Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nrxn1b

Gene Name Gene ID Reads Annotation
nrxn1b ENSDARG00000063635, ENSDARG00000111881 102 neurexin 1b [Source:ZFIN;Acc:ZDB-GENE-070206-3]










Genes with expression patterns similar to nrxn1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrxn1b ENSDARG00000063635, ENSDARG00000111881 102 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neurexin 1b [Source:ZFIN;Acc:ZDB-GENE-070206-3]
2. cnot10 ENSDARG00000058528 478 1.846 - 0.929 - - - 0.917 - - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
3. CNTNAP2A ENSDARG00000058969 97 1.751 - 0.871 - - - 0.880 - - - contactin associated protein like 2a [Source:ZFIN;Acc:ZDB-GENE-120328-3]
4. c1qtnf5 ENSDARG00000056134 729 1.713 - 0.847 - - - 0.866 - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
5. gdap1 ENSDARG00000058601 89 1.675 - 0.776 - - - 0.899 - - - ganglioside induced differentiation associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-424]
6. rad51b ENSDARG00000037046 137 1.668 - 0.823 - - - 0.845 - - - RAD51 paralog B [Source:ZFIN;Acc:ZDB-GENE-040426-2750]
7. lipeb ENSDARG00000101145 184 1.668 - 0.826 - - - 0.842 - - - lipase, hormone-sensitive b [Source:ZFIN;Acc:ZDB-GENE-100921-71]
8. cntn3a.1 ENSDARG00000062880 156 1.652 - 0.909 - - - 0.743 - - - contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]
9. MPZL2 MPZL2 31 1.634 - - - - - 0.839 0.795 - -
10. PRR5 PRR5 630 1.624 - 0.865 - - - 0.759 - - -
11. C3H7orf55 C3H7orf55 359 1.619 - 0.781 - - - 0.838 - - -
12. znf438 ENSDARG00000061311 524 1.615 - 0.896 - - - 0.719 - - - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
13. kcnk13a ENSDARG00000008212 136 1.611 - - - - - 0.866 0.745 - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
14. dhx57 ENSDARG00000057660 390 1.594 - - - - - 0.816 0.778 - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:ZFIN;Acc:ZDB-GENE-030131-4078]
15. slc30a4 ENSDARG00000007180 158 1.576 - - - - - 0.816 0.760 - - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
16. ACOT12 ENSDARG00000054534 61 1.568 - 0.853 - - - 0.715 - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
17. smarcad1 smarcad1 1457 1.564 - 0.811 - - - 0.753 - - -
18. si:dkey-18j14.4 si:dkey-18j14.4 60 1.561 - - - - - 0.829 0.732 - -
19. C8H9orf3 C8H9orf3 414 1.544 - 0.786 - - - - 0.758 - -
20. cbx6a ENSDARG00000071051 379 1.541 - 0.835 - - - - 0.706 - - chromobox homolog 6a [Source:ZFIN;Acc:ZDB-GENE-040808-26]
21. si:dkey-15h8.15 ENSDARG00000102601 335 1.538 - - - - - 0.733 0.805 - - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
22. nxnl2 ENSDARG00000003934 386 1.494 - 0.749 - - - 0.745 - - - nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
23. tnip1 ENSDARG00000015653 94 1.49 - - - - - 0.742 0.748 - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
24. VAV2 ENSDARG00000044718, ENSDARG00000114652 422 1.485 - 0.710 - - - 0.775 - - - vav 2 guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-091204-420]
25. slc17a9b ENSDARG00000011049 231 1.479 - 0.705 - - - - 0.774 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
26. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.457 - 0.727 - - - 0.730 - - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
27. fbxw11a ENSDARG00000104806 1815 1.451 - 0.702 - - - 0.749 - - - F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
28. SLC17A7 SLC17A7 1226 1.439 - 0.707 - - - - 0.732 - -
29. kazald2 ENSDARG00000078518 3062 1.422 - 0.716 - - - 0.706 - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
30. si:dkey-97l20.2 si:dkey-97l20.2 167 1.406 - 0.704 - - - - 0.702 - -
31. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 0.982 - 0.982 - - - - - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
32. BX005069.4 BX005069.4 61 0.981 - 0.981 - - - - - - -
33. sall3a ENSDARG00000079613 257 0.973 - 0.973 - - - - - - - spalt-like transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-020228-4]
34. bmp8a ENSDARG00000035677 40 0.972 - 0.972 - - - - - - - bone morphogenetic protein 8a [Source:ZFIN;Acc:ZDB-GENE-030912-13]
35. dcp1a ENSDARG00000100136 714 0.971 - 0.971 - - - - - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
36. zmym2 ENSDARG00000027353 96 0.965 - 0.965 - - - - - - - zinc finger, MYM-type 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2408]
37. CAMSAP2 CAMSAP2 109 0.964 - 0.964 - - - - - - -
38. HSPA8 ENSDARG00000068992, ENSDARG00000114726 120 0.962 - 0.962 - - - - - - - heat shock protein 8 [Source:ZFIN;Acc:ZDB-GENE-990415-92]
39. epha6 ENSDARG00000022971 52 0.962 - 0.962 - - - - - - - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
40. si:ch73-96b22.1 si:ch73-96b22.1 393 0.962 - 0.962 - - - - - - -
41. GBE1 GBE1 12 0.962 - 0.962 - - - - - - -
42. mitd1 ENSDARG00000044766 182 0.961 - 0.961 - - - - - - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
43. scrt1a ENSDARG00000100821 2687 0.96 - 0.960 - - - - - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
44. npnt ENSDARG00000018721 19 0.96 - 0.960 - - - - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
45. nt5c1ba ENSDARG00000018153 31 0.96 - 0.960 - - - - - - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
46. cldn19 ENSDARG00000044569 281 0.96 - 0.960 - - - - - - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
47. mmachc ENSDARG00000043877 29 0.96 - 0.960 - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
48. ZNF135 ZNF135 14 0.958 - 0.958 - - - - - - -
49. si:dkeyp-109b10.4 si:dkeyp-109b10.4 23 0.952 - 0.952 - - - - - - -
50. grin2da ENSDARG00000086207 28 0.951 - 0.951 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
51. nadl1.2 695 0.949 - 0.949 - - - - - - - neural adhesion molecule L1.2, transcript variant X1
52. FJX1 ENSDARG00000035873 22 0.949 - 0.949 - - - - - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
53. rem1 ENSDARG00000020544 87 0.949 - 0.949 - - - - - - - RAS (RAD and GEM)-like GTP-binding 1 [Source:ZFIN;Acc:ZDB-GENE-040317-1]
54. scn4ba ENSDARG00000099031 1634 0.949 - 0.949 - - - - - - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
55. si:dkeyp-117h8.4 ENSDARG00000043004 457 0.948 - 0.948 - - - - - - - si:dkeyp-117h8.4 [Source:ZFIN;Acc:ZDB-GENE-030804-4]
56. si:ch211-219a4.3 ENSDARG00000040445 120 0.947 - 0.947 - - - - - - - si:ch211-219a4.3 [Source:ZFIN;Acc:ZDB-GENE-070424-157]
57. pex2 ENSDARG00000062421 83 0.946 - 0.946 - - - - - - - peroxisomal biogenesis factor 2 [Source:ZFIN;Acc:ZDB-GENE-070530-2]
58. tbx6 ENSDARG00000011785 132 0.946 - 0.946 - - - - - - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
59. KIF1A KIF1A 1686 0.946 - 0.946 - - - - - - -
60. tbpl2 ENSDARG00000097302 70 0.945 - 0.945 - - - - - - - TATA box binding protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040520-3]
61. BX897684.1 BX897684.1 636 0.944 - 0.944 - - - - - - -
62. slc7a4 ENSDARG00000068286 1693 0.944 - 0.944 - - - - - - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
63. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 0.944 - 0.944 - - - - - - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
64. AL840631.3 AL840631.3 82 0.941 - 0.941 - - - - - - -
65. efna3b ENSDARG00000098295 319 0.941 - 0.941 - - - - - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
66. mecom ENSDARG00000060808 8 0.94 - 0.940 - - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
67. CABZ01063077.1 CABZ01063077.1 22 0.94 - 0.940 - - - - - - -
68. TNFRSF14_8 TNFRSF14_8 6 0.94 - 0.940 - - - - - - -
69. si:ch211-191a6.3 si:ch211-191a6.3 6 0.94 - 0.940 - - - - - - -
70. si:dkey-17m8.2 ENSDARG00000035797 40 0.94 - 0.940 - - - - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
71. antxr1a ENSDARG00000025672 32 0.94 - 0.940 - - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
72. si:ch211-224l10.4 ENSDARG00000088762 36 0.94 - 0.940 - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
73. slc12a8 ENSDARG00000074384 12 0.94 - 0.940 - - - - - - - solute carrier family 12, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5654]
74. ttc39a ENSDARG00000074126 7 0.94 - 0.940 - - - - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
75. si:dkey-46g23.3 si:dkey-46g23.3 16 0.94 - 0.940 - - - - - - -
76. grtp1b ENSDARG00000030269 24 0.94 - 0.940 - - - - - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
77. TRPC4 TRPC4 18 0.94 - 0.940 - - - - - - -
78. srgap2b srgap2b 80 0.94 - 0.940 - - - - - - -
79. RNF14 ENSDARG00000043905 41 0.94 - 0.940 - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
80. si:dkey-58f10.12 ENSDARG00000092680 258 0.94 - 0.940 - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
81. wfs1b ENSDARG00000074617 69 0.94 - 0.940 - - - - - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
82. CT826375.4 CT826375.4 3 0.94 - 0.940 - - - - - - -
83. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 0.94 - 0.940 - - - - - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
84. asic1b ENSDARG00000101866 61 0.94 - 0.940 - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
85. ARHGAP6 33 0.94 - 0.940 - - - - - - - Rho GTPase activating protein 6
86. lzts2b ENSDARG00000077207 22 0.94 - 0.940 - - - - - - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
87. zgc:153650 zgc:153650 3 0.94 - 0.940 - - - - - - -
88. si:ch211-173m16.1 si:ch211-173m16.1 3 0.94 - 0.940 - - - - - - -
89. nrxn3a ENSDARG00000043746 54 0.94 - 0.940 - - - - - - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
90. CU929356.4 CU929356.4 86 0.94 - 0.940 - - - - - - -
91. C2CD3 ENSDARG00000074137 51 0.94 - 0.940 - - - - - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
92. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.94 - 0.940 - - - - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
93. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.94 - 0.940 - - - - - - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
94. mbnl3 ENSDARG00000016085 6 0.94 - 0.940 - - - - - - - muscleblind-like splicing regulator 3 [Source:ZFIN;Acc:ZDB-GENE-081002-3]
95. si:ch211-253b18.3 si:ch211-253b18.3 4 0.94 - 0.940 - - - - - - -
96. si:dkey-24i24.3 ENSDARG00000088452 27 0.94 - 0.940 - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
97. hoxa13b ENSDARG00000036254 404 0.94 - 0.940 - - - - - - - homeobox A13b [Source:ZFIN;Acc:ZDB-GENE-980526-365]
98. CR812472.2 ENSDARG00000097380 62 0.94 - 0.940 - - - - - - -
99. RPS6KL1 ENSDARG00000079024 22 0.94 - 0.940 - - - - - - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
100. TSPAN17 ENSDARG00000114067 3 0.94 - 0.940 - - - - - - - tetraspanin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-3673]

There are 1034 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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