Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nrp1b

Gene Name Gene ID Reads Annotation
nrp1b ENSDARG00000027290 170 neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]










Genes with expression patterns similar to nrp1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrp1b ENSDARG00000027290 170 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neuropilin 1b [Source:ZFIN;Acc:ZDB-GENE-040611-1]
2. CR407547.1 ENSDARG00000117572 41 2.599 - 0.764 - - - 0.973 0.862 - -
3. CU463790.1 CU463790.1 60 1.77 - 0.797 - - - 0.973 - - -
4. kctd1 ENSDARG00000074056 652 1.75 - - - - - 0.978 0.772 - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
5. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.747 - 0.766 - - - 0.981 - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
6. sox2 ENSDARG00000070913 2763 1.726 - 0.811 - - - 0.915 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
7. mapk8ip2 ENSDARG00000063157 467 1.719 - 0.825 - - - 0.894 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
8. CT955963.1 ENSDARG00000100370 23 1.717 - - - - - 0.982 0.735 - -
9. HPDL ENSDARG00000113721 264 1.714 - - - - - 0.902 0.812 - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
10. glod4 ENSDARG00000042509, ENSDARG00000113811 297 1.713 - - - - - 0.865 0.848 - - glyoxalase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040912-38]
11. CLIP3 ENSDARG00000054456 734 1.684 - 0.779 - - - 0.905 - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
12. CDA 491 1.677 - 0.765 - - - 0.912 - - - cytidine deaminase
13. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.672 - 0.706 - - - 0.966 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
14. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.664 - 0.823 - - - 0.841 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
15. rnd2 ENSDARG00000070735, ENSDARG00000114884 291 1.662 - 0.873 - - - - 0.789 - - Rho family GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-177]
16. fgfrl1b ENSDARG00000052556, ENSDARG00000110034 240 1.655 - - - - - 0.913 0.742 - - fibroblast growth factor receptor like 1b [Source:ZFIN;Acc:ZDB-GENE-050201-3]
17. bach2b ENSDARG00000004074 1079 1.645 - 0.801 - - - 0.844 - - - BTB and CNC homology 1, basic leucine zipper transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-041001-139]
18. thsd7ba ENSDARG00000095022 231 1.644 - 0.792 - - - 0.852 - - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
19. akap6 ENSDARG00000077295 1382 1.644 - 0.709 - - - 0.935 - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
20. hspb11 ENSDARG00000002204 879 1.64 - 0.865 - - - 0.775 - - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
21. B4GALNT1 B4GALNT1 352 1.624 - 0.816 - - - 0.808 - - -
22. ptrfb ptrfb 567 1.608 - 0.777 - - - 0.831 - - -
23. her15.2 her15.2 1701 1.605 - 0.746 - - - 0.859 - - -
24. mapta ENSDARG00000089314 2038 1.602 - 0.730 - - - 0.872 - - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
25. gxylt2 ENSDARG00000044191, ENSDARG00000114372 966 1.6 - 0.725 - - - 0.875 - - - glucoside xylosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070424-64]
26. cacna2d3 ENSDARG00000078760 211 1.589 - 0.857 - - - 0.732 - - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
27. cnrip1a ENSDARG00000091683 1491 1.588 - 0.717 - - - 0.871 - - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
28. bcl9 ENSDARG00000036687 1124 1.574 - 0.869 - - - 0.705 - - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
29. sprb ENSDARG00000058553 1694 1.573 - 0.824 - - - 0.749 - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
30. LSM5 ENSDARG00000071573 371 1.567 - - - - - 0.851 0.716 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
31. CABZ01085858.1 CABZ01085858.1 355 1.566 - 0.770 - - - 0.796 - - -
32. ruvbl1 ENSDARG00000002591 2381 1.564 - 0.767 - - - 0.797 - - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
33. atp1b4 ENSDARG00000053262 1337 1.555 - 0.843 - - - 0.712 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
34. acad8 ENSDARG00000042658, ENSDARG00000116771 259 1.548 - 0.825 - - - 0.723 - - - acyl-CoA dehydrogenase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-040426-828]
35. CABZ01062780.1 CABZ01062780.1 250 1.542 0.736 0.806 - - - - - - -
36. lamb2 ENSDARG00000002084 3265 1.54 0.731 0.809 - - - - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
37. bmpr2a ENSDARG00000011941 2972 1.538 - - - - - 0.760 0.778 - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
38. zgc:66484 ENSDARG00000030478 167 1.524 - 0.756 - - - 0.768 - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
39. coq4 ENSDARG00000104733 402 1.522 - 0.702 - - - 0.820 - - - coenzyme Q4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-218]
40. mapk12b ENSDARG00000006409 2246 1.519 - 0.745 - - - 0.774 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
41. wu:fb17g07 wu:fb17g07 10567 1.508 0.740 0.768 - - - - - - -
42. si:ch73-21g5.7 ENSDARG00000093156 9412 1.506 - 0.737 - - - 0.769 - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
43. CT955984.1 ENSDARG00000113577 1482 1.506 - - - - - 0.756 0.750 - -
44. aqp8b_1 ENSDARG00000089749 586 1.504 - 0.736 - - - - 0.768 - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
45. atp2b3b ENSDARG00000023445 1424 1.503 - 0.792 - - - 0.711 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
46. REXO4 ENSDARG00000088619 655 1.497 0.731 - - - - - 0.766 - - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
47. st18 663 1.494 - 0.774 - - - 0.720 - - - suppression of tumorigenicity 18, zinc finger
48. pex1 ENSDARG00000098904 168 1.487 - 0.761 - - - - 0.726 - - peroxisomal biogenesis factor 1 [Source:ZFIN;Acc:ZDB-GENE-070530-1]
49. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.481 - 0.721 - - - 0.760 - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
50. TUSC5 TUSC5 1436 1.474 - 0.773 - - - 0.701 - - -
51. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.471 - 0.761 - - - 0.710 - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
52. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.455 - - - - - 0.728 0.727 - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
53. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.451 - 0.701 - - - 0.750 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
54. impdh1b ENSDARG00000029524 7472 1.433 0.705 - - - - 0.728 - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
55. si:ch211-214b16.4 ENSDARG00000074345 261 1.431 - 0.714 - - - 0.717 - - - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
56. stmn2a ENSDARG00000033234 2272 1.414 - 0.700 - - - 0.714 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
57. ednrb1a ednrb1a 1255 1.412 - 0.702 - - - - 0.710 - -
58. si:dkey-32m20.1 43 1.41 - 0.702 - - - - 0.708 - - si:dkey-32m20.1
59. BX324198.1 BX324198.1 12 0.991 - - - - - 0.991 - - -
60. hsp70l_1 ENSDARG00000055723 72 0.99 - - - - - 0.990 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
61. pstpip1a ENSDARG00000060860 23 0.988 - - - - - 0.988 - - - proline-serine-threonine phosphatase interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-050419-251]
62. GPC6 GPC6 4 0.988 - - - - - 0.988 - - -
63. slc46a1 ENSDARG00000026149 297 0.988 - - - - - 0.988 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
64. si:rp71-36a1.1 ENSDARG00000095295 13 0.987 - - - - - 0.987 - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
65. si:dkey-22o22.2 ENSDARG00000102445 149 0.987 - - - - - 0.987 - - - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
66. adck1 ENSDARG00000062561 22 0.985 - - - - - 0.985 - - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
67. kitlga ENSDARG00000070917 155 0.984 - - - - - 0.984 - - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
68. slc8a4a ENSDARG00000055154 90 0.984 - - - - - 0.984 - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]
69. retsatl ENSDARG00000034989 41 0.983 - - - - - 0.983 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
70. zgc:73349 zgc:73349 4 0.983 - - - - - 0.983 - - -
71. CABZ01079192.1 ENSDARG00000101629 23 0.983 - - - - - 0.983 - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
72. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 0.983 - - - - - 0.983 - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
73. ADORA1 ADORA1 8 0.983 - - - - - 0.983 - - -
74. irgf1 ENSDARG00000070774 7 0.983 - - - - - 0.983 - - - immunity-related GTPase family, f1 [Source:ZFIN;Acc:ZDB-GENE-051212-5]
75. si:dkey-192k22.2 ENSDARG00000095111 4 0.983 - - - - - 0.983 - - - si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
76. ftr03 8 0.983 - - - - - 0.983 - - - finTRIM family, member 3
77. pdk2 pdk2 32 0.983 - - - - - 0.983 - - -
78. U1_55 U1_55 4 0.983 - - - - - 0.983 - - -
79. sdr42e1 ENSDARG00000098838 25 0.983 - - - - - 0.983 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
80. scpp5 ENSDARG00000078622 15 0.983 - - - - - 0.983 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
81. slc35a5 ENSDARG00000000001 17 0.983 - - - - - 0.983 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
82. PFKFB1 ENSDARG00000037140 5 0.983 - - - - - 0.983 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
83. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 0.983 - - - - - 0.983 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
84. pcdh2g6 9 0.983 - - - - - 0.983 - - - protocadherin 2 gamma 6
85. PLCXD2 ENSDARG00000058200 8 0.983 - - - - - 0.983 - - - phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
86. ATXN1L ENSDARG00000086977 4 0.983 - - - - - 0.983 - - - ataxin 1-like [Source:ZFIN;Acc:ZDB-GENE-090908-1]
87. zgc:154142 ENSDARG00000100792 42 0.983 - - - - - 0.983 - - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
88. CU062667.1 CU062667.1 4 0.983 - - - - - 0.983 - - -
89. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 0.983 - - - - - 0.983 - - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
90. AL953879.1 AL953879.1 5 0.983 - - - - - 0.983 - - -
91. si:ch211-213a13.2 ENSDARG00000074546, ENSDARG00000093024 5 0.983 - - - - - 0.983 - - - si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]
92. CABZ01062083.1 CABZ01062083.1 40 0.983 - - - - - 0.983 - - -
93. C5H3orf30 C5H3orf30 63 0.982 - - - - - 0.982 - - -
94. sgms2 57 0.982 - - - - - 0.982 - - - sphingomyelin synthase 2, transcript variant X1
95. si:ch211-223f7.1 si:ch211-223f7.1 38 0.982 - - - - - 0.982 - - -
96. CABZ01044814.2 CABZ01044814.2 25711 0.982 - - - - - 0.982 - - -
97. CAMK1 CAMK1 28 0.982 - - - - - 0.982 - - -
98. si:dkey-45d16.4 72 0.981 - - - - - 0.981 - - - si:dkey-45d16.4
99. PKN1 PKN1 42 0.981 - - - - - 0.981 - - -
100. msxe msxe 362 0.981 - - - - - 0.981 - - -

There are 1637 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA