Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ntrk1

Gene Name Gene ID Reads Annotation
ntrk1 ENSDARG00000004586 19 neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]










Genes with expression patterns similar to ntrk1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ntrk1 ENSDARG00000004586 19 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
2. hs6st3b ENSDARG00000069500 5 2 1.000 1.000 - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
3. si:ch211-225h9.2 si:ch211-225h9.2 16 2 1.000 1.000 - - - - - - -
4. VOPP1_1 VOPP1_1 73 2 1.000 1.000 - - - - - - -
5. lrp2b ENSDARG00000007906 23 2 1.000 1.000 - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
6. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1.892 - 1.000 - 0.892 - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
7. nanog ENSDARG00000075113 10 1.892 - 1.000 - 0.892 - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
8. wu:fb63c12 26 1.892 - 1.000 - 0.892 - - - - - wu:fb63c12
9. BX465848.2 ENSDARG00000116920 6 1.892 - 1.000 - - 0.892 - - - -
10. AL929220.1 ENSDARG00000103323 14 1.892 - 1.000 - 0.892 - - - - -
11. rsph4a ENSDARG00000067606 132 1.889 1.000 0.889 - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
12. si:ch211-218d20.10 si:ch211-218d20.10 4 1.811 1.000 - 0.811 - - - - - -
13. SLCO5A1 SLCO5A1 6 1.809 - 1.000 0.809 - - - - - -
14. AC024175.11 AC024175.11 12 1.803 - 1.000 0.803 - - - - - -
15. itfg2 ENSDARG00000002174 114 1.803 1.000 - 0.803 - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
16. napgl napgl 39 1.781 - 1.000 0.781 - - - - - -
17. lhfpl3 ENSDARG00000021595 107 1.771 0.771 1.000 - - - - - - - LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
18. BX640518.1 BX640518.1 24 1.764 0.764 1.000 - - - - - - -
19. C14H5orf45 C14H5orf45 83 1.764 0.764 1.000 - - - - - - -
20. CT573248.1 ENSDARG00000074029 10 1.748 - 1.000 - - - - - 0.748 -
21. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1.739 1.000 - 0.739 - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
22. si:ch211-42d10.5 si:ch211-42d10.5 17 1.714 - 1.000 0.714 - - - - - -
23. xkr6 xkr6 286 1.714 1.000 0.714 - - - - - - -
24. zgc:172139 ENSDARG00000068830 10 1.705 0.813 - - 0.892 - - - - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
25. nxph1 ENSDARG00000033447 182 1.657 0.711 0.946 - - - - - - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
26. TMEM196 ENSDARG00000114159 80 1.649 0.764 0.885 - - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
27. mgrn1b ENSDARG00000004796 18 1.606 0.764 - - - 0.842 - - - - mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
28. si:dkey-265e15.5 ENSDARG00000103229 6 1.584 0.764 - 0.820 - - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
29. si:dkey-19n13.5 si:dkey-19n13.5 36 1.571 - - 0.777 - 0.794 - - - -
30. CRELD1 794 1 - 1.000 - - - - - - - cysteine rich with EGF like domains 1
31. si:ch211-121a2.4 ENSDARG00000028541 40 1 - 1.000 - - - - - - - si:ch211-121a2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-23]
32. CNTNAP3 ENSDARG00000067824 25 1 - 1.000 - - - - - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
33. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - 1.000 - - - - - - -
34. si:ch211-102g22.3 si:ch211-102g22.3 2 1 - 1.000 - - - - - - -
35. dnah7 ENSDARG00000060165 21 1 1.000 - - - - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
36. CABZ01073380.1 CABZ01073380.1 5 1 - 1.000 - - - - - - -
37. CU457819.2 ENSDARG00000105374 8 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
38. tmem151a ENSDARG00000079908 2 1 1.000 - - - - - - - - transmembrane protein 151A [Source:ZFIN;Acc:ZDB-GENE-091118-118]
39. neurod6a ENSDARG00000040008 17 1 - 1.000 - - - - - - - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
40. atl1 ENSDARG00000060481 251 1 - 1.000 - - - - - - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
41. myrip ENSDARG00000038814 103 1 1.000 - - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
42. CR394546.2 ENSDARG00000090061 3 1 1.000 - - - - - - - -
43. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 - 1.000 - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
44. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
45. PSTPIP2 ENSDARG00000089569 1 1 - 1.000 - - - - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
46. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
47. OTOL1 OTOL1 19 1 - 1.000 - - - - - - -
48. pcsk2 ENSDARG00000019451 442 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
49. CACNA2D1_1 ENSDARG00000073752 2 1 1.000 - - - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
50. IL17RA_1 IL17RA_1 39 1 - 1.000 - - - - - - -
51. TRMT12 ENSDARG00000060338 58 1 - 1.000 - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
52. zgc:173652_1 4 1 - 1.000 - - - - - - - zgc:173652
53. mir15a-1 36 1 1.000 - - - - - - - - microRNA 15a-1
54. pole2 ENSDARG00000100028 42 1 - 1.000 - - - - - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
55. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
56. si:dkey-281i15.9 si:dkey-281i15.9 1 1 - 1.000 - - - - - - -
57. tmprss3a ENSDARG00000053315 5 1 - 1.000 - - - - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
58. si:dkey-163m14.10 si:dkey-163m14.10 33 1 - 1.000 - - - - - - -
59. PLD1 PLD1 158 1 1.000 - - - - - - - -
60. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
61. gpc5 gpc5 184 1 - 1.000 - - - - - - -
62. slc1a1 ENSDARG00000020212 104 1 - 1.000 - - - - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
63. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1 1.000 - - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
64. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 1.000 - - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
65. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1 - 1.000 - - - - - - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
66. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
67. SLX1A SLX1A 15 1 - 1.000 - - - - - - -
68. PLBD1 ENSDARG00000063313 1 1 1.000 - - - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
69. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
70. zgc:174688 zgc:174688 170 1 - 1.000 - - - - - - -
71. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
72. mettl8 ENSDARG00000017359 36 1 - 1.000 - - - - - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
73. CABZ01090951.1 CABZ01090951.1 78 1 1.000 - - - - - - - -
74. irf4a ENSDARG00000006560 4 1 - 1.000 - - - - - - - interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
75. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 1.000 - - - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
76. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
77. lcmt2 ENSDARG00000000747, ENSDARG00000110257 97 1 1.000 - - - - - - - - leucine carboxyl methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-110714-2]
78. CABZ01090303.1 CABZ01090303.1 2 1 - 1.000 - - - - - - -
79. il11a ENSDARG00000037859 5 1 - 1.000 - - - - - - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
80. TFR2 ENSDARG00000103727 1 1 - 1.000 - - - - - - - transferrin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041220-3]
81. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
82. si:ch211-209p16.1 si:ch211-209p16.1 1 1 - 1.000 - - - - - - -
83. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - 1.000 - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
84. CABZ01012080.1 CABZ01012080.1 10 1 - 1.000 - - - - - - -
85. AL935272.2 AL935272.2 37 1 - 1.000 - - - - - - -
86. AL935174.1 ENSDARG00000109674 18 1 - 1.000 - - - - - - -
87. fshb ENSDARG00000010841 0 1 - 1.000 - - - - - - - follicle stimulating hormone subunit beta [Source:ZFIN;Acc:ZDB-GENE-040806-1]
88. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
89. ankrd1b ENSDARG00000076192 204 1 - 1.000 - - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
90. prkar2ab ENSDARG00000009477 2 1 - 1.000 - - - - - - - protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
91. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1 - 1.000 - - - - - - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
92. myh11a ENSDARG00000009782 80 1 - 1.000 - - - - - - - myosin, heavy chain 11a, smooth muscle [Source:ZFIN;Acc:ZDB-GENE-050531-1]
93. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
94. SLC41A2_1 SLC41A2_1 69 1 - 1.000 - - - - - - -
95. MCOLN2 ENSDARG00000098918 12 1 - 1.000 - - - - - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
96. PTCHD2 PTCHD2 2 1 1.000 - - - - - - - -
97. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
98. TRIM35 TRIM35 100 1 - 1.000 - - - - - - -
99. KCNN2 ENSDARG00000014939 25 1 - 1.000 - - - - - - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
100. foxg1b ENSDARG00000032705 354 1 - 1.000 - - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]

There are 770 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA