Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nudcd3

Gene Name Gene ID Reads Annotation
nudcd3 ENSDARG00000098361 538 NudC domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2255]










Genes with expression patterns similar to nudcd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nudcd3 ENSDARG00000098361 538 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NudC domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2255]
2. rc3h1 rc3h1 1087 1.658 - 0.798 - 0.860 - - - - -
3. ftr14 ENSDARG00000053293 77 1.626 - 0.855 - - - - 0.771 - - finTRIM family, member 14 [Source:ZFIN;Acc:ZDB-GENE-060512-201]
4. st14b ENSDARG00000044655 415 1.616 0.742 0.874 - - - - - - - suppression of tumorigenicity 14 (colon carcinoma) b [Source:ZFIN;Acc:ZDB-GENE-061103-613]
5. spry2 ENSDARG00000078308 1200 1.59 0.752 - - 0.838 - - - - - sprouty RTK signaling antagonist 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7038]
6. kcnj1b ENSDARG00000002666 87 1.588 - 0.866 - - - - 0.722 - - potassium inwardly-rectifying channel, subfamily J, member 1b [Source:ZFIN;Acc:ZDB-GENE-070620-9]
7. setd8a 2549 1.565 - 0.792 - 0.773 - - - - - SET domain containing (lysine methyltransferase) 8a
8. C3H16orf72 C3H16orf72 2059 1.535 - 0.707 - 0.828 - - - - -
9. pof1b ENSDARG00000054060 2355 1.531 - 0.748 - 0.783 - - - - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
10. arhgap19 ENSDARG00000083189 210 1.481 - - - - 0.710 - 0.771 - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
11. UBL7 UBL7 197 1.44 0.704 - - - - - 0.736 - -
12. fam60al_1 949 0.96 - 0.960 - - - - - - - family with sequence similarity 60, member A, like
13. tmem154 ENSDARG00000074776 454 0.941 - 0.941 - - - - - - - transmembrane protein 154 [Source:ZFIN;Acc:ZDB-GENE-030131-2401]
14. rabl3 ENSDARG00000040959 271 0.93 - 0.930 - - - - - - - RAB, member of RAS oncogene family-like 3 [Source:ZFIN;Acc:ZDB-GENE-040808-11]
15. dnmt3 dnmt3 1912 0.929 - 0.929 - - - - - - -
16. rabl6 rabl6 489 0.926 - 0.926 - - - - - - -
17. eif4ebp3 ENSDARG00000054916 583 0.925 - 0.925 - - - - - - - eukaryotic translation initiation factor 4E binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-44]
18. DBF4B ENSDARG00000086550 374 0.917 - 0.917 - - - - - - - DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
19. nudcd1 ENSDARG00000036158 608 0.915 - 0.915 - - - - - - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
20. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.913 - 0.913 - - - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
21. ZFHX3 ENSDARG00000103057 7759 0.907 - 0.907 - - - - - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
22. SCYL2 ENSDARG00000032627 683 0.907 - 0.907 - - - - - - - SCY1 like pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:19286]
23. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 0.905 - - - 0.905 - - - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
24. myrf ENSDARG00000078676 614 0.903 - 0.903 - - - - - - - myelin regulatory factor [Source:ZFIN;Acc:ZDB-GENE-080204-57]
25. 5S_rRNA 5S_rRNA 239 0.902 - 0.902 - - - - - - -
26. plcd1b ENSDARG00000034080 4074 0.901 - 0.901 - - - - - - - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
27. amfr 774 0.901 - 0.901 - - - - - - - autocrine motility factor receptor, E3 ubiquitin protein ligase a, transcript variant X1
28. crfb16 ENSDARG00000075181 40 0.9 - 0.900 - - - - - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
29. IGLON5 ENSDARG00000022176 1353 0.899 - 0.899 - - - - - - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
30. CABIN1 ENSDARG00000079326 905 0.899 - 0.899 - - - - - - - calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
31. frmd8 ENSDARG00000073696 2661 0.899 - 0.899 - - - - - - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
32. chd1l ENSDARG00000015471 1142 0.899 - 0.899 - - - - - - - chromodomain helicase DNA binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-892]
33. gstal gstal 1865 0.898 - 0.898 - - - - - - -
34. kmt2ba ENSDARG00000062962 1572 0.896 - 0.896 - - - - - - - lysine (K)-specific methyltransferase 2Ba [Source:ZFIN;Acc:ZDB-GENE-060503-376]
35. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 0.893 - 0.893 - - - - - - - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
36. PPP1R3E PPP1R3E 340 0.892 - 0.892 - - - - - - -
37. MEGF9 MEGF9 482 0.891 - 0.891 - - - - - - -
38. SPG21 ENSDARG00000007760 645 0.891 - 0.891 - - - - - - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
39. LRRC8E LRRC8E 495 0.89 - 0.890 - - - - - - -
40. hgfb ENSDARG00000079076 168 0.89 - 0.890 - - - - - - - hepatocyte growth factor b [Source:ZFIN;Acc:ZDB-GENE-041014-3]
41. gxylt1b ENSDARG00000022550 160 0.889 - - - - - - 0.889 - - glucoside xylosyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041210-116]
42. layna ENSDARG00000035169 515 0.889 - 0.889 - - - - - - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
43. aldh2.2_1 ENSDARG00000028087 279 0.887 - 0.887 - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
44. atp2a3 ENSDARG00000060978 1408 0.887 - 0.887 - - - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
45. ankrd22 ENSDARG00000002298 261 0.886 - 0.886 - - - - - - - ankyrin repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-040426-1120]
46. fam69b ENSDARG00000117093 244 0.886 - 0.886 - - - - - - - family with sequence similarity 69, member B [Source:ZFIN;Acc:ZDB-GENE-080721-1]
47. triobp triobp 455 0.884 - 0.884 - - - - - - -
48. ca8 ENSDARG00000039098 401 0.884 - 0.884 - - - - - - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
49. txnl1 ENSDARG00000011921 692 0.884 - 0.884 - - - - - - - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
50. RHBDF1 RHBDF1 131 0.884 - 0.884 - - - - - - -
51. zbtb8b ENSDARG00000035889 680 0.883 - 0.883 - - - - - - - zinc finger and BTB domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-050417-42]
52. asb13b ENSDARG00000089833 251 0.883 - 0.883 - - - - - - - ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
53. chst10 ENSDARG00000031632 461 0.882 - - - 0.882 - - - - - carbohydrate sulfotransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040808-40]
54. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 0.881 - - - - - - 0.881 - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
55. igfbp2a ENSDARG00000052470, ENSDARG00000111105 1939 0.881 - 0.881 - - - - - - - insulin-like growth factor binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-000125-12]
56. MPV17L MPV17L 39 0.881 - 0.881 - - - - - - -
57. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.88 - 0.880 - - - - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
58. csnk1g2a ENSDARG00000005458 2917 0.88 - 0.880 - - - - - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
59. si:dkey-247i3.4 si:dkey-247i3.4 89 0.88 - 0.880 - - - - - - -
60. atad1a ENSDARG00000023267 155 0.879 - 0.879 - - - - - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
61. dnajc10 ENSDARG00000074727 1523 0.879 - 0.879 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
62. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 0.879 - 0.879 - - - - - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
63. zgc:77056 ENSDARG00000029615 297 0.879 - 0.879 - - - - - - - zgc:77056 [Source:ZFIN;Acc:ZDB-GENE-030131-5248]
64. gnl1 ENSDARG00000061789, ENSDARG00000114276 78 0.879 - 0.879 - - - - - - - guanine nucleotide binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-060323-1]
65. pik3r3a ENSDARG00000103038 1132 0.878 - 0.878 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
66. slc44a1b ENSDARG00000090982 240 0.878 - 0.878 - - - - - - - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
67. DMXL1 DMXL1 798 0.878 - - - 0.878 - - - - -
68. samm50l ENSDARG00000039681 2465 0.877 0.877 - - - - - - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
69. SYT7 SYT7 45 0.877 - 0.877 - - - - - - -
70. si:ch211-113a14.28 56 0.876 - 0.876 - - - - - - - si:ch211-113a14.28
71. tmed1b ENSDARG00000017255 2238 0.876 - 0.876 - - - - - - - transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]
72. slc35e4 ENSDARG00000009459, ENSDARG00000109666 114 0.876 - 0.876 - - - - - - - solute carrier family 35, member E4 [Source:ZFIN;Acc:ZDB-GENE-050417-407]
73. si:dkey-191j3.3 si:dkey-191j3.3 1987 0.876 - 0.876 - - - - - - -
74. agtrap ENSDARG00000077082, ENSDARG00000114680 329 0.876 - 0.876 - - - - - - - angiotensin II receptor-associated protein [Source:ZFIN;Acc:ZDB-GENE-050309-11]
75. BX284638.2 BX284638.2 265 0.875 - 0.875 - - - - - - -
76. hdac10 ENSDARG00000086458 676 0.875 - 0.875 - - - - - - - histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
77. nsrp1 ENSDARG00000015221 1598 0.875 - 0.875 - - - - - - - nuclear speckle splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2646]
78. anapc1 ENSDARG00000075687 488 0.875 - 0.875 - - - - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
79. glt8d1 ENSDARG00000040157 120 0.875 - 0.875 - - - - - - - glycosyltransferase 8 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-23]
80. si:ch73-367f21.6 ENSDARG00000089953 46 0.875 - 0.875 - - - - - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
81. usp6nl ENSDARG00000022187, ENSDARG00000109772 432 0.875 - 0.875 - - - - - - - USP6 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041210-192]
82. CINP ENSDARG00000073910, ENSDARG00000111466 452 0.874 - 0.874 - - - - - - - cyclin-dependent kinase 2 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050506-72]
83. crebrf ENSDARG00000105114 21 0.874 - 0.874 - - - - - - - creb3 regulatory factor [Source:ZFIN;Acc:ZDB-GENE-120203-3]
84. zp2.1 ENSDARG00000086352 41 0.873 - 0.873 - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-991129-5]
85. ppp2r2c ppp2r2c 441 0.873 - 0.873 - - - - - - -
86. bud31 ENSDARG00000017084 3892 0.873 - 0.873 - - - - - - - BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
87. TUBB8P7_2 TUBB8P7_2 565 0.872 - 0.872 - - - - - - -
88. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 0.872 - 0.872 - - - - - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
89. HNRNPUL2 HNRNPUL2 110 0.872 - 0.872 - - - - - - -
90. SLC16A3 ENSDARG00000045051 83 0.872 - 0.872 - - - - - - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
91. pigt ENSDARG00000075842 210 0.871 - 0.871 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
92. panx1a ENSDARG00000025285 352 0.871 - 0.871 - - - - - - - pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
93. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 0.871 - 0.871 - - - - - - - cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
94. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 0.87 - 0.870 - - - - - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
95. atpv0e2 ENSDARG00000059057 585 0.87 - - - 0.870 - - - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
96. crym ENSDARG00000062817 171 0.87 - 0.870 - - - - - - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
97. ACTN2 ACTN2 343 0.869 - 0.869 - - - - - - -
98. CU638695.1 CU638695.1 90 0.869 - 0.869 - - - - - - -
99. ATP10B ENSDARG00000076230 989 0.868 - 0.868 - - - - - - - ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
100. rnf123 ENSDARG00000031269 519 0.868 - 0.868 - - - - - - - ring finger protein 123 [Source:ZFIN;Acc:ZDB-GENE-050208-529]

There are 631 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA