 - - - - - - - 0.814 0.759 polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
65. anp32b ENSDARG00000023330 25013 1.567 - - - - - - 0.832 0.735 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
66. pcdh19 ENSDARG00000034344 2378 1.566 - - - - 0.768 - - - 0.798 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
67. ddx19 ENSDARG00000005699 4602 1.566 - - - - - - 0.745 0.821 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
68. h2afx ENSDARG00000029406 2116 1.563 - 0.806 - - - - 0.757 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
69. mxd3 ENSDARG00000098350 3040 1.563 - - - - - - - 0.821 0.742 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
70. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.558 - - - - - - 0.768 - 0.790 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
71. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.557 - - - - - - 0.847 - 0.710 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
72. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.556 - 0.755 - - - - - - 0.801 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
73. sufu ENSDARG00000056801 1543 1.556 - - - - - - 0.746 0.810 - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
74. mier1a ENSDARG00000041072 1690 1.554 - - 0.730 - - - - 0.824 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
75. rnf2 ENSDARG00000010381 3427 1.553 - - - - - - 0.798 - 0.755 ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
76. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.552 - - - - - - 0.746 - 0.806 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
77. cstf1 ENSDARG00000044820 1663 1.549 - - - - - - 0.731 0.818 - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
78. si:dkey-19e4.5 ENSDARG00000089886 2562 1.548 - - - - - - 0.719 0.829 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
79. ckap5 ENSDARG00000102674 5068 1.547 - - - 0.791 - 0.756 - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
80. emc6 ENSDARG00000035282 4981 1.545 - 0.793 - - - - - 0.752 - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
81. thoc7 ENSDARG00000015394 3824 1.545 - 0.792 - - - 0.753 - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
82. top2a ENSDARG00000024488 4273 1.543 - - - - - - 0.748 - 0.795 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
83. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.543 - - - - - - 0.720 - 0.823 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
84. hnrnpub ENSDARG00000004735 16496 1.541 - - - - - - 0.717 - 0.824 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
85. tfdp1b ENSDARG00000016304 3071 1.537 - 0.704 - - - - 0.833 - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
86. wu:fb17g07 wu:fb17g07 10567 1.536 - - - - - 0.765 0.771 - -
87. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.535 - - - 0.765 - - - - 0.770 cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
88. fam76b ENSDARG00000012432 2722 1.535 - - - - - - 0.810 - 0.725 family with sequence similarity 76, member B [Source:ZFIN;Acc:ZDB-GENE-030131-6955]
89. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 1.535 - - - - - - 0.781 - 0.754 nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
90. uck2a ENSDARG00000006074 1554 1.535 - - - - - - - 0.819 0.716 uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
91. IWS1 2428 1.534 - - - - - - - 0.799 0.735 IWS1, SUPT6H interacting protein, transcript variant X2
92. stmn1a ENSDARG00000004169 21169 1.532 - - - - - - 0.814 - 0.718 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
93. vdac1 ENSDARG00000045132 8051 1.526 - - - - - 0.759 0.767 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
94. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.526 - - - - 0.733 - 0.793 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
95. plcg1 ENSDARG00000038442 5324 1.525 - - - - - 0.741 - 0.784 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
96. znf207a ENSDARG00000015538 2630 1.525 - - - 0.756 - - 0.769 - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
97. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.524 - - - - - 0.789 0.735 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
98. snrpd1 ENSDARG00000011648 8615 1.522 - - - 0.819 - 0.703 - - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
99. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.521 - - - - 0.705 - 0.816 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
100. HNRNPAB HNRNPAB 22267 1.52 - - - - - - 0.736 - 0.784

There are 1327 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA