Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nup188

Gene Name Gene ID Reads Annotation
nup188 ENSDARG00000030022 2398 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]










Genes with expression patterns similar to nup188

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nup188 ENSDARG00000030022 2398 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
2. kpna3 ENSDARG00000052641 5347 2.537 - 0.758 - - - - 0.857 - 0.922 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
3. ppig ENSDARG00000044431 3427 2.526 - - - 0.828 - - 0.717 - 0.981 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
4. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 2.492 - - - 0.753 0.755 - - - 0.984 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
5. si:ch211-10d23.5 ENSDARG00000095510 2632 2.465 - 0.759 - - - - 0.731 - 0.975 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
6. srrm1 ENSDARG00000001244 4972 2.44 - 0.861 - - - 0.711 0.868 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
7. maf1 ENSDARG00000013122 3365 2.437 - - - 0.718 - - 0.751 - 0.968 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
8. sdc4 ENSDARG00000059906 10105 2.434 - 0.880 - - - - 0.806 - 0.748 syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
9. arhgef7b ENSDARG00000073848 1249 2.328 - 0.803 - 0.791 - - 0.734 - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
10. zgc:65772 zgc:65772 2092 2.295 - - - 0.748 0.738 0.809 - - -
11. CABZ01080568.2 CABZ01080568.2 2137 2.29 - 0.784 - 0.730 0.776 - - - -
12. prmt1 ENSDARG00000010246 11311 2.268 - 0.725 - - - - 0.745 - 0.798 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
13. cpsf5 cpsf5 1841 2.267 - 0.775 - - 0.711 0.781 - - -
14. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 2.25 - - 0.705 0.831 - - 0.714 - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
15. max ENSDARG00000024844 6035 2.202 - - - 0.740 0.729 - 0.733 - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
16. tm2d3 ENSDARG00000076618 2310 2.185 - - - - 0.717 - 0.705 - 0.763 TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
17. ptpn23a ENSDARG00000070124 1206 1.824 - - - 0.845 - - - - 0.979 protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
18. ppp2r2d ENSDARG00000102009 5710 1.798 - - - - - - 0.866 - 0.932 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
19. nr2f2 ENSDARG00000040926 5213 1.779 - - - - - - 0.797 - 0.982 nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
20. uhmk1 ENSDARG00000059575 1486 1.774 - 0.803 - - - - - - 0.971 U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
21. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 1.763 - - - 0.788 - - - - 0.975 zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
22. kpna4 ENSDARG00000023190 2505 1.759 - - - - 0.779 - - - 0.980 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
23. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.752 - - - 0.780 - - - - 0.972 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
24. tmpoa ENSDARG00000007315 3638 1.752 - - - - - - 0.789 - 0.963 thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
25. wasf3 wasf3 3287 1.729 - - - - 0.773 - - - 0.956
26. si:ch211-22i13.2 ENSDARG00000043485 4719 1.723 - 0.745 - - - - - - 0.978 si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
27. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.721 - - - 0.741 - - - - 0.980 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
28. exosc1 ENSDARG00000059841 6895 1.712 - 0.858 - - - - - - 0.854 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
29. rcor2 ENSDARG00000008278 1678 1.705 - - - - - - - 0.725 0.980 REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
30. C18H12orf23 C18H12orf23 5362 1.696 - 0.755 - - - - - - 0.941
31. eefsec ENSDARG00000004696 791 1.692 - 0.717 - - - - - - 0.975 eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
32. chd9 ENSDARG00000074498, ENSDARG00000112964 2603 1.684 - 0.799 - - - - 0.885 - - chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]
33. zfand5b ENSDARG00000002271 4145 1.681 - 0.763 - - - - - - 0.918 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
34. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.677 - 0.807 - 0.870 - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
35. FBXL3 FBXL3 1769 1.671 - - - 0.841 - - 0.830 - -
36. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.671 - - - 0.818 - - - - 0.853 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
37. srrm2 ENSDARG00000037965 1967 1.669 - 0.831 - 0.838 - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
38. phrf1 ENSDARG00000075252 1982 1.665 - 0.746 - - - - - - 0.919 PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
39. cpsf3 ENSDARG00000027649 6897 1.663 - - - - - - 0.753 - 0.910 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
40. zcrb1 ENSDARG00000045691 1741 1.659 - - - - - 0.726 - - 0.933 zinc finger CCHC-type and RNA binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-041210-114]
41. snrpe ENSDARG00000033175 7462 1.654 - - - - - - 0.767 - 0.887 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
42. ptbp3 ENSDARG00000043757 6760 1.653 - - - - - - 0.734 - 0.919 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
43. GABARAP GABARAP 8341 1.647 - 0.777 - - - - 0.870 - -
44. pl10 pl10 10795 1.641 - 0.828 - - - - 0.813 - -
45. camlg ENSDARG00000100409 2157 1.629 - 0.828 - - 0.801 - - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
46. prpf8 ENSDARG00000026180 7026 1.619 - - - 0.851 - - - - 0.768 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
47. tpt1 ENSDARG00000092693 1110 1.615 - 0.800 - 0.815 - - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
48. suv39h1b ENSDARG00000055753 1540 1.609 - - - 0.854 - - 0.755 - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
49. ptenb ENSDARG00000056623 5783 1.608 - 0.765 - - - - - - 0.843 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
50. chl1a ENSDARG00000077881 1488 1.604 - 0.758 - - - - - - 0.846 cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
51. ENSDARG00000058760 ENSDARG00000058760 1076 1.601 - 0.809 - 0.792 - - - - -
52. pak2b ENSDARG00000018476 4331 1.599 - 0.840 - - 0.759 - - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
53. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.598 - 0.807 - - - - 0.791 - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
54. tet3 ENSDARG00000062646 6672 1.598 - - - 0.842 - - 0.756 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
55. RBM26 ENSDARG00000104130 1012 1.592 - - - 0.819 - - 0.773 - - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
56. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.591 - - - 0.851 - - 0.740 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
57. DTX4 ENSDARG00000076302 2642 1.588 - - - - 0.791 - - - 0.797 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
58. eif3ea ENSDARG00000090697 14670 1.586 - - - - 0.711 - 0.875 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
59. epb41l4a ENSDARG00000040087 1013 1.58 - - - 0.807 - 0.773 - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
60. ZNF618 ENSDARG00000071469 2347 1.576 - 0.785 - 0.791 - - - - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
61. TAF2 ENSDARG00000102307 1401 1.572 - - - 0.805 - - - 0.767 - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
62. pa2g4b ENSDARG00000070657 7999 1.569 - 0.777 - - - - 0.792 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
63. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.554 - 0.797 - - - - 0.757 - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
64. ubtd2 ENSDARG00000069184, ENSDARG00000109249 1658 1.55 - 0.721 - - - 0.829 - - - ubiquitin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-473]
65. nr2f1b ENSDARG00000017168 1487 1.548 - - - 0.776 0.772 - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
66. efnb2b_1 ENSDARG00000074050 1094 1.548 - - - 0.807 - - 0.741 - - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
67. WAPAL WAPAL 1888 1.547 - - - 0.806 - - 0.741 - -
68. boc ENSDARG00000074335 4832 1.547 - - - - - - 0.752 - 0.795 BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
69. get4 ENSDARG00000024398 1818 1.546 - 0.836 - - 0.710 - - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
70. slbp ENSDARG00000100558 3405 1.545 - - - - 0.785 - 0.760 - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
71. aspm ENSDARG00000103754 5708 1.54 - - - - - - 0.730 - 0.810 abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
72. tfap4 ENSDARG00000103923 2203 1.539 - - - - 0.816 0.723 - - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
73. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.536 - - - - 0.787 0.749 - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
74. sin3ab ENSDARG00000059812 2140 1.535 - - - 0.819 0.716 - - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
75. nsd1a ENSDARG00000060016 2974 1.533 - - - 0.779 - 0.754 - - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
76. si:ch211-288g17.3 ENSDARG00000070959 2425 1.532 - 0.808 - - 0.724 - - - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
77. ubl3b ENSDARG00000021556 1210 1.526 - 0.747 - 0.779 - - - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
78. dctn3 ENSDARG00000041363 3351 1.525 - 0.816 - - - - 0.709 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
79. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.524 - - - 0.804 0.720 - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
80. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.524 - 0.795 - - - - 0.729 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
81. ppp2r1a ppp2r1a 11291 1.52 - 0.771 - - - - 0.749 - -
82. galnt2 ENSDARG00000003829 891 1.515 - 0.729 - 0.786 - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041111-110]
83. ccnt1 ENSDARG00000017525 1888 1.513 - 0.800 - - - 0.713 - - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
84. C1H7orf55 C1H7orf55 2552 1.51 - - - - - - 0.785 0.725 -
85. vps26b ENSDARG00000015823, ENSDARG00000116682 1023 1.509 - 0.728 - 0.781 - - - - - VPS26, retromer complex component B [Source:ZFIN;Acc:ZDB-GENE-040426-2699]
86. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 1.509 - 0.742 - - - - 0.767 - - phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
87. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.508 - 0.712 - - - - 0.796 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
88. nup210 ENSDARG00000063333 995 1.507 - - - 0.738 0.769 - - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
89. sin3b ENSDARG00000062472 2025 1.505 - - - - - 0.741 0.764 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
90. taf6l ENSDARG00000079684 1408 1.505 - 0.770 - - - - 0.735 - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
91. tuba1b ENSDARG00000045367 8485 1.504 - 0.725 - - - - 0.779 - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
92. papolg ENSDARG00000012141 1445 1.503 - - - 0.780 0.723 - - - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
93. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.502 - - - 0.756 0.746 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
94. dek ENSDARG00000070108 2262 1.501 - 0.738 - - 0.763 - - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
95. cxxc1 cxxc1 914 1.501 - - - 0.777 0.724 - - - -
96. smarcb1b ENSDARG00000011594 2413 1.5 - 0.765 - - - - 0.735 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
97. vapal ENSDARG00000115862 3108 1.497 - - - - - 0.705 0.792 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
98. cwc27 ENSDARG00000043727 690 1.497 - - - 0.789 - 0.708 - - - CWC27 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1118]
99. abcg2c ENSDARG00000058574 1261 1.497 - 0.728 - 0.769 - - - - - ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
100. C3H16orf13 C3H16orf13 652 1.494 - 0.774 - 0.720 - - - - -

There are 1533 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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