Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nubp2

Gene Name Gene ID Reads Annotation
nubp2 ENSDARG00000055653 803 nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]










Genes with expression patterns similar to nubp2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nubp2 ENSDARG00000055653 803 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
2. CU928070.1 CU928070.1 1152 2.257 0.702 - - - - 0.756 - 0.799 -
3. hsd11b3a hsd11b3a 1388 1.799 0.898 0.901 - - - - - - -
4. pddc1 pddc1 257 1.79 0.925 0.865 - - - - - - -
5. exoc3l4 ENSDARG00000058180 923 1.761 - 0.941 - 0.820 - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
6. fam105bb fam105bb 1253 1.76 0.863 0.897 - - - - - - -
7. cyp2aa1 ENSDARG00000099003 297 1.751 0.840 0.911 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
8. PLEKHG3 72 1.747 0.949 - - 0.798 - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
9. ormdl2 ENSDARG00000058022 1146 1.741 - 0.891 - - - - - 0.850 - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
10. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 1.733 - 0.922 - - - 0.811 - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
11. adamts6 ENSDARG00000041982 320 1.731 0.914 - - - - - - 0.817 - ADAM metallopeptidase with thrombospondin type 1 motif, 6 [Source:ZFIN;Acc:ZDB-GENE-091113-9]
12. si:dkey-154p10.3 ENSDARG00000068366 153 1.696 - 0.907 - 0.789 - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
13. EDEM3 ENSDARG00000074129 805 1.696 0.780 0.916 - - - - - - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
14. RBMS1 RBMS1 258 1.696 - 0.882 - - - - - 0.814 -
15. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 1.685 - 0.895 - - - - - 0.790 - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
16. cpsf2 ENSDARG00000028971 841 1.667 0.846 - - - - - - 0.821 - cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]
17. rab35 rab35 1287 1.666 0.839 0.827 - - - - - - -
18. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 1.663 0.830 - - 0.833 - - - - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
19. sepn1 801 1.655 0.845 - - - - - - 0.810 - selenoprotein N, 1
20. foxn4 ENSDARG00000010591 2332 1.633 0.723 0.910 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
21. c8a ENSDARG00000039516 495 1.62 - 0.852 - - - 0.768 - - - complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
22. gadd45bb ENSDARG00000013576 331 1.614 0.831 - - - - - - 0.783 - growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
23. amdhd2 ENSDARG00000100376 656 1.61 - 0.894 - - - 0.716 - - - amidohydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1871]
24. sptssa ENSDARG00000071203 2306 1.604 - 0.822 - - - - - 0.782 - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
25. ncaph2 ENSDARG00000033757 1042 1.601 0.879 0.722 - - - - - - - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
26. KCNU1 KCNU1 246 1.595 - 0.877 - 0.718 - - - - -
27. spsb4b ENSDARG00000040538 372 1.594 0.851 0.743 - - - - - - - splA/ryanodine receptor domain and SOCS box containing 4b [Source:ZFIN;Acc:ZDB-GENE-040801-213]
28. EIF1B ENSDARG00000029445 5034 1.592 - - - - - - 0.737 0.855 - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
29. ZFYVE1 ENSDARG00000078652 631 1.584 - 0.844 - - - - - 0.740 - zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]
30. zfr2 ENSDARG00000071683 780 1.584 - 0.800 - 0.784 - - - - - zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
31. dhrs11a ENSDARG00000046090, ENSDARG00000112531 411 1.584 - - - 0.771 - - - 0.813 - dehydrogenase/reductase (SDR family) member 11a [Source:ZFIN;Acc:ZDB-GENE-060929-324]
32. mov10a ENSDARG00000015829 566 1.583 0.819 0.764 - - - - - - - Mov10 RISC complex RNA helicase a [Source:ZFIN;Acc:ZDB-GENE-091230-8]
33. grk5 ENSDARG00000032801 490 1.579 0.724 0.855 - - - - - - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
34. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 1.573 - 0.859 - - 0.714 - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
35. zgc:56064 1275 1.565 - 0.737 - - - - - 0.828 - zgc:56064, transcript variant X1
36. plch2a ENSDARG00000059960 222 1.564 0.808 - - 0.756 - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
37. USO1 ENSDARG00000019581 1617 1.563 - - - - - - - 0.823 0.740 USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
38. tmem165 ENSDARG00000034600 1174 1.559 - 0.848 - 0.711 - - - - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
39. eml2 ENSDARG00000008808 706 1.551 - 0.828 - - - - 0.723 - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
40. dram2b ENSDARG00000044241 503 1.538 - 0.719 - - - - - 0.819 - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
41. cmc1 ENSDARG00000103670 1197 1.536 - 0.786 - - - 0.750 - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
42. zcchc17 ENSDARG00000018936 1577 1.536 - 0.768 - - - - 0.768 - - zinc finger, CCHC domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040325-2]
43. nkiras1 ENSDARG00000099527 277 1.531 0.827 - - - - - - - 0.704 NFKB inhibitor interacting Ras-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-215]
44. MAST2 ENSDARG00000074311, ENSDARG00000109372 1527 1.53 - - - - - - 0.713 0.817 - microtubule associated serine/threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050309-150]
45. hoxa13a ENSDARG00000100312 543 1.52 - - - - - - - 0.754 0.766 homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
46. prelid1a ENSDARG00000098671 4745 1.502 - 0.784 - - - 0.718 - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
47. tead3a ENSDARG00000074321 2240 1.499 - 0.770 - - - - - 0.729 - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
48. serpinb1 ENSDARG00000055416 1320 1.494 0.713 0.781 - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
49. tatdn3 ENSDARG00000054076 130 1.492 0.708 - - 0.784 - - - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
50. cyp2v1 ENSDARG00000018485 694 1.48 - 0.737 - - - 0.743 - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
51. psmd11b ENSDARG00000005134 4242 1.473 - 0.759 - - - - 0.714 - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
52. aim1a 2981 1.465 - 0.737 - - - 0.728 - - - crystallin beta-gamma domain containing 1a, transcript variant X1
53. ANXA1 ANXA1 1103 1.454 0.739 - - - - - 0.715 - -
54. cpm ENSDARG00000011769, ENSDARG00000113736 1113 1.446 0.731 - - - - 0.715 - - - carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
55. otub1b ENSDARG00000011462 4329 1.44 0.702 - - - - 0.738 - - - OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
56. AIFM2 ENSDARG00000077549 1419 1.428 - 0.721 - 0.707 - - - - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
57. si:dkey-12j5.1 ENSDARG00000089480 3198 1.426 - - - - - 0.702 0.724 - - si:dkey-12j5.1 [Source:ZFIN;Acc:ZDB-GENE-100922-71]
58. parp12b ENSDARG00000057974, ENSDARG00000115844 1435 1.422 - - - 0.714 - 0.708 - - - poly (ADP-ribose) polymerase family, member 12b [Source:ZFIN;Acc:ZDB-GENE-030131-2617]
59. fbxo42 ENSDARG00000087545 262 0.968 - 0.968 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
60. grip1 ENSDARG00000015053 1275 0.964 0.964 - - - - - - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
61. PRIM2 ENSDARG00000052721 825 0.961 - 0.961 - - - - - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
62. zgc:172120 ENSDARG00000069199 278 0.955 0.955 - - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
63. RELL1 ENSDARG00000018312 579 0.952 - 0.952 - - - - - - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
64. APLF APLF 691 0.946 0.946 - - - - - - - -
65. slc17a9a ENSDARG00000042954 36 0.945 0.945 - - - - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
66. TTBK2_1 TTBK2_1 649 0.944 0.944 - - - - - - - -
67. nkx1.2la ENSDARG00000006350 76 0.944 0.944 - - - - - - - - NK1 transcription factor related 2-like,a [Source:ZFIN;Acc:ZDB-GENE-040615-1]
68. BX005085.1 ENSDARG00000089947 230 0.944 - 0.944 - - - - - - -
69. SLC5A6 SLC5A6 179 0.944 0.944 - - - - - - - -
70. ftr56 ENSDARG00000030954 23 0.942 0.942 - - - - - - - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
71. BX000442.2 BX000442.2 8 0.942 0.942 - - - - - - - -
72. cart4 ENSDARG00000070142 55 0.942 0.942 - - - - - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
73. fut9d ENSDARG00000028098 427 0.942 0.942 - - - - - - - - fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
74. THBS1_1 THBS1_1 6 0.942 0.942 - - - - - - - -
75. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 0.942 0.942 - - - - - - - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
76. si:ch73-289h5.3 si:ch73-289h5.3 9 0.942 0.942 - - - - - - - -
77. si:dkey-78a14.4 ENSDARG00000036066 17 0.942 0.942 - - - - - - - - si:dkey-78a14.4 [Source:ZFIN;Acc:ZDB-GENE-110408-8]
78. crfb12 ENSDARG00000052413 47 0.942 0.942 - - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
79. tbxas1 ENSDARG00000002249 55 0.942 0.942 - - - - - - - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
80. acta2 ENSDARG00000045180 96 0.942 0.942 - - - - - - - - actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
81. mir184 48 0.942 0.942 - - - - - - - - microRNA 184
82. esr2a ENSDARG00000016454 23 0.942 0.942 - - - - - - - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
83. grin2da ENSDARG00000086207 28 0.942 0.942 - - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
84. btd ENSDARG00000099596 88 0.942 0.942 - - - - - - - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
85. CABZ01113374.2 CABZ01113374.2 27 0.942 0.942 - - - - - - - -
86. CU464087.2 CU464087.2 15 0.942 0.942 - - - - - - - -
87. CR376723.1 CR376723.1 8 0.942 0.942 - - - - - - - -
88. serpinb1l1 ENSDARG00000095830 14 0.942 0.942 - - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040715-5]
89. CABZ01012857.1 CABZ01012857.1 78 0.942 0.942 - - - - - - - -
90. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 0.941 0.941 - - - - - - - - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
91. afap1 ENSDARG00000055284 730 0.941 - 0.941 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
92. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 0.94 0.940 - - - - - - - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
93. zgc:163121 ENSDARG00000055370 110 0.94 0.940 - - - - - - - - zgc:163121 [Source:ZFIN;Acc:ZDB-GENE-070424-80]
94. CABZ01100187.1 CABZ01100187.1 191 0.939 0.939 - - - - - - - -
95. slc9a5 ENSDARG00000078560 76 0.939 0.939 - - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
96. RNF130 ENSDARG00000089767 559 0.937 - 0.937 - - - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
97. acd ENSDARG00000078055 98 0.937 0.937 - - - - - - - - ACD, shelterin complex subunit and telomerase recruitment factor [Source:ZFIN;Acc:ZDB-GENE-081022-45]
98. trmt44 ENSDARG00000033957 133 0.935 0.935 - - - - - - - - tRNA methyltransferase 44 homolog [Source:ZFIN;Acc:ZDB-GENE-041010-189]
99. FAM135B ENSDARG00000105121 207 0.935 0.935 - - - - - - - - family with sequence similarity 135 member B [Source:HGNC Symbol;Acc:HGNC:28029]
100. CABZ01085888.1 CABZ01085888.1 868 0.933 - 0.933 - - - - - - -

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA