Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nrn1a

Gene Name Gene ID Reads Annotation
nrn1a ENSDARG00000071860 1311 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]










Genes with expression patterns similar to nrn1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrn1a ENSDARG00000071860 1311 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
2. plp1a ENSDARG00000103732 3544 4.237 0.755 - - - - 0.935 0.969 0.772 0.806 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
3. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 4.138 - 0.749 - - 0.757 0.862 0.951 - 0.819 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
4. stmn1b ENSDARG00000033655 9491 3.702 0.852 - - - - 0.964 0.965 - 0.921 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
5. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.61 0.920 0.786 - - - 0.968 0.936 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
6. lhx5 ENSDARG00000057936 785 3.607 0.881 - - - - 0.965 0.885 - 0.876 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
7. slc1a3a ENSDARG00000104431 9888 3.575 0.886 0.786 - - - 0.958 0.945 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
8. st8sia2 ENSDARG00000018788 2183 3.567 - - - - 0.869 0.904 0.940 - 0.854 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
9. AKT3 AKT3 1729 3.566 - - - - - 0.951 0.899 0.814 0.902
10. syt11a ENSDARG00000057913 1145 3.536 0.837 0.748 - - - 0.991 0.960 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
11. stmn2a ENSDARG00000033234 2272 3.523 0.927 - - - - 0.977 0.880 - 0.739 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
12. gap43 ENSDARG00000099744 4114 3.503 0.905 0.726 - - - 0.960 0.912 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
13. TUSC5 TUSC5 1436 3.502 0.891 0.801 - - - 0.960 0.850 - -
14. zic4 ENSDARG00000031307 1228 3.5 0.834 0.873 - - - 0.979 0.814 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
15. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.493 0.757 - - - 0.908 0.932 0.896 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
16. mdkb ENSDARG00000020708 5393 3.484 0.919 - - - - 0.969 0.783 - 0.813 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
17. rusc1 ENSDARG00000078125 617 3.474 0.905 - - - - 0.831 0.953 - 0.785 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
18. scn8aa ENSDARG00000005775 792 3.466 0.908 0.747 - - - 0.925 0.886 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
19. necap1 ENSDARG00000020798 612 3.459 0.727 - - - - 0.910 0.946 0.876 - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
20. gng3 ENSDARG00000009553 2530 3.456 0.825 0.758 - - 0.956 - 0.917 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
21. cadm3 ENSDARG00000057013 1545 3.449 0.883 0.779 - - - 0.966 0.821 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
22. slc18a3a ENSDARG00000006356 1285 3.448 - 0.738 - - 0.910 0.840 0.960 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
23. her15.2 her15.2 1701 3.438 - - - - 0.787 0.922 0.943 - 0.786
24. slc1a2b ENSDARG00000102453 3136 3.435 0.880 - - - - 0.922 0.919 - 0.714 solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
25. stx1b ENSDARG00000000503 2724 3.434 0.827 0.782 - - - 0.911 0.914 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
26. gad2 ENSDARG00000015537 724 3.415 - - - - 0.942 0.791 0.858 - 0.824 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
27. pcsk1nl ENSDARG00000076170 1232 3.409 0.764 0.754 - - - 0.958 0.933 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
28. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.392 - - - - - 0.955 0.918 0.739 0.780 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
29. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.39 0.799 0.726 - - - 0.953 0.912 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
30. slc32a1 ENSDARG00000059775 1092 3.388 0.723 - - - - 0.912 0.896 0.857 - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
31. JPH3 ENSDARG00000102204 283 3.379 0.750 - - - 0.947 0.967 0.715 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
32. snap25b ENSDARG00000058117 469 3.358 0.839 - - 0.723 - 0.869 0.927 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
33. dpysl3 ENSDARG00000002587 4381 3.358 0.845 - - - - 0.847 0.904 - 0.762 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
34. st8sia5 ENSDARG00000036584 529 3.35 0.758 - - - - 0.930 0.910 - 0.752 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
35. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 3.35 0.821 0.778 - - - 0.846 0.905 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
36. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 3.349 0.773 0.793 - - - 0.959 0.824 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
37. mapk12b ENSDARG00000006409 2246 3.347 0.707 0.715 - - - 0.955 0.970 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
38. mex3b ENSDARG00000058369 1867 3.34 - - - - - 0.861 0.886 0.725 0.868 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
39. DTX4 ENSDARG00000076302 2642 3.336 - - - - 0.815 0.860 0.953 0.708 - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
40. nadl1.1 1200 3.33 0.781 0.763 - - - 0.840 0.946 - - neural adhesion molecule L1.1, transcript variant X1
41. msi1 ENSDARG00000010710 2634 3.321 - - - - - 0.826 0.895 0.750 0.850 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
42. pou4f2 ENSDARG00000069737 451 3.308 0.812 - - - - 0.879 0.734 - 0.883 POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
43. SNAP91 ENSDARG00000098809 556 3.306 - 0.739 - - - 0.907 0.930 - 0.730 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
44. rbfox3 rbfox3 1443 3.29 0.840 - - - - 0.797 0.917 - 0.736
45. stmn2b ENSDARG00000070537 1586 3.285 0.831 0.705 - - - 0.951 0.798 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
46. npas3b npas3b 1446 3.282 0.711 - - - - 0.814 0.978 - 0.779
47. pax3a ENSDARG00000010192 626 3.266 0.714 0.708 - - - 0.970 0.874 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
48. cd99l2 ENSDARG00000056722 5036 3.255 0.786 - - - - 0.930 0.704 - 0.835 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
49. lgi1a ENSDARG00000020493 1218 3.254 0.762 0.762 - - - 0.800 0.930 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
50. her8a ENSDARG00000016363 996 3.19 0.726 - - - 0.888 0.867 0.709 - - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
51. tmsb ENSDARG00000054911 6411 3.171 0.760 - - - - 0.853 0.835 - 0.723 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
52. hmgb3a ENSDARG00000056725 15668 3.163 0.774 - - - - 0.835 0.842 - 0.712 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
53. gas1b ENSDARG00000067984 1748 3.154 0.806 0.800 - - - 0.709 0.839 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
54. nadl1.2 695 3.149 0.725 - - - - 0.887 0.782 - 0.755 neural adhesion molecule L1.2, transcript variant X1
55. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 3.105 0.852 - 0.738 - - 0.731 - - 0.784 microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
56. tmpob ENSDARG00000022978 8121 3.091 0.754 - - - - 0.780 0.826 - 0.731 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
57. pebp1 ENSDARG00000042069 6651 2.968 0.721 0.740 - - - - 0.735 - 0.772 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
58. ADAM22 ENSDARG00000060532 2259 2.85 - - - - - 0.962 0.978 - 0.910 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
59. atp2b3b ENSDARG00000023445 1424 2.813 0.908 - - - - 0.953 0.952 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
60. si:ch211-278j3.3 ENSDARG00000020284 478 2.788 - - - - 0.952 0.952 0.884 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
61. TUBB8P7_1 TUBB8P7_1 2722 2.751 0.892 - - - - 0.935 0.924 - -
62. eno2 ENSDARG00000014287 2162 2.735 0.799 - - - - 0.954 0.982 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
63. her4.1 ENSDARG00000056732 1264 2.721 - - - - - 0.917 0.952 - 0.852 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
64. myt1b ENSDARG00000102879 5411 2.718 - - - - - 0.917 0.918 - 0.883 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
65. rab3ab ENSDARG00000043835 1267 2.712 0.824 - - - - 0.944 0.944 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
66. nmnat2 ENSDARG00000004580 370 2.711 0.923 - - - - 0.924 0.864 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
67. zic1 ENSDARG00000015567 2520 2.703 0.870 - - - - 0.956 0.877 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
68. mllt11 ENSDARG00000071026 2518 2.697 0.847 - - - - 0.946 0.904 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
69. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.696 0.932 - - - - 0.944 0.820 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
70. snap25a ENSDARG00000020609 4537 2.696 0.876 - - - - 0.935 0.885 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
71. si:ch73-21g5.7 ENSDARG00000093156 9412 2.694 - 0.768 - - - 0.956 0.970 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
72. prrt1 ENSDARG00000062208 368 2.691 0.905 - - - - 0.858 0.928 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
73. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.687 0.830 - - - - 0.975 0.882 - -
74. anxa13l ENSDARG00000013613 631 2.687 0.822 - - - 0.942 0.923 - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
75. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.685 0.872 - - - - 0.912 0.901 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
76. adam23a ENSDARG00000062323 580 2.683 0.857 - - - - 0.879 0.947 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
77. nptx1l ENSDARG00000074671 569 2.682 0.820 - - - - 0.917 0.945 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
78. MAP1A MAP1A 847 2.677 0.892 - - - - 0.949 0.836 - -
79. cers6 ENSDARG00000053583 247 2.677 0.796 - - - - 0.941 0.940 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
80. olfm1b ENSDARG00000014053 1392 2.676 0.812 - - - - 0.938 0.926 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
81. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.673 0.745 - - - - 0.982 0.946 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
82. nova2 ENSDARG00000017673 7685 2.673 - - - - - 0.840 0.973 - 0.860 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
83. sox2 ENSDARG00000070913 2763 2.67 - 0.812 - - - 0.868 0.990 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
84. pou4f1 ENSDARG00000005559 821 2.668 0.927 - - - - 0.814 0.927 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
85. st6gal1 ENSDARG00000044514 142 2.665 0.802 - - - - 0.902 0.961 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
86. spock2 ENSDARG00000075393 791 2.665 0.739 - - - - 0.989 0.937 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
87. C7H4orf48 C7H4orf48 1455 2.664 0.758 - - - - 0.980 0.926 - -
88. adcyap1b ENSDARG00000027740 1539 2.663 0.905 - - - - 0.923 0.835 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
89. ppp3ca ENSDARG00000004988 615 2.662 0.844 - - - - 0.951 0.867 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
90. pcdh1gc5 ENSDARG00000104826 10052 2.66 0.745 - - - - 0.967 0.948 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
91. amph ENSDARG00000007663 599 2.656 0.868 - - - - 0.895 0.893 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
92. atpv0e2 ENSDARG00000059057 585 2.656 0.859 - - - - 0.852 0.945 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
93. tuba1c ENSDARG00000055216 8384 2.648 0.778 - - - - 0.950 0.920 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
94. rtn1b ENSDARG00000021143 1682 2.645 0.820 - - - - 0.943 0.882 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
95. ncana 1537 2.645 - 0.766 - - - 0.963 0.916 - - neurocan a
96. sncgb ENSDARG00000109715 1014 2.64 0.814 - - - - 0.974 0.852 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
97. INA INA 950 2.638 0.918 - - - - 0.883 0.837 - -
98. PPFIA3 ENSDARG00000077053 310 2.621 0.820 - - - - 0.823 0.978 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
99. TUBB2A TUBB2A 142 2.617 0.897 - - - - 0.959 0.761 - -
100. gabra5 ENSDARG00000070730 156 2.615 0.779 - - - - 0.864 0.972 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]

There are 2915 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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