Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nsd1a

Gene Name Gene ID Reads Annotation
nsd1a ENSDARG00000060016 2974 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]










Genes with expression patterns similar to nsd1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nsd1a ENSDARG00000060016 2974 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
2. prmt1 ENSDARG00000010246 11311 3.046 - - 0.704 - - 0.703 0.769 0.870 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
3. sar1b ENSDARG00000103403 1699 2.906 0.736 - - 0.719 - - 0.704 - 0.747 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
4. rbm8a ENSDARG00000016516 8789 2.583 - - - - - 0.830 0.880 - 0.873 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
5. NIPBL NIPBL 871 2.465 - - - 0.744 - 0.822 0.899 - -
6. klc2 3058 2.455 - - - 0.796 - 0.793 - - 0.866 kinesin light chain 2
7. sart3 ENSDARG00000008032 2594 2.405 - - 0.711 0.828 - - - 0.866 - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
8. ZNF618 ENSDARG00000071469 2347 2.401 - - - 0.801 - 0.801 - 0.799 - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
9. kmt2bb ENSDARG00000060697 5230 2.4 - - 0.728 0.910 - - - 0.762 - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
10. actr1 ENSDARG00000011611 3879 2.393 - - - - - 0.789 - 0.734 0.870 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
11. ppig ENSDARG00000044431 3427 2.343 - - 0.709 0.873 - - 0.761 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
12. zzz3 ENSDARG00000077581 1343 2.281 - - 0.718 0.746 - - 0.817 - - zinc finger, ZZ-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6450]
13. whsc1l1 8544 2.216 - - - - - 0.783 0.728 0.705 - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
14. u2af2a ENSDARG00000012505 2920 2.182 - 0.759 - 0.709 - - 0.714 - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
15. gnb1b ENSDARG00000104372 1077 2.151 - - - - - 0.713 0.722 0.716 - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
16. SPTBN4_1 ENSDARG00000092624 473 1.785 - - - 0.845 - - - 0.940 - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
17. cstf1 ENSDARG00000044820 1663 1.721 - - - - - - - 0.882 0.839 cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
18. cwc25 ENSDARG00000003382 2134 1.721 - - - 0.912 - - - 0.809 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
19. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.715 - - - - - - 0.853 0.862 - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
20. PPP1R8 PPP1R8 1897 1.701 - 0.818 - - - - - 0.883 -
21. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.695 - - - 0.786 - - - 0.909 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
22. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.694 - - - 0.870 - - - 0.824 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
23. trrap ENSDARG00000100623 3429 1.689 - - - - - - 0.874 0.815 - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
24. u2surp ENSDARG00000061490 2814 1.686 - - - - - 0.838 - - 0.848 U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
25. hif1an ENSDARG00000031915 2098 1.684 - - - 0.816 - - - 0.868 - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
26. si:dkey-19e4.5 ENSDARG00000089886 2562 1.667 - - - - - - 0.848 0.819 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
27. knop1 ENSDARG00000077721 2198 1.663 - - 0.761 - - - - 0.902 - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
28. sf3a1 ENSDARG00000041887 6702 1.651 - - - - - - 0.759 0.892 - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
29. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.649 - - - - - - 0.840 - 0.809 myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
30. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.645 - - - 0.829 - - 0.816 - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
31. cspg5a ENSDARG00000069981 1699 1.643 - - - 0.822 - - - 0.821 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
32. CACFD1 ENSDARG00000090818 1298 1.642 - 0.863 - - - - - 0.779 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
33. ube3b ENSDARG00000061960 978 1.64 - - - - - - - 0.873 0.767 ubiquitin protein ligase E3B [Source:ZFIN;Acc:ZDB-GENE-060526-231]
34. bahcc1 bahcc1 1934 1.635 - - - 0.828 - - 0.807 - -
35. luc7l ENSDARG00000055903 3357 1.634 - 0.838 - - - 0.796 - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
36. CCDC106 CCDC106 1908 1.631 - - - - - - 0.824 0.807 -
37. lsm14ab ENSDARG00000100553 3837 1.629 - - - - - 0.723 - 0.906 - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
38. pop7 ENSDARG00000036394 1684 1.629 - - - 0.747 - - 0.882 - - POP7 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-041010-88]
39. sh3glb2a ENSDARG00000008983 452 1.625 - 0.760 - - - - - 0.865 - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
40. CR548626.3 CR548626.3 423 1.621 - - - 0.871 - - - 0.750 -
41. fam219aa ENSDARG00000016396 1788 1.619 - - - - - - 0.714 0.905 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
42. caprin1b ENSDARG00000054272 7033 1.618 - - - - - 0.767 0.851 - - cell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
43. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.615 - - 0.718 - - - - 0.897 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
44. DTX2 ENSDARG00000032933, ENSDARG00000109243 909 1.615 - - - - - - 0.736 0.879 - deltex 2, E3 ubiquitin ligase [Source:ZFIN;Acc:ZDB-GENE-081022-150]
45. atf7ip ENSDARG00000069619 5495 1.614 - - - - - - - 0.833 0.781 activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
46. cdan1 ENSDARG00000042261 658 1.609 - - - 0.825 - - - 0.784 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
47. ppp2r1b ppp2r1b 3469 1.606 - - - 0.862 - - 0.744 - -
48. ENDOD1_5 ENDOD1_5 8723 1.603 - 0.775 - 0.828 - - - - -
49. sephs1 ENSDARG00000058292 3347 1.602 - - - 0.811 - 0.791 - - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
50. mier1a ENSDARG00000041072 1690 1.602 - - - 0.753 - - - 0.849 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
51. creb1b ENSDARG00000093420 524 1.6 - 0.715 - 0.885 - - - - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
52. nck2b ENSDARG00000043361 908 1.6 - 0.775 - 0.825 - - - - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
53. brd3a ENSDARG00000006527 1636 1.6 - - - - - 0.761 0.839 - - bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
54. CU570791.5 CU570791.5 872 1.595 - - - 0.853 - - 0.742 - -
55. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.595 - - - 0.817 - - - 0.778 - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
56. BX000999.4_1 BX000999.4_1 222 1.591 - - - 0.822 - - - 0.769 -
57. SENP1 SENP1 1122 1.59 - - - - - 0.731 - 0.859 -
58. tdg tdg 3269 1.589 - - - 0.802 - - - - 0.787
59. mapk6 ENSDARG00000032103 6422 1.589 - 0.806 - - - 0.783 - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
60. ephb4a ENSDARG00000100725 1749 1.587 - - - - - - 0.779 - 0.808 eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
61. PRRG1 ENSDARG00000043283 2779 1.587 - - - - - 0.818 - 0.769 - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
62. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.587 - - - 0.736 - - - - 0.851 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
63. celsr1b ENSDARG00000058259 1219 1.584 - - - - - 0.768 - 0.816 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
64. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.584 - - - - - - - 0.803 0.781 Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
65. gkap1 ENSDARG00000068123 2645 1.583 - - 0.739 - - - - - 0.844 G kinase anchoring protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2485]
66. plagx ENSDARG00000036855 3768 1.582 - - - 0.879 - - - 0.703 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
67. sae1 ENSDARG00000010487 2028 1.582 - - - - - - 0.762 0.820 - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
68. CWC15 ENSDARG00000013382 8969 1.581 - - - - - 0.751 - - 0.830 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
69. ccdc94 1417 1.581 - 0.752 - - - - - 0.829 - coiled-coil domain containing 94
70. max ENSDARG00000024844 6035 1.58 - - - 0.874 - - 0.706 - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
71. vps26b ENSDARG00000015823, ENSDARG00000116682 1023 1.578 - - - 0.828 - - 0.750 - - VPS26, retromer complex component B [Source:ZFIN;Acc:ZDB-GENE-040426-2699]
72. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.577 - 0.781 - - - - - 0.796 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
73. ube2e2 ENSDARG00000034670 5918 1.577 - - - 0.816 - - 0.761 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
74. C1H4orf27 C1H4orf27 1961 1.576 - 0.725 - - - - - 0.851 -
75. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.576 - - - - - 0.760 0.816 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
76. kdm1a ENSDARG00000060679 6152 1.575 - - 0.730 - - - - 0.845 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
77. prr12a ENSDARG00000074229 1668 1.574 - - - 0.830 - 0.744 - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
78. DTX3 DTX3 303 1.572 - - - 0.819 - 0.753 - - -
79. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.572 - - - 0.866 - - - 0.706 - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
80. dnajc5ab ENSDARG00000004836 2923 1.572 - - - 0.819 - - 0.753 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
81. prpf38a ENSDARG00000039213, ENSDARG00000116046 1537 1.571 - 0.825 - - - 0.746 - - - pre-mRNA processing factor 38A [Source:ZFIN;Acc:ZDB-GENE-040801-225]
82. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.57 - - 0.784 - - - 0.786 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
83. gatad2ab ENSDARG00000006192 2461 1.567 - - 0.791 0.776 - - - - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
84. prcc ENSDARG00000063252 2065 1.567 - - - - - 0.788 - - 0.779 proline rich mitotic checkpoint control factor [Source:ZFIN;Acc:ZDB-GENE-070717-1]
85. elavl1 11672 1.562 - - - - - 0.750 - - 0.812 ELAV like RNA binding protein 1, transcript variant X3
86. ss18 ENSDARG00000002970 2618 1.56 - - - - - 0.738 0.822 - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
87. bub1bb ENSDARG00000074927 1667 1.557 - - - 0.743 - - - 0.814 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
88. rbb4 rbb4 15541 1.556 - - 0.720 - - - - 0.836 -
89. hnrnpr ENSDARG00000014569 3423 1.552 - - - - - 0.774 - - 0.778 heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
90. abca1a ENSDARG00000074635 1085 1.551 - - - 0.850 - - 0.701 - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
91. zcchc10 ENSDARG00000091092 1333 1.55 - - - - - - 0.753 0.797 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
92. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.549 - - - - - - 0.720 - 0.829 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
93. ptenb ENSDARG00000056623 5783 1.548 - - - - - - 0.770 0.778 - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
94. hnrpl 6412 1.541 - - 0.749 - - 0.792 - - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
95. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 1.541 - - - 0.778 - - - 0.763 - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
96. dnmbp ENSDARG00000074121 2711 1.54 - - - - - 0.724 - 0.816 - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
97. E2F6 E2F6 1271 1.538 - - - - - - - 0.759 0.779
98. sin3ab ENSDARG00000059812 2140 1.538 - - - 0.757 - - - - 0.781 SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
99. sptlc2b ENSDARG00000074287 1853 1.538 - - - 0.788 - - - 0.750 - serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
100. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.538 - - - - - 0.712 0.826 - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]

There are 1821 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA