Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nrn1b

Gene Name Gene ID Reads Annotation
nrn1b ENSDARG00000042656 44 neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]










Genes with expression patterns similar to nrn1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrn1b ENSDARG00000042656 44 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neuritin 1b [Source:ZFIN;Acc:ZDB-GENE-041010-98]
2. CABZ01062083.1 CABZ01062083.1 40 2.749 - 0.820 - - - 0.983 0.946 - -
3. si:dkey-256h2.1 ENSDARG00000021849 38 2.656 - 0.948 - - - 0.961 0.747 - - si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
4. CCDC142 ENSDARG00000101377 161 1.916 - 0.964 - - - 0.952 - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
5. saga ENSDARG00000012610 63 1.89 1.000 0.890 - - - - - - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
6. mipep ENSDARG00000055344 63 1.871 - 0.925 - - - 0.946 - - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
7. cmklr1 ENSDARG00000090890 37 1.831 1.000 - - - - - 0.831 - - chemokine-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-060526-126]
8. FIBCD1 ENSDARG00000074640 56 1.807 0.853 - - - - 0.954 - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
9. NINJ1 ENSDARG00000103663 43 1.792 - - - - - - 1.000 - 0.792 ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
10. pglyrp5 ENSDARG00000068382, ENSDARG00000112609 120 1.771 - 0.788 - - - 0.983 - - - peptidoglycan recognition protein 5 [Source:ZFIN;Acc:ZDB-GENE-050419-71]
11. nudt4a ENSDARG00000057767, ENSDARG00000110626 106 1.77 0.876 - - - - 0.894 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4a [Source:ZFIN;Acc:ZDB-GENE-031010-33]
12. si:dkey-204h11.12 si:dkey-204h11.12 3 1.76 - 0.948 - - - - - - 0.812
13. rad21b ENSDARG00000035655 87 1.754 - 0.820 - - - 0.934 - - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
14. si:dkey-231k6.4 si:dkey-231k6.4 72 1.748 - 0.811 - - - 0.937 - - -
15. ctrl ENSDARG00000068680 18 1.746 0.796 - - - - 0.950 - - - chymotrypsin-like [Source:ZFIN;Acc:ZDB-GENE-040912-147]
16. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1.744 0.796 0.948 - - - - - - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
17. CT867948.2 CT867948.2 131 1.738 - 0.842 - - - 0.896 - - -
18. AVL9 ENSDARG00000055538 329 1.725 - 0.740 - - - 0.985 - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
19. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 1.72 - 0.906 - - - 0.814 - - - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
20. C9H2orf69 C9H2orf69 148 1.709 - 0.781 - - - 0.928 - - -
21. si:ch211-240g9.1 36 1.706 - - - - - 0.988 0.718 - - si:ch211-240g9.1
22. arf3a ENSDARG00000070539 29 1.705 - - - - - 0.987 0.718 - - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
23. wars2 ENSDARG00000011801 134 1.701 - 0.723 - - - 0.978 - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
24. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1.7 - - - - - 0.982 0.718 - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
25. st6galnac5a ENSDARG00000039220 76 1.699 - 0.803 - - - 0.896 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
26. CLDN20 26 1.699 - - - - - 0.981 0.718 - - claudin 20, transcript variant X2
27. zdhhc12b ENSDARG00000052787 43 1.691 - - - - - 0.973 0.718 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
28. gpr155b ENSDARG00000071086 54 1.686 - - - - 0.722 0.964 - - - G protein-coupled receptor 155b [Source:ZFIN;Acc:ZDB-GENE-110815-2]
29. mcph1 ENSDARG00000058372 51 1.677 - - - - - 0.959 0.718 - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
30. zgc:173702_1 ENSDARG00000110229 24 1.674 - - 0.956 - - - 0.718 - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
31. itfg2 ENSDARG00000002174 114 1.667 - 0.702 - - - 0.965 - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
32. znf536 ENSDARG00000103648 6 1.666 - 0.948 - - - - 0.718 - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
33. dzank1 ENSDARG00000055787, ENSDARG00000111473 26 1.661 - - 0.944 - - - 0.717 - - double zinc ribbon and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-051113-296]
34. trhr2 ENSDARG00000093901, ENSDARG00000114177 67 1.655 - - - - - 0.937 0.718 - - thyrotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050419-193]
35. si:dkey-57h18.2 33 1.652 - 0.798 - - - - 0.854 - - si:dkey-57h18.2, transcript variant X1
36. kiaa1549la ENSDARG00000062477 143 1.645 0.939 - - - - 0.706 - - - KIAA1549-like a [Source:ZFIN;Acc:ZDB-GENE-061207-55]
37. unc119a ENSDARG00000034453 244 1.642 - 0.747 - - - 0.895 - - - unc-119 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090930-2]
38. CABZ01061146.1 CABZ01061146.1 28 1.642 - - 0.791 - - 0.851 - - -
39. CABZ01016567.1 CABZ01016567.1 73 1.636 - - - - 0.747 0.889 - - -
40. si:dkey-78i1.2 si:dkey-78i1.2 15 1.636 0.796 - 0.840 - - - - - -
41. BX470131.1 BX470131.1 86 1.631 - - - - 0.701 0.930 - - -
42. CR847906.1 ENSDARG00000099493 88 1.631 0.796 - - - - 0.835 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
43. si:dkey-10f21.16 si:dkey-10f21.16 252 1.625 - - - - - 0.907 0.718 - -
44. tnrc5 412 1.617 - - - - - 0.839 0.778 - - trinucleotide repeat containing 5
45. pknox1.1_1 ENSDARG00000018765 203 1.614 - 0.728 - - - 0.886 - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
46. PEG3_35 PEG3_35 52 1.608 - 0.890 - - - - 0.718 - -
47. irx5a ENSDARG00000034043 1694 1.608 - 0.898 - - - 0.710 - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
48. C25H19orf40 C25H19orf40 17 1.596 0.796 - - - - - - - 0.800
49. si:ch73-7i4.2 ENSDARG00000093998 154 1.594 - 0.869 0.725 - - - - - - si:ch73-7i4.2 [Source:ZFIN;Acc:ZDB-GENE-060810-137]
50. rab40b ENSDARG00000042410, ENSDARG00000110455 121 1.584 - 0.787 0.797 - - - - - - RAB40B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-257]
51. ANO7 ANO7 54 1.581 0.796 0.785 - - - - - - -
52. ift57 ENSDARG00000021022 288 1.575 - 0.711 - - - 0.864 - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
53. tmem200a ENSDARG00000031540 52 1.565 - 0.820 - - - 0.745 - - - transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]
54. FP102801.1 FP102801.1 294 1.561 - 0.735 - - - 0.826 - - -
55. SNORD94 SNORD94 57 1.558 - 0.793 - - 0.765 - - - -
56. BX004785.2 ENSDARG00000093487 10 1.551 - - - - 0.833 - 0.718 - -
57. ust ENSDARG00000006044 322 1.548 0.791 - - - - 0.757 - - - uronyl-2-sulfotransferase [Source:ZFIN;Acc:ZDB-GENE-041001-163]
58. appa ENSDARG00000104279 4 1.543 - - - - 0.835 - - 0.708 - amyloid beta (A4) precursor protein a [Source:ZFIN;Acc:ZDB-GENE-000616-13]
59. ITPA ENSDARG00000057529 493 1.541 - 0.814 - - - 0.727 - - - inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
60. si:dkey-202n8.1 si:dkey-202n8.1 35 1.54 0.736 0.804 - - - - - - -
61. FP016199.1 FP016199.1 43 1.529 0.811 - - - - - 0.718 - -
62. VSTM2B VSTM2B 149 1.518 - - 0.711 - - 0.807 - - -
63. irak1bp1 ENSDARG00000036903, ENSDARG00000110205 426 1.517 - 0.796 - - - - 0.721 - - interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-272]
64. BX897671.1 BX897671.1 10 1.514 0.796 - - - - - 0.718 - -
65. si:ch211-133l5.8 ENSDARG00000027676 23 1.514 0.796 - - - - - 0.718 - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
66. zgc:66484 ENSDARG00000030478 167 1.511 - 0.705 - - - 0.806 - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
67. CU467824.1 CU467824.1 76 1.509 - 0.769 0.740 - - - - - -
68. SIMC1 SIMC1 103 1.506 - 0.788 - - - - 0.718 - -
69. lrp1bb ENSDARG00000061517 172 1.476 - 0.744 - - - - 0.732 - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
70. fhit_1 ENSDARG00000078195 91 1.441 0.723 - - - - - 0.718 - - fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
71. znf423 ENSDARG00000095732 13 1.436 - - 0.718 - - - 0.718 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
72. PEG3_15 PEG3_15 113 1 1.000 - - - - - - - -
73. eng2a eng2a 186 1 - - - - - - 1.000 - -
74. cog1 ENSDARG00000105131 35 1 - - - - - - 1.000 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
75. efr3ba ENSDARG00000033516 19 1 - - - - - - 1.000 - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
76. DYNLRB2 DYNLRB2 12 1 1.000 - - - - - - - -
77. itga9 ENSDARG00000032435 35 1 - - - - - - 1.000 - - integrin, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1129]
78. PGBD1 PGBD1 61 1 1.000 - - - - - - - -
79. vrk2 ENSDARG00000021547 45 1 1.000 - - - - - - - - vaccinia related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1046]
80. PARP9 ENSDARG00000006848 34 1 - - - - - - 1.000 - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
81. dnali1 ENSDARG00000069815 10 1 - - - - - - 1.000 - - dynein, axonemal, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-080204-7]
82. zgc:171501 ENSDARG00000075375 11 1 - - - - - - 1.000 - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
83. CABZ01032454.1 CABZ01032454.1 7 1 1.000 - - - - - - - -
84. CU633991.1 CU633991.1 16 1 1.000 - - - - - - - -
85. eno1b ENSDARG00000013750 63 1 1.000 - - - - - - - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
86. rem2 ENSDARG00000074064, ENSDARG00000109687 219 1 1.000 - - - - - - - - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
87. pnrc1 ENSDARG00000043904 74 1 1.000 - - - - - - - - proline-rich nuclear receptor coactivator 1 [Source:ZFIN;Acc:ZDB-GENE-040724-189]
88. mms19 ENSDARG00000079067 65 1 - - - - - - 1.000 - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
89. si:ch211-259i2.2 si:ch211-259i2.2 45 1 1.000 - - - - - - - -
90. DNAH10 ENSDARG00000061486 29 1 1.000 - - - - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
91. mcm5_2 ENSDARG00000019507 66 1 1.000 - - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
92. yod1 ENSDARG00000008542 56 1 - - - - - - 1.000 - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
93. C20H2orf44 C20H2orf44 486 1 1.000 - - - - - - - -
94. BEND2_1 BEND2_1 45 1 - - - - - - 1.000 - -
95. ldhbb ENSDARG00000071076 31 1 1.000 - - - - - - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
96. FKBPL ENSDARG00000095322 82 1 - - - - - - 1.000 - - FK506 binding protein like [Source:ZFIN;Acc:ZDB-GENE-030131-4744]
97. atat1 ENSDARG00000004472 700 0.998 - - - - - 0.998 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
98. grik4 ENSDARG00000026753 22 0.993 - - - - - 0.993 - - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
99. CR762436.4 CR762436.4 267 0.992 - - - - - 0.992 - - -
100. ric8a ENSDARG00000007247 229 0.992 - - - - - 0.992 - - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]

There are 1925 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA