Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nrxn3b

Gene Name Gene ID Reads Annotation
nrxn3b ENSDARG00000062693 192 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]










Genes with expression patterns similar to nrxn3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrxn3b ENSDARG00000062693 192 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
2. st8sia5 ENSDARG00000036584 529 3.518 0.713 - - - - 0.851 0.973 - 0.981 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
3. vgf ENSDARG00000105529 247 3.463 0.887 0.947 - - - 0.747 0.882 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
4. SPOCK1 ENSDARG00000074644 794 3.376 0.817 0.887 - - - 0.784 0.888 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
5. prrt1 ENSDARG00000062208 368 3.32 0.850 0.721 - - - 0.858 0.891 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
6. rusc1 ENSDARG00000078125 617 3.319 0.869 - - - - 0.773 0.743 - 0.934 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
7. lhx5 ENSDARG00000057936 785 3.317 0.753 - - - - 0.890 0.896 - 0.778 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
8. dtnbb ENSDARG00000013020 280 3.278 0.824 0.915 - - - 0.786 0.753 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
9. rbfox3 rbfox3 1443 3.267 0.852 - - - - 0.792 0.774 - 0.849
10. stx1b ENSDARG00000000503 2724 3.254 0.797 0.746 - - - 0.880 0.831 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
11. stmn2a ENSDARG00000033234 2272 3.202 0.790 - - - - 0.872 0.792 - 0.748 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
12. kcnn1a ENSDARG00000091306 95 3.193 0.768 0.721 - - - 0.718 0.986 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
13. slc1a2b ENSDARG00000102453 3136 3.149 0.780 - - - - 0.874 0.763 - 0.732 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
14. dnm1b ENSDARG00000009281 219 3.11 0.753 0.864 - - - 0.755 0.738 - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
15. irx1b ENSDARG00000056594 2224 3.056 0.787 - - - - 0.705 0.835 - 0.729 iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
16. SNAP91 ENSDARG00000098809 556 2.761 - - - - - 0.886 0.885 - 0.990 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
17. jph3 ENSDARG00000102204 175 2.741 0.836 - - - - - 0.925 - 0.980 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
18. TUBB8P7_1 TUBB8P7_1 2722 2.701 0.845 - - - - 0.909 0.947 - -
19. adam23a ENSDARG00000062323 580 2.694 0.827 - - - - 0.912 0.955 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
20. stmn1b ENSDARG00000033655 9491 2.681 0.955 - - - - 0.861 0.865 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
21. pcdh1gc5 ENSDARG00000104826 10052 2.644 0.837 - - - - 0.885 0.922 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
22. SYT2 ENSDARG00000014169 265 2.622 0.855 0.937 - - - - 0.830 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
23. ckbb ENSDARG00000043257 3503 2.62 0.860 - - - - 0.864 0.896 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
24. rab3ab ENSDARG00000043835 1267 2.616 0.804 - - - - 0.933 0.879 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
25. st8sia2 ENSDARG00000018788 2183 2.611 - - - - - 0.757 0.952 - 0.902 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
26. snap25a ENSDARG00000020609 4537 2.596 0.835 - - - - 0.926 0.835 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
27. cers6 ENSDARG00000053583 247 2.595 0.754 - - - - 0.908 0.933 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
28. syt11a ENSDARG00000057913 1145 2.594 0.833 - - - - 0.827 0.934 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
29. mllt11 ENSDARG00000071026 2518 2.589 0.846 - - - - 0.883 0.860 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
30. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.578 0.843 - - - - 0.796 0.939 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
31. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.574 0.875 - - - - 0.914 0.785 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
32. plp1a ENSDARG00000103732 3544 2.564 0.818 - - - - 0.823 0.923 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
33. gap43 ENSDARG00000099744 4114 2.564 0.870 - - - - 0.870 0.824 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
34. pcsk1nl ENSDARG00000076170 1232 2.563 0.792 - - - - 0.835 0.936 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
35. gng3 ENSDARG00000009553 2530 2.555 0.951 0.715 - - - - 0.889 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
36. tuba1c ENSDARG00000055216 8384 2.554 0.824 - - - - 0.871 0.859 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
37. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.552 0.837 - - - - 0.879 0.836 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
38. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.55 0.888 - - - - 0.855 0.807 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
39. slc1a3a ENSDARG00000104431 9888 2.546 0.848 - - - - 0.878 0.820 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
40. atp2b3b ENSDARG00000023445 1424 2.543 0.717 - - - - 0.860 0.966 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
41. nrn1a ENSDARG00000071860 1311 2.542 0.795 - - - - 0.859 0.888 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
42. rap2ip rap2ip 681 2.54 0.732 - - - - 0.857 0.951 - -
43. necap1 ENSDARG00000020798 612 2.537 0.720 - - - - 0.879 0.938 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
44. mapk12b ENSDARG00000006409 2246 2.536 0.840 - - - - 0.832 0.864 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
45. vsnl1a ENSDARG00000023228 1584 2.533 0.883 - - - - 0.883 0.767 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
46. AKT3 AKT3 1729 2.531 - - - - - 0.862 0.871 - 0.798
47. atp6v0cb ENSDARG00000036577 3472 2.531 0.823 - - - - 0.842 0.866 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
48. rtn1b ENSDARG00000021143 1682 2.53 0.870 - - - - 0.884 0.776 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
49. tmem59l ENSDARG00000003655 1536 2.525 0.738 - - - - - 0.846 - 0.941 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
50. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.522 0.937 - - - - 0.867 0.718 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
51. MAP1A MAP1A 847 2.519 0.868 - - - - 0.938 0.713 - -
52. nmnat2 ENSDARG00000004580 370 2.515 0.810 - - - - 0.889 0.816 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
53. gfap ENSDARG00000025301 5584 2.513 0.782 - - - - 0.865 0.866 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
54. pou4f1 ENSDARG00000005559 821 2.508 0.851 - - - - 0.767 0.890 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
55. gabra5 ENSDARG00000070730 156 2.506 0.755 - - - - 0.870 0.881 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
56. ksr2 ENSDARG00000094526 134 2.501 - 0.838 - - - 0.717 0.946 - - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
57. nadl1.1 1200 2.5 0.773 - - - - 0.783 0.944 - - neural adhesion molecule L1.1, transcript variant X1
58. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.498 0.804 - - - - 0.921 0.773 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
59. olfm1b ENSDARG00000014053 1392 2.494 0.800 - - - - 0.880 0.814 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
60. EFCC1 ENSDARG00000077826 1359 2.494 0.857 - - - - 0.785 0.852 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
61. TUSC5_1 TUSC5_1 320 2.489 0.717 0.908 - - - 0.864 - - -
62. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.489 0.745 - - - - 0.872 0.872 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
63. mdkb ENSDARG00000020708 5393 2.489 0.813 - - - - 0.865 0.811 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
64. TUBB8P7_2 TUBB8P7_2 565 2.486 0.703 - - - - - 0.805 - 0.978
65. eno2 ENSDARG00000014287 2162 2.481 0.742 - - - - 0.823 0.916 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
66. BX957337.1 BX957337.1 1685 2.48 0.804 - - - - 0.872 0.804 - -
67. celf4 ENSDARG00000070045 1537 2.48 0.810 0.754 - - - - 0.916 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
68. TUBA1A ENSDARG00000001889 25294 2.478 0.730 - - - - 0.851 0.897 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
69. slc6a1b ENSDARG00000039647 1301 2.475 0.821 - - - - 0.762 0.892 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
70. negr1 ENSDARG00000021607 1051 2.473 0.905 - - - - 0.774 0.794 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
71. EML6 250 2.468 0.791 - - - - 0.744 0.933 - - echinoderm microtubule associated protein like 6
72. amph ENSDARG00000007663 599 2.467 0.800 - - - - 0.914 0.753 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
73. dpysl3 ENSDARG00000002587 4381 2.463 0.830 - - - - 0.790 0.843 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
74. her15.2 her15.2 1701 2.46 - - - - - 0.773 0.926 - 0.761
75. nkx1.2lb ENSDARG00000099427 220 2.46 - 0.942 - - - 0.816 0.702 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
76. dnajc5aa ENSDARG00000042948 2885 2.455 0.834 - - - - 0.818 0.803 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
77. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 2.452 0.878 - - - - 0.816 0.758 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
78. SEMA7A ENSDARG00000078707 465 2.451 0.713 - - - - 0.850 0.888 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
79. Sep-03 Sep-03 1124 2.451 0.717 - - - - 0.823 0.911 - -
80. ntrk2a ENSDARG00000059897 185 2.45 0.922 - - - - 0.714 0.814 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
81. nova2 ENSDARG00000017673 7685 2.442 0.764 - - - - 0.797 0.881 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
82. tox ENSDARG00000032317 9126 2.44 0.824 - - - - 0.780 0.836 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
83. cnrip1a ENSDARG00000091683 1491 2.438 0.777 - - - - 0.803 0.858 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
84. adcyap1b ENSDARG00000027740 1539 2.438 0.785 - - - - 0.861 0.792 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
85. zic4 ENSDARG00000031307 1228 2.437 0.736 - - - - 0.856 0.845 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
86. MAPK8IP1_1 MAPK8IP1_1 186 2.437 0.875 - - - - 0.845 0.717 - -
87. sncgb ENSDARG00000109715 1014 2.435 0.734 - - - - 0.907 0.794 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
88. TUBB2A TUBB2A 142 2.432 0.743 - - - - 0.845 0.844 - -
89. scn8aa ENSDARG00000005775 792 2.432 0.867 0.717 - - - 0.848 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
90. fzd3a ENSDARG00000021664 1958 2.431 0.797 - - - - 0.863 0.771 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
91. clstn3 ENSDARG00000073883 590 2.428 0.904 - - - - 0.785 0.739 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
92. slc32a1 ENSDARG00000059775 1092 2.426 0.763 - - - - 0.878 0.785 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
93. si:dkey-100n10.2 101 2.426 0.765 - - - - 0.786 0.875 - - si:dkey-100n10.2
94. nrxn2a ENSDARG00000061454 291 2.421 0.716 0.942 - - - 0.763 - - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
95. slc17a6b ENSDARG00000041150 823 2.416 0.857 - - - - 0.841 0.718 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
96. ppp3ca ENSDARG00000004988 615 2.415 0.805 - - - - 0.829 0.781 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
97. CU856359.2 CU856359.2 182 2.413 0.768 - - - - 0.750 0.895 - -
98. syt3 ENSDARG00000075830 430 2.41 0.824 - - - - 0.761 0.825 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
99. lgi1a ENSDARG00000020493 1218 2.41 0.708 - - - - 0.766 0.936 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
100. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.406 0.726 - - - - 0.707 0.973 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]

There are 2243 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA