Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ntn1a

Gene Name Gene ID Reads Annotation
ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]










Genes with expression patterns similar to ntn1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
2. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.048 - - 0.725 - - 0.701 0.889 - 0.733 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
3. prr12a ENSDARG00000074229 1668 2.597 - 0.993 - - - 0.742 - - 0.862 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
4. si:ch73-265d7.2 ENSDARG00000116713 2142 2.551 0.812 - - - - 0.847 0.892 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
5. olig2 ENSDARG00000040946 1405 2.542 - - - - - 0.711 0.899 - 0.932 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
6. nkx6.1 ENSDARG00000022569 3779 2.502 0.793 - - - - 0.796 0.913 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
7. gad1b ENSDARG00000027419 440 2.497 - - - - - 0.701 0.852 - 0.944 glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
8. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 2.482 0.834 - - - - 0.774 0.874 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
9. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 2.474 - - - - - 0.776 0.825 - 0.873 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
10. ank2b ENSDARG00000043313 3065 2.473 - - - - - 0.819 0.827 - 0.827 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
11. kif5c ENSDARG00000076027 424 2.453 - - - - - 0.721 0.798 - 0.934 kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
12. gad2 ENSDARG00000015537 724 2.44 - - - - - 0.716 0.860 - 0.864 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
13. PSIP1 PSIP1 5252 2.434 - 0.976 - - - - 0.756 - 0.702
14. zgc:113531 ENSDARG00000038794 2063 2.429 0.798 - - - - 0.745 0.886 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
15. ADAMTS3 ENSDARG00000060127 2839 2.4 0.787 - - - - 0.726 0.887 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
16. mnx2a ENSDARG00000042106 939 2.399 0.781 - - - - 0.702 0.916 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
17. hectd2 ENSDARG00000061194 559 2.393 0.727 - - - - 0.784 0.882 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
18. PRIMA1 PRIMA1 459 2.386 0.836 - - - - 0.722 0.828 - -
19. ldb2b ENSDARG00000034896, ENSDARG00000113987, ENSDARG00000116485 976 2.324 - - - - - 0.736 0.824 - 0.764 LIM domain binding 2b [Source:ZFIN;Acc:ZDB-GENE-990415-137]
20. cyr61l2 ENSDARG00000099985 725 2.314 0.759 - - - - 0.784 0.771 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
21. neurog1 ENSDARG00000056130 3924 2.306 - - - - - 0.712 0.833 - 0.761 neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
22. nkx2.2a ENSDARG00000053298 747 2.305 0.745 - - - - 0.793 0.767 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
23. irx1b ENSDARG00000056594 2224 2.296 - - - - - 0.701 0.821 - 0.774 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
24. arvcfb ENSDARG00000061688 2388 2.291 0.774 - - - - 0.743 0.774 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
25. im:7162084 im:7162084 665 2.272 0.735 - - - - 0.739 0.798 - -
26. NRAP ENSDARG00000009341 3565 2.268 0.846 - - - - 0.708 0.714 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
27. plxnb1a ENSDARG00000075821 1702 2.257 0.708 - - - - 0.772 0.777 - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
28. chd7 ENSDARG00000075211 12085 2.232 - - - - - 0.766 0.764 0.702 - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
29. ephb3a ENSDARG00000031548 1872 2.211 - - - 0.726 - 0.776 0.709 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
30. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 2.167 0.747 - - - - 0.706 0.714 - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
31. KLF8 ENSDARG00000060661 219 1.94 - 0.992 - - - - - - 0.948 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
32. eya3 ENSDARG00000036100 1965 1.926 - 0.989 - - - - - - 0.937 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
33. cnot3b ENSDARG00000019842 838 1.917 - 0.990 - - - - - - 0.927 CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
34. aqr ENSDARG00000016775 1581 1.915 - 0.982 - - - - - - 0.933 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
35. larp1 ENSDARG00000101722 976 1.905 - 0.991 - - - - - - 0.914 La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
36. tpst1 ENSDARG00000073872 2490 1.887 - 0.982 - - - - - - 0.905 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
37. CHD1 ENSDARG00000103787 1645 1.87 - 0.993 - - - - - - 0.877 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
38. tox4 tox4 1671 1.848 - 0.996 - - - - - - 0.852
39. ankhd1 ENSDARG00000077860 5510 1.837 - 0.940 - - - - - - 0.897 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
40. tsc22d1 ENSDARG00000038306 2413 1.822 - 0.985 - - - - - - 0.837 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
41. SYNPO2L SYNPO2L 6697 1.812 0.832 0.980 - - - - - - -
42. NHS NHS 409 1.788 - - - - - - 0.837 - 0.951
43. nrxn3b ENSDARG00000062693 192 1.775 - - - - - - 0.824 - 0.951 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
44. tomm22 ENSDARG00000045146, ENSDARG00000109761 3545 1.775 - 0.938 - - - - - - 0.837 translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810]
45. st8sia2 ENSDARG00000018788 2183 1.772 - - - - - - 0.842 - 0.930 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
46. fxr1 ENSDARG00000022968 2831 1.77 - 0.964 - - - 0.806 - - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
47. si:ch211-151o1.2 si:ch211-151o1.2 3580 1.762 - 0.993 - - - - 0.769 - -
48. rerea ENSDARG00000077353 4162 1.75 - 0.986 0.764 - - - - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
49. st8sia5 ENSDARG00000036584 529 1.745 - - - - - - 0.786 - 0.959 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
50. ache ENSDARG00000031796 1985 1.744 - - - - - 0.872 0.872 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
51. jph3 ENSDARG00000102204 175 1.74 - - - - - - 0.790 - 0.950 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
52. sema3c ENSDARG00000034300 881 1.735 - - - - - 0.862 0.873 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
53. mnx2b ENSDARG00000030350 484 1.73 - - - - - 0.804 0.926 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
54. rac3a ENSDARG00000090062 394 1.727 - - - - - - 0.775 - 0.952 Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
55. nploc4 ENSDARG00000100487 1262 1.727 - - - - - - 0.841 - 0.886 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
56. CU861453.1 ENSDARG00000097192 271 1.721 - - - - - 0.774 - - 0.947
57. rusc1 ENSDARG00000078125 617 1.718 - - - - - - 0.773 - 0.945 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
58. gpr98 gpr98 717 1.716 - - - - - 0.878 0.838 - -
59. psma6a ENSDARG00000019398 2702 1.715 - 0.985 - - - - 0.730 - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
60. nupl2 ENSDARG00000029043 105 1.714 - - - - - - 0.771 - 0.943 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
61. brms1lb ENSDARG00000018047 453 1.711 - - - - - - 0.761 - 0.950 BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
62. SSX2IP SSX2IP 316 1.71 - - - - - 0.800 0.910 - -
63. ptn ENSDARG00000102340 229 1.708 - - - - - - 0.759 - 0.949 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
64. psma6b ENSDARG00000013966 4410 1.704 - 0.976 - - - 0.728 - - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
65. pkd2l1 ENSDARG00000022503 372 1.703 - - - - - 0.844 0.859 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
66. igsf9a ENSDARG00000075864 1870 1.702 - 0.989 - - - - 0.713 - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
67. mafg2 mafg2 1041 1.7 - - - - - - 0.743 - 0.957
68. SNAP91 ENSDARG00000098809 556 1.699 - - - - - - 0.741 - 0.958 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
69. mex3b ENSDARG00000058369 1867 1.698 - - - - - - 0.817 - 0.881 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
70. papss1 ENSDARG00000057099 809 1.697 - - - - - - 0.773 - 0.924 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
71. nob1 ENSDARG00000016080 2483 1.692 - 0.978 - - - 0.714 - - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
72. si:dkey-114c15.7 237 1.691 - - - - - - 0.740 - 0.951 si:dkey-114c15.7
73. her15.2 her15.2 1701 1.685 - - - - - - 0.885 - 0.800
74. rnf7 ENSDARG00000055524 3390 1.685 - 0.974 - - - - 0.711 - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
75. ankrd13c ENSDARG00000103831 3593 1.685 - 0.973 0.712 - - - - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
76. irx5a ENSDARG00000034043 1694 1.683 - - - - - - 0.790 - 0.893 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
77. xpr1 xpr1 840 1.679 - - - - - - 0.846 - 0.833
78. zgc:113348 ENSDARG00000103795 1351 1.678 - - - - - - 0.730 - 0.948 zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
79. scg2a 800 1.677 - - - - - 0.790 0.887 - - secretogranin II (chromogranin C) a
80. sox5 ENSDARG00000011582 3632 1.677 0.755 - - - - - - - 0.922 SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
81. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.677 - - - - - 0.782 0.895 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
82. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.676 - - - - - - 0.760 - 0.916 FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
83. ddx41 666 1.674 - - - - - 0.746 - - 0.928 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
84. cacna1ba ENSDARG00000021735 870 1.671 - - - - - 0.742 - - 0.929 calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
85. BX511121.1 ENSDARG00000029997 1774 1.667 - - - - - 0.755 0.912 - -
86. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.667 - - - - - 0.714 - - 0.953 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
87. ncam2 ENSDARG00000017466 175 1.665 - - - - - - 0.718 - 0.947 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
88. abca1a ENSDARG00000074635 1085 1.665 - - - - - 0.762 - - 0.903 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
89. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.664 - - 0.767 - - - - - 0.897 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
90. nadl1.2 695 1.662 - - - - - - 0.735 - 0.927 neural adhesion molecule L1.2, transcript variant X1
91. CABZ01080599.2 CABZ01080599.2 192 1.662 - - - - - 0.852 0.810 - -
92. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 1.657 0.702 - - - - - - - 0.955 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
93. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.655 - - - - - - 0.823 - 0.832 immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
94. urp1 ENSDARG00000093493, ENSDARG00000109394, ENSDARG00000114654 637 1.651 0.810 - - - - - 0.841 - - urotensin-related peptide 1 [Source:ZFIN;Acc:ZDB-GENE-100922-138]
95. tmem59l ENSDARG00000003655 1536 1.649 - - - - - - 0.704 - 0.945 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
96. CABZ01029738.1 CABZ01029738.1 327 1.648 - - - - - 0.757 0.891 - -
97. sulf1 ENSDARG00000038428 2748 1.647 0.830 - - - - - 0.817 - - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
98. b4galt6 ENSDARG00000010301 2005 1.644 - - 0.810 - - - - - 0.834 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
99. clstn1 ENSDARG00000031720 5286 1.644 - - - - - 0.736 0.908 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
100. si:dkey-169l5.3 si:dkey-169l5.3 239 1.64 - - - - - 0.808 0.832 - -

There are 1921 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA