Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nub1

Gene Name Gene ID Reads Annotation
nub1 ENSDARG00000061417 33 negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]










Genes with expression patterns similar to nub1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nub1 ENSDARG00000061417 33 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
2. slc7a10b ENSDARG00000051730 44 2.557 - - - - 0.882 0.954 - 0.721 - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
3. top3b ENSDARG00000027586 8 1.858 - - - - - 0.954 0.904 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
4. PGBD4_4 PGBD4_4 15 1.858 - - - - - 0.954 0.904 - -
5. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1.858 - - - - - 0.954 0.904 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
6. si:dkeyp-3f10.17 ENSDARG00000087254 1 1.858 - - - - - 0.954 0.904 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
7. si:dkey-86e18.1 ENSDARG00000043536 75 1.818 - - - - - 0.818 1.000 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
8. ABHD12B_1 ABHD12B_1 57 1.813 - - - - 0.933 - 0.880 - -
9. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1.809 - 0.905 - - - - 0.904 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
10. ppm1na ENSDARG00000010231 3 1.795 0.841 - - - - 0.954 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
11. si:ch211-237l4.6 ENSDARG00000056915 49 1.794 - - - - - 0.880 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
12. si:ch211-42i9.5 si:ch211-42i9.5 21 1.789 0.841 - - - - - 0.948 - -
13. g6pcb ENSDARG00000014967 8 1.745 0.841 - - - - - 0.904 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
14. CABZ01062083.1 CABZ01062083.1 40 1.708 0.841 0.867 - - - - - - -
15. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1.708 0.841 0.867 - - - - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
16. si:dkey-225f23.4 ENSDARG00000102520 86 1.69 0.842 - - - 0.848 - - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
17. SLC16A1 SLC16A1 37 1.675 - 0.721 - - - 0.954 - - -
18. si:ch211-131e11.14 si:ch211-131e11.14 7 1.67 - - - - - 0.954 - - 0.716
19. cga ENSDARG00000040479 3 1.67 - - - - - 0.954 - - 0.716 glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
20. SEMA6B SEMA6B 35 1.659 - - - - 0.755 - 0.904 - -
21. npffr1l3 ENSDARG00000010712 18 1.625 - 0.721 - - - - 0.904 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
22. grnas ENSDARG00000091885 71 1.621 - 0.721 - - - - 0.900 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
23. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 1.608 - - - 0.704 - - 0.904 - -
24. CLNK 8 1.608 - - - 0.704 - - 0.904 - - cytokine dependent hematopoietic cell linker
25. tmem63a ENSDARG00000031956 112 1.599 - 0.760 - - - - 0.839 - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
26. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1.561 - - - 0.845 - - - - 0.716 guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
27. C6H22orf23 C6H22orf23 15 1.557 0.841 - - - - - - - 0.716
28. ATG7 ENSDARG00000102893 1 1.557 0.841 - - - - - - - 0.716 ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
29. si:ch211-220f16.1 ENSDARG00000093977 4 1.557 0.841 - - - - - - - 0.716 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
30. grk1a ENSDARG00000058803 13 1.555 - - - 0.704 - - 0.851 - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
31. zgc:194314 zgc:194314 982 1.543 - - - - 0.840 - 0.703 - -
32. APEH ENSDARG00000008703 73 1.539 - 0.721 - - - 0.818 - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
33. rab36 ENSDARG00000014058 70 1.502 - - - - 0.790 0.712 - - - RAB36, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040910-5]
34. CSMD1 CSMD1 15 1.488 - 0.721 - - - - 0.767 - -
35. CR942805.1 CR942805.1 94 1.48 - - - - - 0.764 - - 0.716
36. FAM188B FAM188B 145 1.474 - - - - 0.731 0.743 - - -
37. ENSDARG00000092910 ENSDARG00000092910 44 1.474 - - - - - 0.764 0.710 - -
38. slc46a3 ENSDARG00000077313 14 1.461 - - - 0.704 - - 0.757 - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
39. C16H1orf43 C16H1orf43 380 1.452 - 0.724 - - - - 0.728 - -
40. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1.445 - 0.704 - - - - 0.741 - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
41. mettl22 ENSDARG00000077863 81 1 1.000 - - - - - - - - methyltransferase like 22 [Source:ZFIN;Acc:ZDB-GENE-081022-70]
42. cacnb3a ENSDARG00000001881, ENSDARG00000110795, ENSDARG00000113797 27 1 1.000 - - - - - - - - calcium channel, voltage-dependent, beta 3a [Source:ZFIN;Acc:ZDB-GENE-060221-2]
43. ca10b ENSDARG00000009568 8 1 - - - - - - 1.000 - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
44. zgc:122979 ENSDARG00000004187 61 1 - - - - - 1.000 - - - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
45. si:dkeyp-53d3.3 ENSDARG00000098664 65 1 - - - - - - 1.000 - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
46. TGFBR3L TGFBR3L 16 1 - - - - - - - - 1.000
47. HIST1H4L ENSDARG00000101249, ENSDARG00000105318, ENSDARG00000105352, ENSDARG00000105353, ENSDARG00000105376, ENSDARG00000105382, ENSDARG00000105409, ENSDARG00000105482, ENSDARG00000110035, ENSDARG00000110152, ENSDARG00000110812, ENSDARG00000111165, ENSDARG00000111247, ENSDARG00000111494, ENSDARG00000111501, ENSDARG00000111619, ENSDARG00000111753, ENSDARG00000112491, ENSDARG00000112528, ENSDARG00000112954, ENSDARG00000114534, ENSDARG00000115054, ENSDARG00000115281, ENSDARG00000115799, ENSDARG00000116781 3 1 - - - - - - - - 1.000 histone 1, H4, like [Source:ZFIN;Acc:ZDB-GENE-070927-10]
48. ZC2HC1C ENSDARG00000070526 14 1 1.000 - - - - - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
49. zgc:113090 ENSDARG00000053260, ENSDARG00000110502, ENSDARG00000115912 9 1 - - - - - - - - 1.000 zgc:113090 [Source:ZFIN;Acc:ZDB-GENE-050522-532]
50. ppp1r9a ENSDARG00000061304 12 1 - - - - - - - - 1.000 protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
51. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 - - - - - 1.000 - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
52. vipas39 ENSDARG00000103690 280 1 - 1.000 - - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
53. si:dkey-27c15.3 ENSDARG00000056847 37 1 1.000 - - - - - - - - si:dkey-27c15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-728]
54. gdpd3b ENSDARG00000006944 19 1 - - - - - - - - 1.000 glycerophosphodiester phosphodiesterase domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-121210-2]
55. il6st ENSDARG00000104693 55 1 1.000 - - - - - - - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
56. ENSDARG00000086520 ENSDARG00000086520 26 1 1.000 - - - - - - - -
57. lenep ENSDARG00000095553 11 1 - - - - - - - - 1.000 lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
58. si:dkey-46g23.2 ENSDARG00000115817 11 1 - - - - - - 1.000 - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
59. pnp4a ENSDARG00000057575 355 1 - 1.000 - - - - - - - purine nucleoside phosphorylase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-83]
60. FP085392.1 FP085392.1 12 1 - - - - - - - - 1.000
61. ciz1b ENSDARG00000089461 57 0.995 - - - - - 0.995 - - - cdkn1a interacting zinc finger protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2933]
62. f2rl1.1 ENSDARG00000068856 47 0.978 - - - - - - 0.978 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
63. zfpm2b ENSDARG00000100560 125 0.966 - - - - - 0.966 - - - zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
64. BX569789.2 BX569789.2 12 0.966 - - - - 0.966 - - - -
65. si:dkey-26i24.1 ENSDARG00000102673 4 0.966 - - - - - 0.966 - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
66. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 0.966 - - - - - 0.966 - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
67. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 0.966 - - - - - 0.966 - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
68. si:dkey-182g1.5 si:dkey-182g1.5 22 0.966 - - - - - 0.966 - - -
69. ubn1 ENSDARG00000063169, ENSDARG00000115275 32 0.966 - - - - - 0.966 - - - ubinuclein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-28]
70. zgc:173713 17 0.966 - - - - - 0.966 - - - zgc:173713, transcript variant X2
71. C25H15orf27 C25H15orf27 69 0.966 - - - - - 0.966 - - -
72. bcan ENSDARG00000099412 18 0.966 - - - - - 0.966 - - - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
73. ZNF337_21 ZNF337_21 53 0.966 - - - - - 0.966 - - -
74. cdadc1 ENSDARG00000036650 16 0.966 - - - - - 0.966 - - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
75. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.966 - - - - - 0.966 - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
76. LRP3 ENSDARG00000008485 1401 0.966 - - - - - 0.966 - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
77. btr16 ENSDARG00000028850 21 0.965 0.965 - - - - - - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
78. eef1a1b ENSDARG00000069951 35 0.965 - - - - 0.965 - - - - eukaryotic translation elongation factor 1 alpha 1b [Source:ZFIN;Acc:ZDB-GENE-050417-327]
79. got1l1 ENSDARG00000053644 49 0.965 0.965 - - - - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
80. arl11l arl11l 31 0.964 - - - - 0.964 - - - -
81. ARHGEF40 ENSDARG00000078979 25 0.964 - - - - 0.964 - - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
82. grin2cb ENSDARG00000077560 9 0.964 - - - - 0.964 - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
83. si:ch211-198k9.10 si:ch211-198k9.10 47 0.964 - - - - 0.964 - - - -
84. BX572619.1 ENSDARG00000089303 78 0.962 - - - - 0.962 - - - - wu:fa25f02 [Source:NCBI gene;Acc:562425]
85. TRIM14_13 TRIM14_13 18 0.961 - - - - 0.961 - - - -
86. zgc:153911 ENSDARG00000002509 110 0.959 - - - - 0.959 - - - - zgc:153911 [Source:ZFIN;Acc:ZDB-GENE-061013-174]
87. si:dkey-197d18.2 si:dkey-197d18.2 10 0.958 - - - - 0.958 - - - -
88. si:dkey-7e14.3 ENSDARG00000086055 50 0.955 - - - - - - 0.955 - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
89. RBBP6_2 RBBP6_2 23 0.955 - - - - 0.955 - - - -
90. EPHB1 ENSDARG00000076757 20 0.954 - - - - - 0.954 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
91. CCDC88A_1 CCDC88A_1 12 0.954 - - - - - 0.954 - - -
92. hapln4 ENSDARG00000018542 10 0.954 - - - - - 0.954 - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
93. si:ch211-274k16.9 ENSDARG00000095918 1 0.954 - - - - - 0.954 - - - si:ch211-274k16.9 [Source:ZFIN;Acc:ZDB-GENE-110408-30]
94. rnasel2 ENSDARG00000043196 0 0.954 - - - - - 0.954 - - - ribonuclease like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-420]
95. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 0.954 - - - - - 0.954 - - -
96. AL935186.3 ENSDARG00000109223 19 0.954 - - - - - 0.954 - - -
97. si:dkey-94f20.4 ENSDARG00000016923 2 0.954 - - - - - 0.954 - - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
98. slc35f3a ENSDARG00000075909 1 0.954 - - - - - 0.954 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
99. ctdnep1b ENSDARG00000035781 65 0.954 - - - - - 0.954 - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
100. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 0.954 - - - - - 0.954 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]

There are 1215 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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