Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nrm

Gene Name Gene ID Reads Annotation
nrm ENSDARG00000063690 1371 nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]










Genes with expression patterns similar to nrm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrm ENSDARG00000063690 1371 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
2. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 2.4 - 0.741 - - - 0.928 0.731 - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
3. rac2 ENSDARG00000038010 5837 2.333 - 0.796 - - - 0.834 0.703 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
4. pvrl1b 1645 2.295 - 0.724 - - - 0.852 - - 0.719 poliovirus receptor-related 1b
5. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 2.28 - 0.741 - - - 0.797 0.742 - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
6. nedd8 ENSDARG00000007989 3896 2.178 - 0.714 - - - 0.758 0.706 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
7. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.812 - - - - - 0.946 0.866 - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
8. crybb3 ENSDARG00000041301 48 1.783 0.843 - - - - 0.940 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
9. dhrs13a.2 ENSDARG00000111240 491 1.771 - - - - - 0.959 - - 0.812 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
10. sptssa ENSDARG00000071203 2306 1.766 - - - - - 0.933 0.833 - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
11. nod2 ENSDARG00000010756 294 1.766 - - - - - 0.946 - - 0.820 nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
12. lpcat3 ENSDARG00000075178, ENSDARG00000109670 2713 1.765 - 0.882 - - - - 0.883 - - lysophosphatidylcholine acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041111-232]
13. pef1 ENSDARG00000023989 3013 1.743 - - - - - 0.954 0.789 - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
14. pex13 ENSDARG00000071037 738 1.739 - - - - - 0.924 - - 0.815 peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
15. gtf2f2a ENSDARG00000069910 1027 1.723 - 0.781 - - - 0.942 - - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
16. si:dkey-27i16.3 si:dkey-27i16.3 494 1.705 - 0.743 - - - 0.962 - - -
17. ngly1 ENSDARG00000003205 733 1.699 - - - - - 0.948 - - 0.751 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
18. cldnb ENSDARG00000009544 6036 1.689 - - - - - 0.958 0.731 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
19. ppl ENSDARG00000101043 9196 1.682 - - - - - 0.894 0.788 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
20. PHTF1 PHTF1 1029 1.68 - - - - - 0.888 0.792 - -
21. gpr143 ENSDARG00000034572 559 1.674 - - - - - 0.901 - - 0.773 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
22. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 1.673 - 0.729 - - - 0.944 - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
23. kmt2e ENSDARG00000007523 1851 1.671 - 0.758 - - - 0.913 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
24. CABZ01084815.1 CABZ01084815.1 351 1.669 0.746 - - - - 0.923 - - -
25. cdkn2c ENSDARG00000057610 179 1.669 - 0.760 - - - 0.909 - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
26. si:ch211-86h15.1 ENSDARG00000074098 354 1.666 0.752 - - - - 0.914 - - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
27. taz ENSDARG00000041421 985 1.661 - - - - - 0.838 - - 0.823 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
28. bcar1 ENSDARG00000056525 6563 1.661 - - - - - 0.919 0.742 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
29. ik ENSDARG00000004161 3132 1.659 - - - - - 0.924 - - 0.735 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
30. SEC24B ENSDARG00000071906 1018 1.659 - - - - - 0.868 0.791 - - SEC24 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6565]
31. mgst1 mgst1 2820 1.655 - - - - - 0.936 0.719 - -
32. elovl6l ENSDARG00000038639 1184 1.654 - - - - - 0.929 0.725 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
33. wdfy4 ENSDARG00000077009 802 1.651 - - - - - 0.801 0.850 - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
34. gmppab ENSDARG00000023498 1272 1.651 - - - - - 0.857 0.794 - - GDP-mannose pyrophosphorylase Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1550]
35. rwdd ENSDARG00000068256 964 1.651 - - - - - 0.943 - - 0.708 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
36. irs1 ENSDARG00000054087 1809 1.647 - 0.840 - - - - 0.807 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
37. ugt5b2 ENSDARG00000101495 512 1.645 - 0.830 - - - - 0.815 - - UDP glucuronosyltransferase 5 family, polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-100406-4]
38. rbm34 ENSDARG00000101877 1573 1.643 - - - - - 0.891 - - 0.752 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
39. TRIP10 TRIP10 1079 1.638 - - - - - 0.861 - - 0.777
40. GPR31 431 1.616 - - - - - 0.860 0.756 - - G protein-coupled receptor 31
41. ndufaf3 ENSDARG00000112931 743 1.615 0.870 0.745 - - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-282]
42. brd1b ENSDARG00000051798 1712 1.608 - 0.750 - - - 0.858 - - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
43. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.598 - 0.786 - - - - 0.812 - - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
44. RFFL_1 RFFL_1 157 1.598 0.824 - - - - - - - 0.774
45. epcam ENSDARG00000040534, ENSDARG00000110073 3322 1.597 - 0.771 - - - - 0.826 - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
46. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.596 0.870 0.726 - - - - - - - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
47. nrip1b ENSDARG00000068894 2699 1.596 - - - - - 0.854 0.742 - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
48. tgm1 ENSDARG00000017799 442 1.595 - 0.729 - - - 0.866 - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
49. dazap2 ENSDARG00000007867 1805 1.593 - - - - - - 0.725 - 0.868 DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
50. tjp3 ENSDARG00000002909 1978 1.591 - - - - - 0.819 0.772 - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
51. arhgap5 ENSDARG00000061294 2228 1.586 0.816 - - - - - 0.770 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
52. tom1 ENSDARG00000104581 1457 1.585 - - - - - 0.844 - - 0.741 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
53. gid8b ENSDARG00000037589 2121 1.582 - - - - - 0.804 - - 0.778 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
54. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.579 - - - - - - 0.782 - 0.797 WD repeat domain 44 [Source:NCBI gene;Acc:569045]
55. brd4 ENSDARG00000078904 5367 1.579 - - - - - 0.821 0.758 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
56. mdm4 ENSDARG00000057513 1954 1.575 - 0.777 - - - 0.798 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
57. pop5 ENSDARG00000053452 1347 1.575 - 0.741 - - - 0.834 - - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
58. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.572 - 0.737 - - - 0.835 - - - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
59. samm50l ENSDARG00000039681 2465 1.571 - - - - - 0.759 - - 0.812 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
60. srek1ip1 ENSDARG00000043728 985 1.571 - - - - - 0.853 - - 0.718 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
61. TANC2 TANC2 1104 1.571 0.737 - - - - 0.834 - - -
62. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.568 - - - - - 0.825 - - 0.743 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
63. yipf6 ENSDARG00000054433, ENSDARG00000116553 3052 1.557 - - - - - 0.761 0.796 - - Yip1 domain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-040625-76]
64. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.547 - - - - - 0.812 - - 0.735 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
65. ltc4s ENSDARG00000062598 138 1.543 0.773 - - - - - - - 0.770 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
66. ndst2a ENSDARG00000086269 754 1.543 0.841 0.702 - - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
67. aldh16a1 ENSDARG00000037935 617 1.541 - 0.768 - - - - - - 0.773 aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
68. TAF2 ENSDARG00000102307 1401 1.54 0.789 - - - - - - - 0.751 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
69. agpat2 ENSDARG00000101139 1227 1.539 0.722 - - - - 0.817 - - - 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) [Source:ZFIN;Acc:ZDB-GENE-061103-541]
70. ints8 ENSDARG00000057986 1063 1.526 - 0.756 - - - - - - 0.770 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
71. prkar1aa ENSDARG00000076128 6565 1.524 - - - - - 0.799 0.725 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
72. FOXO6_1 FOXO6_1 73 1.523 0.805 0.718 - - - - - - -
73. OTTDARG00000032278 OTTDARG00000032278 1016 1.521 - 0.765 - - - - 0.756 - -
74. siah1 ENSDARG00000030871 1590 1.521 - 0.805 - - - 0.716 - - - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
75. dvl1b ENSDARG00000055552 146 1.52 0.757 - - - - - - - 0.763 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
76. ezrb ENSDARG00000025091 2861 1.519 - - - - - 0.765 - - 0.754 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
77. adam10a ENSDARG00000053468 9308 1.518 - 0.771 - - - - 0.747 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
78. IL17RD ENSDARG00000098359 2309 1.518 - - - - - 0.800 0.718 - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
79. RAPGEFL1 ENSDARG00000079912 1074 1.518 - - - - - 0.799 0.719 - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
80. TRIM35_10 TRIM35_10 484 1.517 0.794 0.723 - - - - - - -
81. zgc:56493 ENSDARG00000031435 33407 1.516 - - - - - 0.773 0.743 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
82. laptm4a ENSDARG00000006397 1698 1.516 - 0.708 - - - 0.808 - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
83. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.513 - - - - - 0.783 0.730 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
84. aftpha ENSDARG00000069249 867 1.51 - - - - - - 0.760 - 0.750 aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
85. trim16 ENSDARG00000010673 519 1.508 - 0.731 - - - - - - 0.777 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
86. tmtc4 ENSDARG00000020447 873 1.505 - - - - - - 0.720 - 0.785 transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
87. dusp7 ENSDARG00000101413 1307 1.504 - - - - - 0.783 0.721 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
88. smcr7b smcr7b 690 1.503 0.741 - - - - - 0.762 - -
89. piezo1 ENSDARG00000076870 4704 1.5 - 0.713 - - - - 0.787 - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
90. itgb4 ENSDARG00000028507 2568 1.5 - - - - - 0.797 0.703 - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
91. CU861453.1 ENSDARG00000097192 271 1.492 - 0.718 - - - - - - 0.774
92. nufip2 ENSDARG00000069066 3965 1.489 - - - - - 0.745 0.744 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
93. ARID3A ENSDARG00000070843 1613 1.487 - 0.756 - - - - - - 0.731 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
94. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.487 - 0.762 - - - - - - 0.725 glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
95. gpcpd1 ENSDARG00000016011 2563 1.485 - 0.772 - - - 0.713 - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
96. si:ch211-198b3.1 si:ch211-198b3.1 765 1.482 - 0.745 - - - 0.737 - - -
97. stt3b ENSDARG00000001890 1836 1.481 - - - - - 0.762 0.719 - - STT3B, subunit of the oligosaccharyltransferase complex (catalytic) [Source:ZFIN;Acc:ZDB-GENE-030131-2638]
98. naprt1 naprt1 2610 1.477 - - - - - 0.765 - - 0.712
99. tpst1 ENSDARG00000073872 2490 1.469 - - - - - - 0.710 - 0.759 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
100. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.469 - 0.753 - - - - 0.716 - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]

There are 1720 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA