Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nrl

Gene Name Gene ID Reads Annotation
nrl ENSDARG00000100466 41 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]










Genes with expression patterns similar to nrl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrl ENSDARG00000100466 41 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 neural retina leucine zipper [Source:ZFIN;Acc:ZDB-GENE-050729-1]
2. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 4.306 - - 0.860 0.729 0.940 - - 0.855 0.922 lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
3. lim2.4 ENSDARG00000015445 791 3.477 - - 0.886 - 0.847 - - 0.823 0.921 lens intrinsic membrane protein 2.4 [Source:ZFIN;Acc:ZDB-GENE-040718-104]
4. mipa ENSDARG00000037285, ENSDARG00000116133 507 3.476 - - 0.858 - 0.852 - - 0.800 0.966 major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
5. cx44.1 cx44.1 799 3.454 - - 0.796 - 0.871 - - 0.809 0.978
6. cryba2a ENSDARG00000030349 1342 3.445 - - 0.861 - 0.898 - - 0.807 0.879 crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
7. crygm2d10 ENSDARG00000087765 358 3.375 - - 0.861 - 0.834 - - 0.826 0.854 crystallin, gamma M2d10 [Source:ZFIN;Acc:ZDB-GENE-071004-96]
8. crygm2d14 ENSDARG00000087301 66 3.371 - - 0.744 - 0.834 - - 0.858 0.935 crystallin, gamma M2d14 [Source:ZFIN;Acc:ZDB-GENE-070822-20]
9. cryba1l1 ENSDARG00000032929 1868 3.359 - - 0.900 - 0.855 - - 0.700 0.904 crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
10. crygm2d12 ENSDARG00000069801, ENSDARG00000113681 394 3.345 - - 0.868 - 0.746 - - 0.858 0.873 crystallin, gamma M2d12 [Source:ZFIN;Acc:ZDB-GENE-070822-19]
11. cx23 ENSDARG00000054150 115 3.34 - - 0.850 - 0.850 - - 0.741 0.899 connexin 23 [Source:ZFIN;Acc:ZDB-GENE-050320-121]
12. si:ch211-274p24.3 si:ch211-274p24.3 72 3.335 - - 0.728 - 0.909 - - 0.846 0.852
13. lim2.3 ENSDARG00000037402 302 3.332 - - 0.856 - 0.903 - - 0.737 0.836 lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]
14. crygm2d8 ENSDARG00000116164 698 3.287 - - 0.800 - 0.715 - - 0.828 0.944 crystallin, gamma M2d8 [Source:ZFIN;Acc:ZDB-GENE-040718-321]
15. crygm2d4 ENSDARG00000087164, ENSDARG00000115295 138 3.28 - - 0.725 - 0.814 - - 0.823 0.918 crystallin, gamma M2d4 [Source:ZFIN;Acc:ZDB-GENE-060918-3]
16. prox2 ENSDARG00000041952, ENSDARG00000117137 112 3.278 - - 0.858 - 0.784 - - 0.720 0.916 prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
17. cryba2b ENSDARG00000041925 4329 3.232 - - 0.837 0.787 0.812 - - 0.796 - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
18. si:ch211-212n6.16 si:ch211-212n6.16 314 3.23 - - 0.845 - 0.721 - - 0.811 0.853
19. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 3.08 - - 0.775 0.773 0.733 - - - 0.799 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
20. crygmx ENSDARG00000053862 482 2.757 - - 0.909 - 0.885 - - - 0.963 crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
21. cps1 ENSDARG00000020028 67 2.678 - - 0.783 - 0.919 - - - 0.976 carbamoyl-phosphate synthase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-081105-17]
22. si:ch211-145g9.7 32 2.67 - - 0.845 - 0.910 - - - 0.915 si:ch211-145g9.7, transcript variant X1
23. zgc:86723 zgc:86723 299 2.669 - - 0.866 - - - - 0.844 0.959
24. dnase1l3l dnase1l3l 16 2.66 - - 0.867 - - - - 0.851 0.942
25. crygn2 ENSDARG00000030411 2551 2.653 - - 0.878 - 0.838 - - - 0.937 crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
26. crybb1l1 ENSDARG00000007576 1020 2.64 - - 0.845 - 0.861 - - - 0.934 crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
27. crybb1l3 ENSDARG00000007655 33 2.608 - - 0.881 0.803 - - - - 0.924 crystallin, beta B1, like 3 [Source:ZFIN;Acc:ZDB-GENE-070820-11]
28. crygm2d16 ENSDARG00000076790 129 2.599 - - 0.808 - - - - 0.852 0.939 crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
29. cryba1l2 ENSDARG00000014803 47 2.545 - - - - 0.812 - - 0.803 0.930 crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
30. mipb ENSDARG00000013963 753 2.528 - - 0.839 - 0.739 - - - 0.950 major intrinsic protein of lens fiber b [Source:ZFIN;Acc:ZDB-GENE-050706-86]
31. cryba4 ENSDARG00000024548 111 2.518 - - 0.737 - 0.835 - - - 0.946 crystallin, beta A4 [Source:ZFIN;Acc:ZDB-GENE-050522-143]
32. si:ch211-212n6.18 si:ch211-212n6.18 233 2.503 - - - - 0.764 - - 0.792 0.947
33. zgc:165347_1 zgc:165347_1 69 2.497 - - 0.733 - - - - 0.839 0.925
34. crybb1l2 ENSDARG00000016793 723 2.488 - - 0.912 - 0.812 - - - 0.764 crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
35. crygm2d1 ENSDARG00000087324 258 2.464 - - 0.707 - - - - 0.809 0.948 crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
36. crygm2d6 ENSDARG00000073874 38 2.456 - - 0.767 - - - - 0.738 0.951 crystallin, gamma M2d6 [Source:ZFIN;Acc:ZDB-GENE-040625-145]
37. capn3a ENSDARG00000041864 89 2.455 - - 0.754 0.742 - - - - 0.959 calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
38. crygmxl2 ENSDARG00000074001 282 2.444 - - 0.796 - - - - 0.827 0.821 crystallin, gamma MX, like 2 [Source:ZFIN;Acc:ZDB-GENE-050522-401]
39. zgc:165525 zgc:165525 207 2.426 - - 0.796 - 0.769 - - - 0.861
40. cx50.5 cx50.5 15 2.426 - - 0.783 - - - - 0.724 0.919
41. crygm2d13 ENSDARG00000057460 1093 2.409 - - 0.818 - 0.741 - - 0.850 - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
42. pax6l pax6l 54 2.397 - - - 0.759 - - - 0.763 0.875
43. ahr1b ENSDARG00000023537 44 2.358 - - 0.768 - 0.833 - - - 0.757 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
44. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 2.324 - - 0.707 - 0.796 - - - 0.821 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
45. zgc:165347 zgc:165347 1358 2.296 - - 0.842 - 0.747 - - 0.707 -
46. crygm2d5 ENSDARG00000069792 207 2.234 - - 0.808 - - - - 0.711 0.715 crystallin, gamma M2d5 [Source:ZFIN;Acc:ZDB-GENE-060918-4]
47. cnn1a ENSDARG00000017193 6 1.868 1.000 - - - - - - 0.868 - calponin 1, basic, smooth muscle, a [Source:ZFIN;Acc:ZDB-GENE-090312-141]
48. si:ch211-219a15.3 ENSDARG00000087659 12 1.868 1.000 - - - - - - - 0.868 si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
49. cryba1b ENSDARG00000053875 3256 1.844 - - 0.911 - - - - - 0.933 crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
50. zgc:110053 zgc:110053 69 1.839 - - 0.927 - - - - - 0.912
51. cryba1a ENSDARG00000041141 8 1.834 - - 0.867 - - - - - 0.967 crystallin, beta A1a [Source:ZFIN;Acc:ZDB-GENE-040718-107]
52. vsx2 ENSDARG00000005574 102 1.823 1.000 - 0.823 - - - - - - visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
53. crybb1 ENSDARG00000068507 2255 1.809 - - 0.931 - 0.878 - - - - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
54. foxq2 ENSDARG00000071394 3 1.803 - - - - - - - 0.810 0.993 forkhead box Q2 [Source:ZFIN;Acc:ZDB-GENE-050208-663]
55. CCDC74B CCDC74B 8 1.795 1.000 - - 0.795 - - - - -
56. grifin ENSDARG00000033382 141 1.791 - - 0.858 - - - - - 0.933 galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
57. crygmxl1 ENSDARG00000018797 7 1.786 - - - - - - - 0.868 0.918 crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
58. npvf ENSDARG00000036227 23 1.785 - - - - - - - 0.868 0.917 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
59. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.759 - - 0.866 - 0.893 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
60. ggt1a ENSDARG00000023526 26 1.756 - - - - - - - 0.766 0.990 gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
61. zgc:92275 ENSDARG00000034048 9 1.753 1.000 - - - - - - - 0.753 zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
62. crygm2d9 ENSDARG00000115701 28 1.734 - - - - - - - 0.836 0.898 crystallin, gamma M2d9 [Source:ZFIN;Acc:ZDB-GENE-081105-81]
63. wisp1a ENSDARG00000054331 26 1.723 1.000 - - - - - - - 0.723 WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
64. TMEM57 TMEM57 260 1.72 1.000 - - 0.720 - - - - -
65. si:ch211-152c2.3 ENSDARG00000045898 3448 1.709 - - 0.876 - 0.833 - - - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
66. foxl2 61 1.704 1.000 - - 0.704 - - - - - forkhead box L2, transcript variant X1
67. crygm2d15 ENSDARG00000069826 48 1.685 - - - - - - - 0.792 0.893 crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
68. CR381630.1 CR381630.1 23 1.68 - - 0.743 - - - - - 0.937
69. crygm2d3 ENSDARG00000088823 1560 1.677 - - 0.873 - - - - 0.804 - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
70. lim2.5 ENSDARG00000041295 56 1.673 - - - - - - - 0.846 0.827 lens intrinsic membrane protein 2.5 [Source:ZFIN;Acc:ZDB-GENE-050320-94]
71. CU929052.1 CU929052.1 642 1.672 - - 0.872 - 0.800 - - - -
72. CR391967.1 CR391967.1 135 1.664 - - - - - - - 0.852 0.812
73. CCDC88A_1 CCDC88A_1 12 1.646 - - - - - - - 0.813 0.833
74. zgc:162402 zgc:162402 298 1.643 - - - - - - - 0.820 0.823
75. fabp11b ENSDARG00000002311 354 1.641 - - 0.760 - 0.881 - - - - fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
76. pmelb ENSDARG00000033760 206 1.579 - - - - 0.790 - - - 0.789 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
77. lctlb ENSDARG00000016337 35 1.564 - - - - - - - 0.785 0.779 lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
78. foxg1b ENSDARG00000032705 354 1.563 - - - 0.737 - - - - 0.826 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
79. NAGS ENSDARG00000077193 8 1.533 - - 0.726 - - - - - 0.807 N-acetylglutamate synthase [Source:ZFIN;Acc:ZDB-GENE-121219-2]
80. si:dkey-34f9.3 ENSDARG00000077813 3 1.523 - - - - - - - 0.800 0.723 si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
81. B4GALNT4 B4GALNT4 11 1.516 - - - 0.776 0.740 - - - -
82. neurod neurod 1189 1.514 0.789 - - 0.725 - - - - -
83. hes2.2 ENSDARG00000068168 197 1.502 0.749 - - - - - - - 0.753 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
84. rx2 ENSDARG00000040321 112 1.5 - - 0.711 0.789 - - - - - retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
85. efcab4bb efcab4bb 27 1.464 - - 0.715 - 0.749 - - - -
86. pitx3 ENSDARG00000070069 363 1.463 - - - - 0.755 - - - 0.708 paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
87. CABZ01090303.1 CABZ01090303.1 2 1 1.000 - - - - - - - -
88. BRINP3 BRINP3 11 1 1.000 - - - - - - - -
89. WIPI1 ENSDARG00000040657 138 1 1.000 - - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
90. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 1.000 - - - - - - - -
91. apof ENSDARG00000090980 145 1 1.000 - - - - - - - - apolipoprotein F [Source:ZFIN;Acc:ZDB-GENE-031204-36]
92. cnfn ENSDARG00000041115 21 1 1.000 - - - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
93. syt8 syt8 82 1 1.000 - - - - - - - -
94. si:dkey-282h22.5 ENSDARG00000092458 7 1 1.000 - - - - - - - - si:dkey-282h22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-220]
95. tmem179b ENSDARG00000069495 17 1 1.000 - - - - - - - - transmembrane protein 179B [Source:ZFIN;Acc:ZDB-GENE-091204-145]
96. cxxc4 ENSDARG00000077817 197 1 1.000 - - - - - - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
97. grm2a ENSDARG00000004150 64 1 1.000 - - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
98. mcm6l ENSDARG00000033231, ENSDARG00000111624 23 1 1.000 - - - - - - - - MCM6 minichromosome maintenance deficient 6, like [Source:ZFIN;Acc:ZDB-GENE-050913-141]
99. slc25a37 ENSDARG00000073743 31 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial iron transporter), member 37 [Source:ZFIN;Acc:ZDB-GENE-031118-202]
100. cacng8a ENSDARG00000020450 32 1 1.000 - - - - - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]

There are 525 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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