Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ntd5

Gene Name Gene ID Reads Annotation
ntd5 ENSDARG00000040944 4988 ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]










Genes with expression patterns similar to ntd5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ntd5 ENSDARG00000040944 4988 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
2. pi15a ENSDARG00000045378 2361 4.277 0.886 0.776 - 0.863 - 0.913 0.839 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
3. BX470254.1 ENSDARG00000097402 1389 4.032 0.852 0.710 - - - 0.791 0.881 0.798 -
4. epyc ENSDARG00000056950 7783 3.592 0.954 0.816 - - - 0.887 0.935 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
5. col9a3 ENSDARG00000037845 6564 3.54 0.908 0.771 - - - 0.916 0.945 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
6. CABZ01044297.1 CABZ01044297.1 2015 3.501 0.896 0.744 - - - 0.928 0.933 - -
7. PAQR4 PAQR4 2150 3.422 0.911 0.704 - - - 0.875 0.932 - -
8. ntla ntla 926 3.365 0.836 0.753 - - - 0.874 0.902 - -
9. ppp1r14c ENSDARG00000077341 1587 3.292 0.743 0.763 0.920 - 0.866 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
10. serpinh1b ENSDARG00000019949 11693 3.05 - - - 0.794 0.730 0.791 0.735 - - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
11. si:dkeyp-12a9.5 3058 2.787 0.936 - - - - 0.896 0.955 - - si:dkeyp-12a9.5
12. CABZ01074130.1 ENSDARG00000105274 26501 2.75 - - 0.971 0.908 0.871 - - - -
13. CABZ01079764.1 CABZ01079764.1 12103 2.659 0.872 - - - - 0.908 0.879 - -
14. plcl1 ENSDARG00000067676 2457 2.646 - 0.848 - - - 0.895 0.903 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
15. tgfbi ENSDARG00000071586 17779 2.646 0.877 - - - - 0.908 0.861 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
16. col11a2 ENSDARG00000012422 3204 2.64 0.941 0.758 - - - - 0.941 - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
17. hoxa13a ENSDARG00000100312 543 2.63 - - - 0.959 0.845 - - - 0.826 homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
18. si:dkeyp-118a3.2 ENSDARG00000086957 2106 2.614 0.938 - - - - 0.856 0.820 - - si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
19. chad ENSDARG00000045071 903 2.584 0.788 - - - - 0.886 0.910 - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
20. BX649554.3_1 BX649554.3_1 1071 2.584 - - - 0.799 - - - 0.914 0.871
21. plod2 ENSDARG00000011821 1656 2.575 0.802 - - - - 0.843 0.930 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
22. COBLL1_1 COBLL1_1 787 2.557 0.852 - - - - 0.853 0.852 - -
23. ecm2 ENSDARG00000071549 1527 2.543 - - 0.965 - 0.752 - - - 0.826 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
24. col27a1a 1747 2.514 - 0.730 - - - 0.842 0.942 - - collagen, type XXVII, alpha 1a
25. acana ENSDARG00000035891 118 2.504 0.796 - - - - 0.819 0.889 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
26. kazald2 ENSDARG00000078518 3062 2.501 - - - 0.745 0.897 - - - 0.859 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
27. golim4b ENSDARG00000014545 628 2.499 0.802 - - - - 0.771 0.926 - - golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
28. matn3b ENSDARG00000069265 856 2.475 - 0.748 - - - 0.867 0.860 - - matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
29. loxl5b ENSDARG00000076904 468 2.47 0.717 - - - 0.884 - 0.869 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
30. tppp3 ENSDARG00000030463 992 2.465 0.732 - - - - 0.870 0.863 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
31. CU972452.1 CU972452.1 1046 2.463 - 0.734 - - - 0.852 0.877 - -
32. sncga ENSDARG00000034423, ENSDARG00000112260 5469 2.461 - 0.717 - - - 0.865 0.879 - - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
33. IGSF10 ENSDARG00000077497 317 2.441 0.781 - - - - 0.782 0.878 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
34. lepre1 lepre1 5346 2.429 - - 0.885 - 0.713 - - 0.831 -
35. zgc:92061 zgc:92061 21304 2.396 - - - 0.942 0.754 - - 0.700 -
36. susd5 ENSDARG00000088277 439 2.394 0.810 - - - - 0.827 0.757 - - sushi domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-120215-196]
37. si:dkey-6n6.1 ENSDARG00000062487 222 2.387 0.748 - - - - 0.890 0.749 - - si:dkey-6n6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-80]
38. smtnl1 ENSDARG00000041257 7410 2.387 0.830 - - - - 0.733 0.824 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
39. vwde ENSDARG00000103443 5758 2.387 - - - - - 0.738 0.908 0.741 - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
40. col4a4 ENSDARG00000002831 803 2.387 - - - 0.822 0.729 - - - 0.836 collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
41. myhc4 ENSDARG00000035438 1322 2.386 0.785 - - - - 0.769 0.832 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
42. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 2.375 - - - - 0.902 - 0.772 - 0.701 mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
43. tgm2l ENSDARG00000093381 218 2.355 0.745 - - - - 0.773 0.837 - - transglutaminase 2, like [Source:ZFIN;Acc:ZDB-GENE-050420-97]
44. shha ENSDARG00000068567, ENSDARG00000111447 1497 2.352 0.801 - - - - 0.840 0.711 - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
45. CR847510.1 CR847510.1 629 2.343 - 0.715 - - - 0.832 0.796 - -
46. smpx ENSDARG00000045302 2175 2.342 0.783 - - - - 0.732 0.827 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
47. PLXDC2 ENSDARG00000059950 220 2.335 0.804 - - - - 0.724 0.807 - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
48. lgals1l1 ENSDARG00000088711 4515 2.334 0.841 0.748 - - - - 0.745 - - lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
49. lgals2a ENSDARG00000054942 888 2.311 0.722 - - - - 0.816 0.773 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
50. bcam ENSDARG00000090190 39912 2.307 - - 0.783 0.740 0.784 - - - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
51. ehd2 ehd2 1089 2.307 - 0.710 - - - 0.758 0.839 - -
52. dtnba ENSDARG00000077694 5483 2.297 0.724 0.756 - - - 0.817 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
53. mxra8a ENSDARG00000062222 530 2.296 0.818 - - - - 0.759 0.719 - - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
54. sox9a ENSDARG00000003293 812 2.294 0.747 - - - - 0.737 0.810 - - SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
55. MUSTN1 MUSTN1 1882 2.288 0.750 0.704 - - - - 0.834 - -
56. tnnc1b ENSDARG00000037539 13945 2.269 - 0.724 - - - 0.703 0.842 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
57. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.269 0.811 0.717 - - - 0.741 - - -
58. srl ENSDARG00000104587 11126 2.262 0.708 0.706 - - - - 0.848 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
59. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 2.26 - - - - 0.755 0.708 - 0.797 - angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
60. COL13A1 1565 2.247 - - - 0.722 0.733 - - 0.792 - collagen, type XIII, alpha 1, transcript variant X1
61. pygma ENSDARG00000055518 15972 2.207 0.719 0.717 - - - - 0.771 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
62. tgm1l1 ENSDARG00000102106 1437 2.156 0.703 0.702 - - - - 0.751 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
63. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 1.885 0.960 - - - - 0.925 - - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
64. hoxc13a ENSDARG00000070353 4815 1.867 - - - 0.936 0.931 - - - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
65. col2a1a ENSDARG00000069093, ENSDARG00000111202 50276 1.85 0.946 - - - - 0.904 - - - collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]
66. BX511121.1 ENSDARG00000029997 1774 1.806 - - - 0.918 0.888 - - - -
67. frem2a ENSDARG00000076856 11022 1.777 - - - 0.871 0.906 - - - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
68. sptlc3 ENSDARG00000030743 596 1.763 - - 0.906 - - - - - 0.857 serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
69. fam46bb 601 1.757 - - - - - 0.866 0.891 - - family with sequence similarity 46, member Bb
70. rarga ENSDARG00000034117 1238 1.75 - - 0.917 - 0.833 - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
71. crabp1b ENSDARG00000035904 2753 1.748 - - - 0.946 0.802 - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
72. tgfb3 ENSDARG00000019367 2327 1.747 - - - - - 0.864 0.883 - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
73. cdkl1 ENSDARG00000017329 3345 1.738 - - - 0.916 0.822 - - - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
74. lect1 7551 1.731 0.938 0.793 - - - - - - - leukocyte cell derived chemotaxin 1, transcript variant X1
75. lpar1 ENSDARG00000099840 2010 1.726 - - 0.931 - 0.795 - - - - lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]
76. col9a2 ENSDARG00000024492 20234 1.723 0.935 - - - - 0.788 - - - procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
77. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.722 - - 0.931 - 0.791 - - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
78. BX842614.2 BX842614.2 799 1.721 - - - - - 0.922 0.799 - -
79. agtr1b ENSDARG00000045443 232 1.717 - - - - - - - 0.826 0.891 angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
80. and1 ENSDARG00000088514 37603 1.715 - - - 0.787 0.928 - - - - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
81. arpc5a ENSDARG00000039142 5482 1.711 - - 0.923 - - - - 0.788 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
82. ltbp3 325 1.709 - 0.797 - - - - 0.912 - - latent transforming growth factor beta binding protein 3, transcript variant X3
83. cyr61l1 ENSDARG00000035422, ENSDARG00000112039, ENSDARG00000114683 332 1.706 0.859 - - - - - 0.847 - - cysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
84. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 1.701 - - 0.897 - - - - 0.804 - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
85. cmn ENSDARG00000055527 14039 1.694 0.956 - - - - 0.738 - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
86. matn4 ENSDARG00000015947 10967 1.692 0.839 - - - - - 0.853 - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
87. ism1 ENSDARG00000020541 1241 1.689 - - - - - 0.865 0.824 - - isthmin 1 [Source:ZFIN;Acc:ZDB-GENE-050523-3]
88. loxl1 ENSDARG00000054451 2485 1.681 - 0.771 - - - 0.910 - - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
89. tgm2a ENSDARG00000070157 4516 1.67 0.800 - - - - - 0.870 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
90. twist3 ENSDARG00000019646 1221 1.666 - - 0.934 - - - - - 0.732 twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
91. COLGALT2 ENSDARG00000014670 63 1.666 - - - - - 0.837 0.829 - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
92. lmna ENSDARG00000013415 1562 1.658 - - 0.948 0.710 - - - - - lamin A [Source:ZFIN;Acc:ZDB-GENE-020424-3]
93. zgc:194470 zgc:194470 210 1.658 0.842 - - - - 0.816 - - -
94. AIFM2 ENSDARG00000077549 1419 1.656 - - 0.907 - - - - 0.749 - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
95. eng1a eng1a 484 1.652 - - - - - 0.825 0.827 - -
96. zgc:92360 ENSDARG00000038151 2161 1.647 - - 0.924 - - - - - 0.723 zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
97. zgc:86725 2559 1.645 0.868 - - - - 0.777 - - - zgc:86725
98. TIFA TIFA 1519 1.644 - - 0.897 - 0.747 - - - -
99. mxra8b ENSDARG00000062129 1004 1.642 - - 0.904 - 0.738 - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
100. plod1a ENSDARG00000059746 3364 1.642 - - - - - 0.833 0.809 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]

There are 1350 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA