Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nrxn2b

Gene Name Gene ID Reads Annotation
nrxn2b ENSDARG00000063150 343 neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]










Genes with expression patterns similar to nrxn2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrxn2b ENSDARG00000063150 343 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
2. SHANK1 ENSDARG00000060539 102 2.75 0.863 - - - - 0.901 - 0.986 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
3. tmie ENSDARG00000069423 305 2.435 0.725 - - - - 0.776 - 0.934 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
4. syt4 ENSDARG00000036505 421 2.401 0.805 0.722 - - - 0.874 - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
5. SYT2 ENSDARG00000014169 265 2.377 0.740 0.728 - - - 0.909 - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
6. STMN3 ENSDARG00000038465 1009 2.366 0.720 - - - - 0.735 - 0.911 - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
7. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.337 0.700 - - - - 0.791 - 0.846 - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
8. dnm1b ENSDARG00000009281 219 2.307 0.730 - - 0.800 - 0.777 - - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
9. enpp5 ENSDARG00000070625 550 2.292 0.752 0.769 - - - 0.771 - - - ectonucleotide pyrophosphatase/phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-041014-10]
10. phf23b ENSDARG00000036305 1073 2.235 0.701 - - 0.786 - - - 0.748 - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
11. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.9 - - - - - 0.927 - 0.973 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
12. lgi2a ENSDARG00000111069 965 1.834 0.892 - - - - 0.942 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
13. adcyap1a ENSDARG00000004015 67 1.829 0.841 - - - - - - 0.988 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
14. zgc:174877 ENSDARG00000079278 143 1.812 - - - - - 0.829 - 0.983 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
15. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.789 - - - - - 0.924 0.865 - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
16. nadl1.2 695 1.789 0.841 - - - - - - 0.948 - neural adhesion molecule L1.2, transcript variant X1
17. ELFN1 ELFN1 59 1.78 - - - - - 0.935 0.845 - -
18. git2a ENSDARG00000061915 884 1.779 - - - - - 0.826 - 0.953 - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
19. zgc:194665 ENSDARG00000004577 136 1.777 0.870 - - - - 0.907 - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
20. SRPK2 446 1.777 - - - - - 0.827 - 0.950 - SRSF protein kinase 2, transcript variant X4
21. p2rx3b ENSDARG00000029718 105 1.776 - - - - - 0.805 - 0.971 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
22. adora1 adora1 149 1.77 - - - 0.796 - - - 0.974 -
23. map1aa ENSDARG00000059601 599 1.758 0.818 - - - - 0.940 - - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
24. scn2b ENSDARG00000101713 796 1.754 0.839 - - - - 0.915 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
25. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.751 0.841 - - - - 0.910 - - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
26. her8.2 ENSDARG00000069675 315 1.746 0.881 - - - - 0.865 - - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
27. znf804a ENSDARG00000027079 121 1.741 0.881 - - - - 0.860 - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
28. nefmb ENSDARG00000043697 2052 1.736 0.813 - - - - 0.923 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
29. si:dkey-17e6.2 si:dkey-17e6.2 72 1.731 0.740 - - - - - - 0.991 -
30. CAMKK2 CAMKK2 184 1.73 - - - 0.839 - 0.891 - - -
31. inab ENSDARG00000053248 3239 1.729 0.862 - - - - 0.867 - - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
32. atp1a3a ENSDARG00000018259 5393 1.729 0.828 - - - - 0.901 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
33. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.724 0.865 - - - - 0.859 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
34. grin1a ENSDARG00000027828 1327 1.723 - - - - - 0.912 - 0.811 - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
35. TUBB8P7 TUBB8P7 1353 1.72 0.849 - - - - 0.871 - - -
36. nacad ENSDARG00000012347 1268 1.714 0.803 - - - - 0.911 - - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
37. TTF1_4 TTF1_4 504 1.706 - - - - - - 0.720 0.986 -
38. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.702 - 0.721 - - - - - 0.981 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
39. ptpdc1 ptpdc1 281 1.701 - - - - - - 0.746 0.955 -
40. evx2 ENSDARG00000059255 317 1.697 0.847 - - - - 0.850 - - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
41. NEFH NEFH 101 1.694 0.861 - - - - 0.833 - - -
42. BX957322.2 ENSDARG00000095302 68 1.693 0.847 - - - - - 0.846 - -
43. SKOR2 SKOR2 1041 1.693 0.875 - - - - 0.818 - - -
44. NPTXR NPTXR 241 1.689 - 0.775 - - - 0.914 - - -
45. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.688 - - - - - - 0.732 0.956 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
46. BX640537.1 ENSDARG00000099408 192 1.686 - - - 0.848 - - 0.838 - -
47. ppp2r2c ppp2r2c 441 1.686 0.850 - - - - 0.836 - - -
48. CR407704.1 CR407704.1 188 1.685 0.827 - - - - 0.858 - - -
49. vamp2 ENSDARG00000056877 2158 1.684 0.756 - - - - 0.928 - - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
50. tmem161b ENSDARG00000055989 680 1.683 - - - 0.726 - - - 0.957 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
51. dtnbp1b ENSDARG00000055206 64 1.681 0.730 - - - - 0.951 - - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
52. zgc:100906 ENSDARG00000033599 344 1.678 - 0.772 - - - 0.906 - - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
53. SPOCK1 ENSDARG00000074644 794 1.676 0.767 - - - - 0.909 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
54. shank2 ENSDARG00000062325 66 1.675 0.740 - - - - 0.935 - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
55. si:dkey-228i19.32 si:dkey-228i19.32 9 1.675 0.740 - - - - 0.935 - - -
56. parpbp ENSDARG00000029944 316 1.674 0.852 - - - - 0.822 - - - PARP1 binding protein [Source:ZFIN;Acc:ZDB-GENE-060421-5714]
57. zic6 ENSDARG00000071496 402 1.673 0.749 - - - - 0.924 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
58. gabrg2 ENSDARG00000053665 434 1.668 0.821 - - - - 0.847 - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
59. APBB3 ENSDARG00000053771 654 1.666 0.755 - - - - 0.911 - - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
60. gpr173 ENSDARG00000042922 238 1.665 0.796 - - - - 0.869 - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
61. 5S_rRNA_7 5S_rRNA_7 55 1.663 - 0.728 - - - 0.935 - - -
62. sypb ENSDARG00000002230 262 1.663 0.801 - - - - 0.862 - - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
63. TUBB8P7_2 TUBB8P7_2 565 1.663 0.742 - - - - 0.921 - - -
64. BSN BSN 463 1.661 0.813 - - - - 0.848 - - -
65. CRIP2 ENSDARG00000070670 323 1.66 0.785 - - - - 0.875 - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
66. NPBWR2 NPBWR2 132 1.659 0.740 - - - - 0.919 - - -
67. si:dkey-287i17.3 si:dkey-287i17.3 228 1.659 - 0.819 - 0.840 - - - - -
68. lhx1a ENSDARG00000014018 958 1.655 0.744 - - - - 0.911 - - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
69. map7d2a ENSDARG00000068480 513 1.654 0.858 - - - - 0.796 - - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
70. BX000430.1 ENSDARG00000112057 135 1.651 - - - - - 0.890 - 0.761 - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
71. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.651 - - - 0.793 - 0.858 - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
72. PRRT2 ENSDARG00000103588 913 1.648 0.781 - - - - 0.867 - - - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
73. si:dkey-40c11.2 ENSDARG00000032482 228 1.647 - 0.946 - - - - 0.701 - - si:dkey-40c11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-300]
74. CASS4 ENSDARG00000006775 760 1.646 - 0.833 - 0.813 - - - - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
75. stx1b ENSDARG00000000503 2724 1.645 0.811 - - - - 0.834 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
76. zgc:110191 zgc:110191 359 1.644 - - - 0.798 - - 0.846 - -
77. ANK1_1 ANK1_1 507 1.644 - - - - - 0.821 - 0.823 -
78. calb1 ENSDARG00000031598 252 1.642 0.905 - - - - 0.737 - - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
79. syngr3a ENSDARG00000014871 405 1.642 0.715 - - - - 0.927 - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
80. pcloa ENSDARG00000063299 353 1.641 0.850 - - - - 0.791 - - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
81. DNAJC16 ENSDARG00000059699 507 1.635 - 0.817 - 0.818 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
82. AL935029.1 AL935029.1 514 1.632 - 0.810 - - - 0.822 - - -
83. tmem59l ENSDARG00000003655 1536 1.631 0.755 - - - - 0.876 - - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
84. gsx1 ENSDARG00000035735 1243 1.631 0.718 - - - - 0.913 - - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
85. rheb ENSDARG00000090213 1432 1.629 0.701 - - - - 0.928 - - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
86. scn8aa ENSDARG00000005775 792 1.627 0.809 - - - - 0.818 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
87. NPAS3 ENSDARG00000109820 362 1.627 - - - - - 0.826 0.801 - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
88. rbfox3 rbfox3 1443 1.626 0.761 - - - - 0.865 - - -
89. rhbdd2 ENSDARG00000092463 937 1.626 0.714 - - - - - - 0.912 - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
90. kcnd1 ENSDARG00000074746 153 1.625 0.735 - - - - 0.890 - - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
91. stmn2b ENSDARG00000070537 1586 1.625 0.876 - - - - 0.749 - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
92. CABZ01111990.1 CABZ01111990.1 4374 1.624 0.787 - - - - 0.837 - - -
93. elavl4 ENSDARG00000045639 998 1.623 0.704 - - - - 0.919 - - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
94. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 1.622 - - - 0.821 - - 0.801 - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
95. csmd2 ENSDARG00000001559 203 1.621 - - - - - 0.824 0.797 - - CUB and Sushi multiple domains 2 [Source:ZFIN;Acc:ZDB-GENE-030616-39]
96. TUBB8P7_1 TUBB8P7_1 2722 1.621 0.823 - - - - 0.798 - - -
97. GPRIN3 GPRIN3 169 1.621 0.705 - - - - 0.916 - - -
98. PARP6 PARP6 119 1.613 0.874 - - - - 0.739 - - -
99. dbx2 2971 1.611 0.708 - - - - 0.903 - - - developing brain homeobox 2
100. tubgcp5 ENSDARG00000077442 507 1.611 - - - - - - 0.767 0.844 - tubulin, gamma complex associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-050522-344]

There are 1929 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA