Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nsmce1

Gene Name Gene ID Reads Annotation
nsmce1 ENSDARG00000098780 289 NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]










Genes with expression patterns similar to nsmce1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nsmce1 ENSDARG00000098780 289 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NSE1 homolog, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-040718-289]
2. CR388231.1 ENSDARG00000098710 153 2.181 0.751 0.711 - - - 0.719 - - -
3. traip ENSDARG00000011262 410 1.699 - 0.862 - - - - - 0.837 - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
4. fabp11a_1 ENSDARG00000017299 387 1.665 - 0.938 - - - 0.727 - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
5. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.648 - 0.843 - - - 0.805 - - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
6. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.63 - 0.832 - - - 0.798 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
7. mmp15a ENSDARG00000051962 932 1.587 - 0.761 - - - 0.826 - - - matrix metallopeptidase 15a [Source:ZFIN;Acc:ZDB-GENE-070817-4]
8. dmtn ENSDARG00000013110 791 1.585 - 0.801 - - - - 0.784 - - dematin actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9438]
9. retsatl ENSDARG00000034989 41 1.577 - 0.779 - - - 0.798 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
10. CNOT4_1 CNOT4_1 697 1.575 - 0.864 - - - - 0.711 - -
11. si:dkey-264b2.3 19 1.573 - 0.786 - - - 0.787 - - - si:dkey-264b2.3, transcript variant X2
12. bmpr2a ENSDARG00000011941 2972 1.57 - - - - - 0.823 0.747 - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
13. LSM5 ENSDARG00000071573 371 1.569 - 0.760 - - - 0.809 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
14. ppp1r15a ENSDARG00000069135 871 1.568 - - - - - 0.763 0.805 - - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
15. cobl_1 ENSDARG00000091006 293 1.562 - 0.711 - - - - 0.851 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
16. haao ENSDARG00000076487 143 1.56 - - - - - - 0.852 0.708 - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
17. si:ch211-215p11.4 si:ch211-215p11.4 67 1.555 - - - - - 0.746 0.809 - -
18. BACH1 BACH1 1021 1.553 - 0.766 - - - 0.787 - - -
19. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.548 - 0.821 - - - 0.727 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
20. PEG3_40 PEG3_40 186 1.544 - 0.745 - - - 0.799 - - -
21. CU929133.1 CU929133.1 94 1.542 - - - - - 0.837 - 0.705 -
22. dpp6b ENSDARG00000024744 234 1.54 0.797 - - - - 0.743 - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
23. pigu ENSDARG00000075530 348 1.537 - 0.798 - - - - 0.739 - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
24. CU856359.2 CU856359.2 182 1.537 - - - - - 0.716 - 0.821 -
25. CU638738.1 CU638738.1 131 1.535 - 0.754 - - - 0.781 - - -
26. dbpa ENSDARG00000063014 107 1.52 - 0.786 - - - 0.734 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
27. si:ch211-207m11.2 si:ch211-207m11.2 63 1.517 0.707 0.810 - - - - - - -
28. cpsf4 ENSDARG00000020217 764 1.517 - 0.709 - - - - 0.808 - - cleavage and polyadenylation specific factor 4 [Source:ZFIN;Acc:ZDB-GENE-990415-180]
29. zic3 ENSDARG00000071497 1448 1.516 0.746 - - - - 0.770 - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
30. e4f1 ENSDARG00000038243 160 1.514 - - - - - 0.804 0.710 - - E4F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050913-103]
31. chka ENSDARG00000041078, ENSDARG00000115973 468 1.512 - 0.760 - - - - 0.752 - - choline kinase alpha [Source:ZFIN;Acc:ZDB-GENE-050208-149]
32. KCNS1 KCNS1 24 1.511 0.707 - - - - 0.804 - - -
33. prcp ENSDARG00000037883 473 1.51 - 0.784 - - - - 0.726 - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
34. si:ch73-61d6.3 ENSDARG00000057826 274 1.51 - 0.728 - - - - 0.782 - - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
35. tubgcp2 ENSDARG00000013079 1520 1.508 - - - - - 0.730 0.778 - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
36. rbms3 ENSDARG00000044574 2514 1.492 - - - - - 0.790 0.702 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
37. il17rd ENSDARG00000098359 1153 1.491 - - - - - 0.713 - 0.778 - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
38. shank3b ENSDARG00000063054 148 1.489 - 0.783 - - - - 0.706 - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
39. mir10b-2 116 1.488 0.701 - - - - 0.787 - - - microRNA 10b-2
40. pknox2 ENSDARG00000055349 784 1.481 0.736 - - - - 0.745 - - - pbx/knotted 1 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-031118-112]
41. dnajb1a ENSDARG00000099383 871 1.473 - 0.740 - - - - 0.733 - - DnaJ (Hsp40) homolog, subfamily B, member 1a [Source:ZFIN;Acc:ZDB-GENE-040801-90]
42. TRIM35_7 TRIM35_7 22 1.468 0.707 - - - - - - 0.761 -
43. pygl ENSDARG00000002197 192 1.461 - - - - - - 0.759 0.702 - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
44. KIF21A_1 KIF21A_1 237 1.457 - 0.722 - - - 0.735 - - -
45. zgc:110821 ENSDARG00000077085 210 1.455 - - - - - 0.734 - 0.721 - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
46. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.454 - 0.732 - - - 0.722 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
47. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.437 - 0.719 - - - - - 0.718 - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
48. slc45a4 ENSDARG00000077326 481 1.433 - - - - - 0.706 - 0.727 - solute carrier family 45, member 4 [Source:ZFIN;Acc:ZDB-GENE-091230-5]
49. naif1 ENSDARG00000062753 176 1.425 - 0.712 - - - 0.713 - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
50. avpr1b avpr1b 58 1.417 0.707 - - - - 0.710 - - -
51. si:dkey-48n15.2 si:dkey-48n15.2 297 0.968 - 0.968 - - - - - - -
52. arhgap31 ENSDARG00000059472 23 0.966 - 0.966 - - - - - - - Rho GTPase activating protein 31 [Source:ZFIN;Acc:ZDB-GENE-100922-256]
53. cyp1a ENSDARG00000098315 273 0.954 - 0.954 - - - - - - - cytochrome P450, family 1, subfamily A [Source:ZFIN;Acc:ZDB-GENE-011219-1]
54. cuedc2 ENSDARG00000039365 484 0.952 - 0.952 - - - - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
55. usp11 ENSDARG00000076303 183 0.951 - 0.951 - - - - - - - ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]
56. TENM3 ENSDARG00000005479 39 0.938 - 0.938 - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
57. si:ch211-273j9.2 si:ch211-273j9.2 79 0.934 - 0.934 - - - - - - -
58. agxta ENSDARG00000052099 65 0.934 - 0.934 - - - - - - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
59. SLC3A2 SLC3A2 135 0.929 - 0.929 - - - - - - -
60. ZNF385D ENSDARG00000086162 202 0.926 - 0.926 - - - - - - - zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
61. si:ch211-162i8.5 ENSDARG00000111716 76 0.923 - - - - - 0.923 - - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
62. gata2a ENSDARG00000059327 326 0.92 - 0.920 - - - - - - - GATA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-260]
63. sdccag8 ENSDARG00000078947 68 0.92 - 0.920 - - - - - - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
64. fam155a ENSDARG00000075858 91 0.917 - - - - - 0.917 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
65. plcd3a ENSDARG00000052957 467 0.917 - - - - - - 0.917 - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
66. FAM98C FAM98C 225 0.916 - - - - - - 0.916 - -
67. tesk2 ENSDARG00000061450 261 0.915 - 0.915 - - - - - - - testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
68. bpnt1 ENSDARG00000043684 78 0.915 - 0.915 - - - - - - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
69. si:dkey-276l13.6 si:dkey-276l13.6 71 0.915 0.915 - - - - - - - -
70. cables1 ENSDARG00000099395 361 0.913 - - - - - 0.913 - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
71. CABZ01061146.1 CABZ01061146.1 28 0.908 - - - - - 0.908 - - -
72. IGFN1_1 IGFN1_1 29 0.903 - - - - - 0.903 - - -
73. fam132a fam132a 498 0.902 - - - - - 0.902 - - -
74. efcab7 ENSDARG00000020279 1030 0.901 - 0.901 - - - - - - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
75. kin ENSDARG00000045515 109 0.9 - 0.900 - - - - - - - Kin17 DNA and RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3689]
76. rfc5 ENSDARG00000035634 974 0.9 0.900 - - - - - - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
77. dok1b ENSDARG00000099177 163 0.898 - 0.898 - - - - - - - docking protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2063]
78. zhx2 zhx2 365 0.898 - - - - - 0.898 - - -
79. camk4 ENSDARG00000005372 118 0.897 - 0.897 - - - - - - - calcium/calmodulin-dependent protein kinase IV [Source:ZFIN;Acc:ZDB-GENE-050417-76]
80. r3hdm4 ENSDARG00000063254 201 0.897 0.897 - - - - - - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
81. snx29 ENSDARG00000077317 239 0.895 - - - - - 0.895 - - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
82. si:ch73-196k8.2 si:ch73-196k8.2 427 0.895 - - - - - - 0.895 - -
83. wdtc1 ENSDARG00000059760 1218 0.892 - - - - - - 0.892 - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
84. C18H16orf70 C18H16orf70 542 0.891 - - - - - 0.891 - - -
85. DENND1A ENSDARG00000014592 436 0.89 - - - - - - 0.890 - - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
86. morn3 ENSDARG00000021697, ENSDARG00000110843 93 0.888 - 0.888 - - - - - - - MORN repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-152]
87. phf3 ENSDARG00000034768 1372 0.888 - - - - - 0.888 - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
88. heatr5a ENSDARG00000023999 278 0.888 - - - - - - 0.888 - - HEAT repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030616-152]
89. rwdd2b ENSDARG00000055426 294 0.887 - 0.887 - - - - - - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
90. nme5 ENSDARG00000041617 135 0.887 - 0.887 - - - - - - - NME/NM23 family member 5 [Source:ZFIN;Acc:ZDB-GENE-040718-221]
91. TMEM128 552 0.886 - - - - - 0.886 - - - transmembrane protein 128
92. si:dkey-6f10.3 ENSDARG00000093660 116 0.885 - - - - - 0.885 - - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
93. calhm2 ENSDARG00000039482 138 0.885 - - - - - 0.885 - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
94. efna2 efna2 428 0.885 - - - - - 0.885 - - -
95. spag1a ENSDARG00000004017 1140 0.884 - - - - - 0.884 - - - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
96. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 0.884 - - - - - 0.884 - - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
97. tenm1 ENSDARG00000003403 148 0.883 - 0.883 - - - - - - - teneurin transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060531-26]
98. BX294110.1 ENSDARG00000096875 1761 0.883 - - - - - 0.883 - - -
99. gtf3c3 ENSDARG00000043247 202 0.881 - - - - - 0.881 - - - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
100. irak3 ENSDARG00000053131 16 0.88 - 0.880 - - - - - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]

There are 1446 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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