Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nufip2

Gene Name Gene ID Reads Annotation
nufip2 ENSDARG00000069066 3965 nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]










Genes with expression patterns similar to nufip2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nufip2 ENSDARG00000069066 3965 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
2. sra1 ENSDARG00000053619 2799 3.112 0.735 - 0.761 - - 0.762 - - 0.854 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
3. zgc:91910 ENSDARG00000035678 6172 2.596 - 0.992 - - - - 0.704 - 0.900 zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
4. ppp1r12a ENSDARG00000010784 4333 2.527 - 0.988 - - - 0.810 0.729 - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
5. prkar1aa ENSDARG00000076128 6565 2.478 - - 0.858 - - 0.796 0.824 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
6. dpp3 ENSDARG00000020676 2393 2.375 - - 0.747 - - 0.820 - - 0.808 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
7. ppl ENSDARG00000101043 9196 2.366 - 0.803 - - - 0.821 0.742 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
8. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 2.322 - - - - - 0.809 0.786 - 0.727 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
9. C3H16orf58 C3H16orf58 487 2.3 - - 0.853 - - 0.734 0.713 - -
10. yif1a ENSDARG00000019636 2215 1.897 - 0.983 - - - 0.914 - - - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
11. ENSDARG00000087348 ENSDARG00000087348 2870 1.873 - 0.997 - - - 0.876 - - -
12. wnt5b ENSDARG00000102464 1662 1.872 - 0.993 0.879 - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
13. GCA GCA 5211 1.819 - 0.991 - - - - 0.828 - -
14. cyt1 ENSDARG00000092947 1717 1.804 - 0.995 - - - - - - 0.809 type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
15. IL17RD ENSDARG00000098359 2309 1.789 - 0.996 - - - 0.793 - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
16. si:ch211-286b5.5 ENSDARG00000096661 3136 1.785 - 0.997 - - - - 0.788 - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
17. perp ENSDARG00000063572 6423 1.777 - 0.993 - - - - 0.784 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
18. si:dkey-153m14.1 si:dkey-153m14.1 4591 1.766 - 0.995 - - - - 0.771 - -
19. TEAD3 TEAD3 8614 1.761 - 0.984 - - - 0.777 - - -
20. cpsf3 ENSDARG00000027649 6897 1.76 - 0.969 - - - - - - 0.791 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
21. KANSL1_1 KANSL1_1 1809 1.744 - 0.939 - - - - - - 0.805
22. ef1 1343 1.739 - - - - - 0.916 - - 0.823 E74-like factor 1 (ets domain transcription factor), transcript variant X4
23. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.736 - 0.992 - - - 0.744 - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
24. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 1.735 - 0.995 - - - - 0.740 - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
25. hmcn1 ENSDARG00000016936 1706 1.734 - 0.994 - - - 0.740 - - - hemicentin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-322]
26. calm1a ENSDARG00000021811 4791 1.729 - 0.998 0.731 - - - - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
27. cnppd1 ENSDARG00000027078 3778 1.727 - 0.995 - - - - 0.732 - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
28. sec61b ENSDARG00000076568 11859 1.726 - 0.954 - - - - 0.772 - - Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
29. ywhabl ENSDARG00000040287 39045 1.713 - - - - - 0.881 0.832 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
30. wdr66 ENSDARG00000059855 276 1.707 - - 0.883 - - - - - 0.824 WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
31. spcs1 ENSDARG00000059298 5327 1.704 - - - - - 0.865 0.839 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
32. wasla ENSDARG00000014113, ENSDARG00000113629, ENSDARG00000115471 1529 1.7 - 0.967 - - - - 0.733 - - Wiskott-Aldrich syndrome-like a [Source:ZFIN;Acc:ZDB-GENE-070209-220]
33. slc25a42 ENSDARG00000099368 2420 1.696 - - 0.862 - - 0.834 - - - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
34. adam10a ENSDARG00000053468 9308 1.695 - - - - - 0.814 0.881 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
35. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.692 - 0.982 - - - 0.710 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
36. ACTR3 ENSDARG00000091138 1739 1.673 - - 0.809 - - - 0.864 - - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
37. zgc:109868 zgc:109868 7474 1.664 - 0.931 - - - - 0.733 - -
38. cnn3a ENSDARG00000099510 6063 1.663 - - - - - - 0.764 - 0.899 calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
39. zgc:56493 ENSDARG00000031435 33407 1.655 - - - - - 0.876 0.779 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
40. arhgap29b ENSDARG00000017748 812 1.649 - - 0.873 - - 0.776 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
41. si:ch73-308b14.1 si:ch73-308b14.1 1106 1.649 - - 0.879 - - - 0.770 - -
42. zgc:194839 ENSDARG00000078550 4003 1.643 - - 0.813 - - 0.830 - - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
43. zgc:56530 zgc:56530 6300 1.642 - - - - - 0.843 0.799 - -
44. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.64 - - - - - 0.908 0.732 - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
45. PHTF1 PHTF1 1029 1.636 - - - - - 0.840 0.796 - -
46. si:dkey-199f5.8 ENSDARG00000018853 3249 1.634 - - - - - 0.788 0.846 - - si:dkey-199f5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-4733]
47. CU633910.1 CU633910.1 828 1.633 - - - - - 0.830 0.803 - -
48. pak2a ENSDARG00000068177 8931 1.632 - - 0.855 - - 0.777 - - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
49. arpc1a ENSDARG00000008383 7353 1.632 - - - - - 0.822 0.810 - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
50. rnf183 ENSDARG00000068851 2427 1.627 - - - - - - 0.708 - 0.919 ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
51. elovl6l ENSDARG00000038639 1184 1.627 - - - - - 0.893 0.734 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
52. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.626 - - 0.821 - - 0.805 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
53. necap2 ENSDARG00000046002 4372 1.623 - - - - - 0.849 - - 0.774 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
54. sp3a ENSDARG00000001549 1994 1.619 - - 0.816 - - - 0.803 - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
55. lama5 ENSDARG00000058543 2782 1.619 - - 0.858 - - 0.761 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
56. vimp 4034 1.615 - - - - - 0.763 0.852 - - VCP-interacting membrane selenoprotein
57. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.614 - - - - - 0.759 0.855 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
58. zgc:91909 ENSDARG00000021287 1488 1.611 - - - - - 0.822 0.789 - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
59. shc1 ENSDARG00000075437 3278 1.611 - - - - - 0.875 0.736 - - SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
60. SH3D21 ENSDARG00000099448 1726 1.611 - - - - - 0.830 0.781 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
61. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.609 - - - - - 0.813 - - 0.796 ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
62. nccrp1 ENSDARG00000035326, ENSDARG00000113175 11385 1.606 - 0.838 - - - - 0.768 - - non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
63. trpm7 ENSDARG00000036232 925 1.603 - - 0.888 - - 0.715 - - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
64. SYDE2 ENSDARG00000099479 1891 1.597 - - 0.867 - - - 0.730 - - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
65. nt5c1bb ENSDARG00000033742 1248 1.595 - - - - - - 0.776 - 0.819 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
66. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.59 - - 0.842 - - 0.748 - - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
67. si:ch73-173m3.3 si:ch73-173m3.3 425 1.59 - - 0.868 - - 0.722 - - -
68. sdf4 ENSDARG00000070682, ENSDARG00000109313 1623 1.59 - - - - - 0.817 0.773 - - stromal cell derived factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2061]
69. b3gnt2b ENSDARG00000091902 4125 1.589 - - 0.885 - - - 0.704 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
70. src ENSDARG00000008107 3643 1.583 - - 0.786 - - 0.797 - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
71. adam17a ENSDARG00000043213 1305 1.583 - - - - - 0.837 0.746 - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
72. dbnla ENSDARG00000008170 2129 1.58 0.768 - - - - 0.812 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
73. chmp5b ENSDARG00000103718 1608 1.58 - - - - - 0.823 0.757 - - charged multivesicular body protein 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1374]
74. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.578 - - 0.871 - - 0.707 - - -
75. myl12.2 ENSDARG00000025326 1887 1.577 - - - 0.771 - - - - 0.806 myosin, light chain 12, genome duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9028]
76. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.574 - - - - - 0.800 0.774 - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
77. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.573 - - - - - 0.753 - - 0.820 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
78. uhmk1 ENSDARG00000059575 1486 1.573 - - - - - - 0.760 - 0.813 U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
79. lman2 ENSDARG00000061854 6251 1.573 - - - - - - 0.792 - 0.781 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
80. grina grina 4656 1.572 - - - - - 0.734 0.838 - -
81. hexb ENSDARG00000034368 3505 1.569 - 0.844 - - - - 0.725 - - hexosaminidase B (beta polypeptide) [Source:ZFIN;Acc:ZDB-GENE-030131-2333]
82. CU862021.1 CU862021.1 5925 1.569 - - - - - 0.830 0.739 - -
83. vmp1 ENSDARG00000012450 2891 1.569 - - 0.810 - - - 0.759 - - vacuole membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8733]
84. calrl calrl 16799 1.567 - 0.826 0.741 - - - - - -
85. klf15 ENSDARG00000091127 1037 1.567 - - 0.867 - - 0.700 - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
86. mdm4 ENSDARG00000057513 1954 1.564 - - 0.795 - - 0.769 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
87. cldnb ENSDARG00000009544 6036 1.564 - - - - - 0.793 0.771 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
88. cyfip1 ENSDARG00000044345 5483 1.563 - - - - - - 0.836 - 0.727 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
89. pef1 ENSDARG00000023989 3013 1.562 - - - - - 0.781 0.781 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
90. txnrd1 11401 1.561 - - - - - 0.788 0.773 - - thioredoxin reductase 1
91. IWS1 2428 1.561 - - 0.814 - - - 0.747 - - IWS1, SUPT6H interacting protein, transcript variant X2
92. b4galt4 ENSDARG00000104042 1479 1.56 - - 0.818 - - - 0.742 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 [Source:ZFIN;Acc:ZDB-GENE-041114-103]
93. p4ha2 ENSDARG00000010085 2008 1.559 - - 0.806 - - - - - 0.753 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030827-1]
94. col16a1 ENSDARG00000009194 5600 1.558 - - - - - 0.773 - - 0.785 collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
95. sptssa ENSDARG00000071203 2306 1.556 - - - - - 0.845 0.711 - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
96. bcar1 ENSDARG00000056525 6563 1.555 - - - - - 0.758 0.797 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
97. TRIP10 TRIP10 1079 1.554 - - 0.849 - - 0.705 - - -
98. rnf128a ENSDARG00000016867 3146 1.552 - - - - - 0.842 0.710 - - ring finger protein 128a [Source:ZFIN;Acc:ZDB-GENE-030131-1044]
99. exosc1 ENSDARG00000059841 6895 1.55 - - - - - - 0.785 - 0.765 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
100. FP236813.1 FP236813.1 1842 1.55 - - 0.766 - - - 0.784 - -

There are 1578 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA