Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ntrk1

Gene Name Gene ID Reads Annotation
ntrk1 ENSDARG00000004586 19 neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]










Genes with expression patterns similar to ntrk1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ntrk1 ENSDARG00000004586 19 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
2. VOPP1_1 VOPP1_1 73 2 1.000 1.000 - - - - - - -
3. lrp2b ENSDARG00000007906 23 2 1.000 1.000 - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
4. hs6st3b ENSDARG00000069500 5 2 1.000 1.000 - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
5. si:ch211-225h9.2 si:ch211-225h9.2 16 2 1.000 1.000 - - - - - - -
6. nanog ENSDARG00000075113 10 1.892 - 1.000 - 0.892 - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
7. BX465848.2 ENSDARG00000116920 6 1.892 - 1.000 - - 0.892 - - - -
8. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1.892 - 1.000 - 0.892 - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
9. wu:fb63c12 26 1.892 - 1.000 - 0.892 - - - - - wu:fb63c12
10. AL929220.1 ENSDARG00000103323 14 1.892 - 1.000 - 0.892 - - - - -
11. rsph4a ENSDARG00000067606 132 1.889 1.000 0.889 - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
12. si:ch211-218d20.10 si:ch211-218d20.10 4 1.811 1.000 - 0.811 - - - - - -
13. SLCO5A1 SLCO5A1 6 1.809 - 1.000 0.809 - - - - - -
14. AC024175.11 AC024175.11 12 1.803 - 1.000 0.803 - - - - - -
15. itfg2 ENSDARG00000002174 114 1.803 1.000 - 0.803 - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
16. napgl napgl 39 1.781 - 1.000 0.781 - - - - - -
17. lhfpl3 ENSDARG00000021595 107 1.771 0.771 1.000 - - - - - - - LHFPL tetraspan subfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040801-180]
18. BX640518.1 BX640518.1 24 1.764 0.764 1.000 - - - - - - -
19. C14H5orf45 C14H5orf45 83 1.764 0.764 1.000 - - - - - - -
20. CT573248.1 ENSDARG00000074029 10 1.748 - 1.000 - - - - - 0.748 -
21. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1.739 1.000 - 0.739 - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
22. xkr6 xkr6 286 1.714 1.000 0.714 - - - - - - -
23. si:ch211-42d10.5 si:ch211-42d10.5 17 1.714 - 1.000 0.714 - - - - - -
24. zgc:172139 ENSDARG00000068830 10 1.705 0.813 - - 0.892 - - - - - zgc:172139 [Source:ZFIN;Acc:ZDB-GENE-080204-49]
25. nxph1 ENSDARG00000033447 182 1.657 0.711 0.946 - - - - - - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
26. TMEM196 ENSDARG00000114159 80 1.649 0.764 0.885 - - - - - - - transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]
27. mgrn1b ENSDARG00000004796 18 1.606 0.764 - - - 0.842 - - - - mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
28. si:dkey-265e15.5 ENSDARG00000103229 6 1.584 0.764 - 0.820 - - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
29. si:dkey-19n13.5 si:dkey-19n13.5 36 1.571 - - 0.777 - 0.794 - - - -
30. CABZ01118317.1 CABZ01118317.1 0 1 - 1.000 - - - - - - -
31. si:dkey-191g9.5 ENSDARG00000056080 60 1 1.000 - - - - - - - - si:dkey-191g9.5 [Source:ZFIN;Acc:ZDB-GENE-090313-217]
32. XYLT2 ENSDARG00000059557 1 1 - 1.000 - - - - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
33. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
34. MID2 ENSDARG00000034871 0 1 - 1.000 - - - - - - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
35. si:dkey-51d8.6 ENSDARG00000090769 17 1 - 1.000 - - - - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
36. si:dkey-256e21.1 si:dkey-256e21.1 11 1 - 1.000 - - - - - - -
37. ripply2 ENSDARG00000070535 18 1 1.000 - - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
38. si:dkey-34f16.9 si:dkey-34f16.9 1 1 1.000 - - - - - - - -
39. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - 1.000 - - - - - - -
40. RIMS1 RIMS1 9 1 1.000 - - - - - - - -
41. CABZ01085626.1 ENSDARG00000117294 8 1 1.000 - - - - - - - -
42. sept5b ENSDARG00000036031 188 1 - 1.000 - - - - - - - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
43. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
44. wisp1a ENSDARG00000054331 26 1 - 1.000 - - - - - - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
45. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
46. mir219-1 101 1 1.000 - - - - - - - - microRNA 219-1
47. BX255895.1 BX255895.1 29 1 - 1.000 - - - - - - -
48. ENSDARG00000089102 ENSDARG00000089102 1 1 - 1.000 - - - - - - -
49. PDE9A_1 PDE9A_1 1 1 - 1.000 - - - - - - -
50. CABZ01112850.1 CABZ01112850.1 7 1 - 1.000 - - - - - - -
51. PROC PROC 11 1 - 1.000 - - - - - - -
52. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - 1.000 - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
53. CR377211.1 ENSDARG00000079364 24 1 - 1.000 - - - - - - - olfactory receptor 2T2-like [Source:NCBI gene;Acc:103910036]
54. si:dkey-14d8.2 38 1 - 1.000 - - - - - - - si:dkey-14d8.2
55. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - 1.000 - - - - - - -
56. cpa2 ENSDARG00000010146 28 1 1.000 - - - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
57. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
58. ifitm5 ENSDARG00000105153 132 1 - 1.000 - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
59. CR382372.1 ENSDARG00000096684 2 1 1.000 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
60. gabrr2a ENSDARG00000052982 21 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
61. stk32a ENSDARG00000079499 17 1 1.000 - - - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
62. slc12a2_1 ENSDARG00000104573 1 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
63. si:ch211-207c6.7 si:ch211-207c6.7 8 1 - 1.000 - - - - - - -
64. DUSP19 DUSP19 10 1 1.000 - - - - - - - -
65. si:dkey-91i10.7 si:dkey-91i10.7 9 1 - 1.000 - - - - - - -
66. CABZ01072096.1 ENSDARG00000079483 168 1 1.000 - - - - - - - -
67. zgc:92249 14 1 - 1.000 - - - - - - - zgc:92249
68. dvr1 dvr1 24 1 - 1.000 - - - - - - -
69. PEG3_13 PEG3_13 5 1 - 1.000 - - - - - - -
70. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
71. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
72. cd151l ENSDARG00000068629 16 1 - 1.000 - - - - - - - CD151 antigen, like [Source:ZFIN;Acc:ZDB-GENE-040426-1868]
73. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
74. ZC3H12A ENSDARG00000005271 5 1 - 1.000 - - - - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
75. zgc:174688 zgc:174688 170 1 - 1.000 - - - - - - -
76. gramd4 gramd4 4 1 - 1.000 - - - - - - -
77. CABZ01072254.1 ENSDARG00000076111 4 1 1.000 - - - - - - - - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
78. gria2b ENSDARG00000052765 188 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
79. fstl5 ENSDARG00000040198 213 1 1.000 - - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
80. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 - 1.000 - - - - - - -
81. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
82. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
83. CABZ01048021.1 CABZ01048021.1 15 1 - 1.000 - - - - - - -
84. si:dkey-24c2.6 si:dkey-24c2.6 1 1 - 1.000 - - - - - - -
85. CU984579.1 ENSDARG00000116863 15 1 - 1.000 - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
86. adprhl1 ENSDARG00000041589 34 1 1.000 - - - - - - - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
87. CR394546.2 ENSDARG00000090061 3 1 1.000 - - - - - - - -
88. nsdhl ENSDARG00000099315 63 1 - 1.000 - - - - - - - NAD(P) dependent steroid dehydrogenase-like [Source:ZFIN;Acc:ZDB-GENE-050417-163]
89. dhrs13l1 ENSDARG00000098746 102 1 - 1.000 - - - - - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
90. CR352328.3 CR352328.3 9 1 1.000 - - - - - - - -
91. TTF1_3 TTF1_3 215 1 1.000 - - - - - - - -
92. zgc:113343 ENSDARG00000103196 2 1 - 1.000 - - - - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
93. OXLD1 8 1 1.000 - - - - - - - - oxidoreductase-like domain containing 1, transcript variant X1
94. TRIM35 TRIM35 100 1 - 1.000 - - - - - - -
95. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - 1.000 - - - - - - -
96. si:dkey-151m22.9 si:dkey-151m22.9 6 1 1.000 - - - - - - - -
97. CABZ01074946.1 CABZ01074946.1 119 1 1.000 - - - - - - - -
98. ENSDARG00000077328 ENSDARG00000077328 1 1 - 1.000 - - - - - - -
99. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
100. KIF9 ENSDARG00000031693 11 1 - 1.000 - - - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]

There are 770 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA