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Results for nrf1

Gene Name Gene ID Reads Annotation
nrf1 ENSDARG00000000018 4683 nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]










Genes with expression patterns similar to nrf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nrf1 ENSDARG00000000018 4683 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
2. GRB10 GRB10 1496 2.757 - 0.816 - - - 0.973 0.968 - -
3. kmt2bb ENSDARG00000060697 5230 2.442 - 0.718 0.737 - - - 0.987 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
4. snrnp70 ENSDARG00000077126 5921 2.438 - 0.731 0.717 - 0.990 - - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
5. eif2s3 ENSDARG00000008292 17051 2.407 - 0.712 - - - 0.920 0.775 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
6. arpc5a ENSDARG00000039142 5482 2.345 - 0.756 - - 0.835 - - 0.754 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
7. ddx5 ENSDARG00000038068 35302 2.271 - - - 0.746 0.702 - 0.823 - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
8. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 1.968 - - - - 0.986 - 0.982 - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
9. CORO1C CORO1C 5554 1.963 - - - - 0.983 - 0.980 - -
10. cplx4b ENSDARG00000059486 3192 1.962 - - - - - 0.976 0.986 - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
11. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.958 - - - - 0.982 0.976 - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
12. ston2 ENSDARG00000057452 2977 1.949 - - - - - 0.970 0.979 - - stonin 2 [Source:ZFIN;Acc:ZDB-GENE-050913-137]
13. lrp1b lrp1b 3216 1.948 - - - - 0.974 - 0.974 - -
14. CWC15 ENSDARG00000013382 8969 1.933 - - - - 0.955 - 0.978 - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
15. itga3b ENSDARG00000012824 1872 1.932 - - - - - 0.976 0.956 - - integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]
16. styk1 1199 1.929 - - - - - 0.963 0.966 - - serine/threonine/tyrosine kinase 1
17. si:ch73-18b11.1 si:ch73-18b11.1 3840 1.881 - - - - 0.899 - 0.982 - -
18. gapdhs ENSDARG00000039914 8760 1.851 - - - - 0.882 - 0.969 - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
19. mbd3a ENSDARG00000061774 4047 1.851 - - - - - - 0.978 0.873 - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
20. APOD APOD 3404 1.842 - - - - - 0.979 0.863 - -
21. stmn1a ENSDARG00000004169 21169 1.841 - - - - 0.872 0.969 - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
22. cstf3 ENSDARG00000018904 6111 1.835 - - - - 0.862 - 0.973 - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
23. gbp ENSDARG00000040059 1939 1.819 - 0.835 - - 0.984 - - - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
24. sh3bgrl3 ENSDARG00000098075 3071 1.81 - - - - - - 0.980 - 0.830 SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
25. btg2 ENSDARG00000020298 6616 1.809 - - - - 0.939 - - - 0.870 B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
26. nup98 ENSDARG00000074955 3998 1.807 - 0.822 - - - - 0.985 - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
27. acsbg2 ENSDARG00000004094 2445 1.803 - 0.835 - - - - 0.968 - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
28. robo3 ENSDARG00000005645 2818 1.8 - - - - - 0.968 - - 0.832 roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
29. csnk1db ENSDARG00000006125 2581 1.799 - - - - - - 0.963 0.836 - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
30. slc38a2 ENSDARG00000045886 2052 1.795 - - - - - - 0.971 - 0.824 solute carrier family 38, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9659]
31. pcyt2 ENSDARG00000043003 3506 1.788 - - - - - - 0.981 0.807 - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
32. dnajc5ab ENSDARG00000004836 2923 1.783 - 0.801 - - - 0.982 - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
33. epc1 epc1 1164 1.779 - - - - - 0.982 - 0.797 -
34. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.778 - 0.790 - - 0.988 - - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
35. meis1 meis1 6937 1.777 - 0.857 - - - 0.920 - - -
36. wu:fk48d07 wu:fk48d07 13245 1.776 - - - - - 0.907 0.869 - -
37. rhoaa ENSDARG00000026845 6900 1.775 - - - - 0.856 - 0.919 - - ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
38. AMPD2 AMPD2 1723 1.775 - - - - 0.987 - - - 0.788
39. hnrnph1l ENSDARG00000005551 8727 1.772 - - - - 0.919 - - - 0.853 heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
40. ralbp1 ENSDARG00000078653 2440 1.762 - 0.775 - - - - 0.987 - - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
41. cacybp ENSDARG00000014731 2650 1.759 - 0.774 - - - 0.985 - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
42. ktn1 ENSDARG00000032802 6251 1.759 - - - - - 0.955 - - 0.804 kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
43. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 1.755 - - - - - - 0.973 - 0.782 integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
44. insm1b ENSDARG00000053301 2032 1.749 - - - 0.773 - - 0.976 - - insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
45. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.743 - - - - 0.985 - - 0.758 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
46. met ENSDARG00000070903 2088 1.74 - - - - - - 0.935 - 0.805 MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
47. rpa2 ENSDARG00000037188 4284 1.738 - - 0.756 - - 0.982 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
48. kif11 ENSDARG00000010948 4973 1.733 - - - - 0.761 - 0.972 - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
49. pdcd10b ENSDARG00000012591 3395 1.731 - - - - - - 0.988 0.743 - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
50. sulf2l sulf2l 4980 1.725 - 0.741 - - - 0.984 - - -
51. ctnnd1 ENSDARG00000078233 2520 1.724 - - - - - - 0.923 - 0.801 catenin (cadherin-associated protein), delta 1 [Source:ZFIN;Acc:ZDB-GENE-110208-9]
52. axin2 ENSDARG00000100149 4223 1.724 - 0.748 - - - 0.976 - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
53. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.723 - 0.734 - - 0.989 - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
54. clica clica 6206 1.722 - - - - - 0.750 0.972 - -
55. LRP10 ENSDARG00000054539 1895 1.722 - - - - - - 0.982 0.740 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
56. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.721 - - - 0.738 - 0.983 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
57. cbx3a ENSDARG00000003860 4922 1.719 - 0.734 - - - 0.985 - - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
58. abl1 ENSDARG00000035187 3553 1.718 - - - - 0.981 - - 0.737 - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
59. C18H12orf23 C18H12orf23 5362 1.717 - 0.746 - - - 0.971 - - -
60. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 1.716 - 0.735 - - 0.981 - - - - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
61. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.715 - - - - - 0.969 - 0.746 - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
62. msi2b ENSDARG00000032614 3095 1.714 - - - - - - - 0.842 0.872 musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
63. crb3b ENSDARG00000068182 683 1.712 - 0.734 - - - - 0.978 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
64. zfand5a ENSDARG00000018898 3308 1.71 - 0.727 - - - 0.983 - - - zinc finger, AN1-type domain 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1979]
65. zgc:77262 ENSDARG00000044545 5563 1.709 - - 0.725 - - 0.984 - - - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
66. ano10a ENSDARG00000057736 1306 1.708 - 0.730 - - - 0.978 - - - anoctamin 10a [Source:ZFIN;Acc:ZDB-GENE-050913-43]
67. cwc22 ENSDARG00000014008 2385 1.707 - 0.726 - - - 0.981 - - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
68. myo9b ENSDARG00000077410 1956 1.706 - - - - - - 0.973 0.733 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
69. si:ch211-22i13.2 ENSDARG00000043485 4719 1.704 - 0.742 - - 0.962 - - - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
70. bckdk ENSDARG00000016904 3775 1.703 - 0.725 - - 0.978 - - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
71. setbp1 ENSDARG00000093799 4499 1.697 - - - 0.712 - - 0.985 - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
72. nom1 ENSDARG00000060027, ENSDARG00000112720 831 1.695 - 0.718 - - - 0.977 - - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
73. plscr3b ENSDARG00000069432 8500 1.694 - - - - 0.830 0.864 - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
74. nrbp1 ENSDARG00000056089, ENSDARG00000114035 1738 1.693 - 0.710 - - 0.983 - - - - nuclear receptor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-146]
75. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.69 - 0.710 - - - - 0.980 - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
76. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.688 - 0.758 - - - - 0.930 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
77. ino80c ENSDARG00000055719 1512 1.685 - 0.701 - - - - 0.984 - - INO80 complex subunit C [Source:ZFIN;Acc:ZDB-GENE-040625-97]
78. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.685 - - 0.715 - - - 0.970 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
79. smc1al ENSDARG00000058203 8838 1.681 - - 0.746 - 0.935 - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
80. prpf8 ENSDARG00000026180 7026 1.679 - - 0.762 - - - 0.917 - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
81. gpx4b ENSDARG00000076836 8085 1.669 - - - - - 0.950 - 0.719 - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
82. rab1a rab1a 14138 1.663 - - - - - 0.889 0.774 - -
83. mtpn ENSDARG00000104018 4264 1.66 - - - - - 0.954 - 0.706 - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
84. cited4a ENSDARG00000035990 2762 1.66 - 0.830 - - - - - - 0.830 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
85. apex1 ENSDARG00000045843 6345 1.655 - - 0.709 - 0.946 - - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
86. net1 ENSDARG00000032765 6738 1.65 - - - - - 0.838 0.812 - - neuroepithelial cell transforming 1 [Source:ZFIN;Acc:ZDB-GENE-041121-18]
87. MAP4K4 ENSDARG00000098670 4665 1.642 - - 0.707 - - - 0.935 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
88. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.641 - 0.759 - - 0.882 - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
89. parvaa ENSDARG00000043710 3495 1.629 - 0.814 - - - - 0.815 - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
90. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.626 - 0.709 - - - - 0.917 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
91. C2CD2 ENSDARG00000105000 2573 1.624 - - - - - - 0.800 - 0.824 C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
92. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.62 - 0.710 - - - - 0.910 - -
93. sp3a ENSDARG00000001549 1994 1.62 - 0.794 - - - - - - 0.826 sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
94. actn1 ENSDARG00000007219 2919 1.618 - - - - - - 0.842 - 0.776 actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
95. tgif1 ENSDARG00000059337 4020 1.605 - 0.741 - - 0.864 - - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
96. rnps1 ENSDARG00000116743 9994 1.598 - - - - - - - 0.737 0.861 RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
97. tle2 5014 1.589 - - - 0.718 - - - - 0.871 transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
98. SRGAP3 ENSDARG00000060309 5353 1.588 - - - - - - 0.829 0.759 - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
99. twist1a ENSDARG00000030402 3748 1.587 - 0.830 - - - - - - 0.757 twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6]
100. ptgdsb ptgdsb 5200 1.584 - - - - - 0.859 - - 0.725

There are 1378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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