Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nrip1b

Gene Name Gene ID Reads Annotation
nrip1b ENSDARG00000068894 2699 nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]










Genes with expression patterns similar to nrip1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrip1b ENSDARG00000068894 2699 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
2. magt1 ENSDARG00000058062 3903 3.312 0.781 - - - 0.888 0.866 0.777 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
3. tax1bp3 ENSDARG00000059177 4324 2.545 0.794 - - - 0.901 - 0.850 - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
4. SERP1_1 ENSDARG00000076223 6668 2.441 - - - 0.843 0.862 - 0.736 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
5. tmem45b ENSDARG00000056239 2395 2.356 - 0.945 - - - 0.711 0.700 - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
6. ajuba ENSDARG00000077842 1152 2.332 0.748 - - - - 0.834 0.750 - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
7. SH3D21 ENSDARG00000099448 1726 2.311 0.726 - - - - 0.850 0.735 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
8. fkbp3 ENSDARG00000098059 5428 1.827 - 0.943 - - - 0.884 - - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
9. TANC2 TANC2 1104 1.749 - - - - 0.916 0.833 - - -
10. surf4l ENSDARG00000035131 3648 1.728 - - - - 0.890 0.838 - - - surfeit gene 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-172]
11. itgb1b.1 ENSDARG00000053232 4721 1.724 - 0.943 - - - - 0.781 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
12. id3 ENSDARG00000054823 3484 1.719 - 0.938 - - - 0.781 - - - inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
13. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.702 - - - - - 0.959 0.743 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
14. MAPRE2 ENSDARG00000099943 3041 1.688 - - - - 0.906 0.782 - - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
15. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1.678 0.741 - - - 0.937 - - - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
16. safb ENSDARG00000020467 5608 1.66 - - - - 0.853 0.807 - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
17. selk 954 1.658 0.796 - - 0.862 - - - - - selenoprotein K
18. myo1c myo1c 4978 1.653 0.752 0.901 - - - - - - -
19. CACUL1 ENSDARG00000021885 691 1.651 - - - 0.845 - 0.806 - - - CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
20. plp1a ENSDARG00000103732 3544 1.644 - 0.779 - - 0.865 - - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
21. clk2b ENSDARG00000059870 525 1.64 - - - 0.773 - 0.867 - - - CDC-like kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-1126]
22. prdx2 ENSDARG00000025350 11194 1.639 - 0.890 - - 0.749 - - - - peroxiredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-030326-2]
23. c7a ENSDARG00000042172 716 1.637 0.790 - - - - - 0.847 - - complement component 7a [Source:ZFIN;Acc:ZDB-GENE-081104-392]
24. tom1 ENSDARG00000104581 1457 1.629 0.733 - - - - 0.896 - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
25. s100v1 ENSDARG00000070427 6633 1.623 - - - - - 0.866 0.757 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
26. wnt10a ENSDARG00000017155 491 1.618 0.802 - - - - - 0.816 - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
27. slc2a3a ENSDARG00000013295 2449 1.612 - - - - 0.912 - 0.700 - - solute carrier family 2 (facilitated glucose transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-040718-390]
28. wdfy4 ENSDARG00000077009 802 1.609 - - - - - 0.764 0.845 - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
29. eppk1 ENSDARG00000096359 4315 1.606 - - - - - 0.881 0.725 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
30. CARKD 1398 1.605 0.756 - - - - 0.849 - - - carbohydrate kinase domain containing, transcript variant X7
31. tspan18b ENSDARG00000015015 1433 1.603 0.829 - - - - 0.774 - - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
32. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 1.6 - 0.768 - - - 0.832 - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
33. c1galt1c1 ENSDARG00000036335 1623 1.599 - - - - - 0.889 0.710 - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
34. myeov2 3351 1.597 - - - - - 0.882 0.715 - - myeloma overexpressed 2
35. nrm ENSDARG00000063690 1371 1.596 - - - - - 0.854 0.742 - - nurim [Source:ZFIN;Acc:ZDB-GENE-060503-445]
36. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.596 - - - - - 0.847 0.749 - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
37. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.595 - - - - - 0.772 0.823 - - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
38. ccne2 ENSDARG00000098529 4695 1.594 0.711 - - - 0.883 - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
39. zgc:91909 ENSDARG00000021287 1488 1.589 0.751 - - - - 0.838 - - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
40. mir203b 1077 1.589 0.723 - - - - 0.866 - - - microRNA 203b
41. U2_6 U2_6 1155 1.588 - - - - - 0.869 0.719 - -
42. cmasb 499 1.588 - - - - - 0.869 0.719 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
43. rac2 ENSDARG00000038010 5837 1.586 - - - - - 0.850 0.736 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
44. rwdd ENSDARG00000068256 964 1.583 0.746 - - - - 0.837 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
45. wu:fc34e06 1793 1.582 0.778 - - - - 0.804 - - - wu:fc34e06, transcript variant X10
46. atl3 ENSDARG00000004270 2806 1.582 - 0.763 - - - 0.819 - - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
47. s100z ENSDARG00000038729 442 1.581 - - - 0.736 - 0.845 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
48. ATXN7 ENSDARG00000074804 1137 1.58 0.754 - - - 0.826 - - - - ataxin 7 [Source:ZFIN;Acc:ZDB-GENE-110621-1]
49. arf1 ENSDARG00000009484 5034 1.58 - - - - - 0.876 0.704 - - ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]
50. ef1 1343 1.572 0.758 - - - - 0.814 - - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
51. elovl6l ENSDARG00000038639 1184 1.571 - - - - - 0.827 0.744 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
52. cldnb ENSDARG00000009544 6036 1.568 - - - - - 0.865 0.703 - - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
53. GPR31 431 1.565 - - - - - 0.811 0.754 - - G protein-coupled receptor 31
54. PRSS23 ENSDARG00000055786 564 1.564 - - - 0.724 - 0.840 - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
55. CABZ01005777.1 CABZ01005777.1 505 1.563 - - - 0.772 - 0.791 - - -
56. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.563 0.774 - - - - 0.789 - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
57. cylda ENSDARG00000060058 768 1.562 - 0.775 - - - 0.787 - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
58. TSTA3 ENSDARG00000039666 1776 1.56 - - - - - 0.735 0.825 - - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
59. SLC25A24 ENSDARG00000008568 2005 1.56 0.727 - - - - - 0.833 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
60. zgc:92313 ENSDARG00000040513 790 1.559 0.772 - - - - - 0.787 - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
61. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.556 0.790 - - - - - 0.766 - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
62. znf740 znf740 2458 1.553 - 0.778 - - - 0.775 - - -
63. NAALAD2 ENSDARG00000021383 704 1.553 0.766 - - 0.787 - - - - - N-acetylated alpha-linked acidic dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1025]
64. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.551 - - - - - 0.822 0.729 - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
65. map2k1 ENSDARG00000007825 373 1.55 0.752 - - - - - 0.798 - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
66. IL17RD ENSDARG00000098359 2309 1.549 0.730 - - - - 0.819 - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
67. aup1 ENSDARG00000092609 2431 1.548 0.736 - - - - - 0.812 - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
68. klf2a ENSDARG00000042667, ENSDARG00000113441 588 1.545 - - - 0.755 - 0.790 - - - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
69. gdap1l1 ENSDARG00000028628 233 1.54 0.751 - - - - 0.789 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
70. grp ENSDARG00000043074 747 1.537 0.748 - - - - 0.789 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
71. hif1al ENSDARG00000100826 18627 1.533 - 0.714 - - - 0.819 - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
72. ms4a17a.7 ENSDARG00000043796 352 1.533 - 0.781 - - - - 0.752 - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
73. AIM1L AIM1L 899 1.531 - - - - - 0.733 0.798 - -
74. ccng2 ENSDARG00000017602 3141 1.529 0.755 0.774 - - - - - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
75. pdxdc1 ENSDARG00000101886 1958 1.528 - - - - - 0.755 0.773 - - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
76. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.527 0.791 - - 0.736 - - - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
77. fam89a ENSDARG00000079979 4375 1.527 0.752 - - - - - 0.775 - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
78. arpc5b ENSDARG00000019062 2786 1.527 - - - 0.711 - - 0.816 - - actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
79. si:dkey-95p16.2 ENSDARG00000093484 3413 1.524 - - - 0.733 - - 0.791 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
80. gpcpd1 ENSDARG00000016011 2563 1.523 0.767 - - - - 0.756 - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
81. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.52 - - - - - 0.797 0.723 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
82. cldnf ENSDARG00000043133 1006 1.517 0.760 - - - - 0.757 - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
83. gnb4b ENSDARG00000115383 7457 1.512 0.787 - - - - - 0.725 - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
84. txnrd1 11401 1.511 - - - - 0.757 0.754 - - - thioredoxin reductase 1
85. prrx1a ENSDARG00000033971 1786 1.509 - - - - - 0.753 0.756 - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
86. FP102272.1 FP102272.1 9473 1.508 0.749 - - - - 0.759 - - -
87. degs2 ENSDARG00000042544 1912 1.508 - - - - - 0.807 0.701 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
88. soul2 ENSDARG00000039499 1469 1.506 0.743 - - - - 0.763 - - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
89. znf259 znf259 1819 1.504 0.734 0.770 - - - - - - -
90. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.502 0.729 - - - - 0.773 - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
91. abat ENSDARG00000006031 2143 1.501 0.790 - - - - - 0.711 - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
92. ccnk ENSDARG00000034146 1255 1.497 0.740 - - - - 0.757 - - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
93. s100u ENSDARG00000071014 4754 1.496 - 0.740 - - - - 0.756 - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
94. ezrb ENSDARG00000025091 2861 1.495 - - - - - 0.757 0.738 - - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
95. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.493 - 0.753 - - - - 0.740 - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
96. arglu1b ENSDARG00000018319 1110 1.492 0.758 - - 0.734 - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
97. phf14 ENSDARG00000061458 492 1.491 0.728 - - - - 0.763 - - - PHD finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-1796]
98. si:ch211-87l2.1 si:ch211-87l2.1 2403 1.488 - 0.779 - - - - 0.709 - -
99. prickle1a ENSDARG00000040649 700 1.488 0.786 - - 0.702 - - - - - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
100. sult1st4 ENSDARG00000003181 540 1.484 - - - - - 0.710 0.774 - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]

There are 1625 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA