Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for nr4a3

Gene Name Gene ID Reads Annotation
nr4a3 ENSDARG00000055854 113 nuclear receptor subfamily 4, group A, member 3 [Source:ZFIN;Acc:ZDB-GENE-070824-4]










Genes with expression patterns similar to nr4a3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr4a3 ENSDARG00000055854 113 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor subfamily 4, group A, member 3 [Source:ZFIN;Acc:ZDB-GENE-070824-4]
2. TC2N ENSDARG00000095067 146 1.715 - 0.903 - - - - 0.812 - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
3. si:dkey-222o15.5 si:dkey-222o15.5 27 1.689 - 0.939 - - 0.750 - - - -
4. gsg1l ENSDARG00000037390 181 1.653 0.717 0.936 - - - - - - - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
5. si:ch211-255g12.8 ENSDARG00000069627 22 1.63 - 0.899 - - - - 0.731 - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
6. tmbim4 ENSDARG00000014361 2549 1.532 0.717 0.815 - - - - - - - transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
7. pglyrp2 ENSDARG00000062998 11 1.454 - - - 0.702 - - 0.752 - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
8. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 0.952 - 0.952 - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
9. timmdc1 ENSDARG00000053466 2179 0.949 - 0.949 - - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
10. tmem168a ENSDARG00000068705 498 0.949 - 0.949 - - - - - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
11. arhgap4a ENSDARG00000039265 181 0.947 - 0.947 - - - - - - - Rho GTPase activating protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1229]
12. grik1a ENSDARG00000069139 130 0.942 - 0.942 - - - - - - - glutamate receptor, ionotropic, kainate 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6502]
13. TNFRSF11B ENSDARG00000098377 98 0.941 - 0.941 - - - - - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
14. TRMT10A ENSDARG00000036678 621 0.94 - 0.940 - - - - - - - tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
15. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 0.938 - 0.938 - - - - - - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
16. CU928220.2 CU928220.2 537 0.938 - 0.938 - - - - - - -
17. si:ch211-214e3.5 ENSDARG00000074270 755 0.935 - 0.935 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
18. mertk mertk 1232 0.934 - 0.934 - - - - - - -
19. abcb8 ENSDARG00000056672 589 0.934 - 0.934 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050410-6]
20. mak ENSDARG00000059287 144 0.934 - 0.934 - - - - - - - male germ cell-associated kinase [Source:ZFIN;Acc:ZDB-GENE-030131-7279]
21. vhl ENSDARG00000070617 663 0.931 - 0.931 - - - - - - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
22. slc6a13l 121 0.928 - 0.928 - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
23. wu:fc32g12 wu:fc32g12 198 0.928 - 0.928 - - - - - - -
24. tmem141 ENSDARG00000101963 513 0.924 - 0.924 - - - - - - - transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
25. C17H2orf43 C17H2orf43 379 0.919 - 0.919 - - - - - - -
26. gpr173 ENSDARG00000042922 238 0.918 - 0.918 - - - - - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
27. nupl1 nupl1 1100 0.917 - 0.917 - - - - - - -
28. CABZ01071909.1_1 ENSDARG00000117524 86 0.917 - 0.917 - - - - - - -
29. plp2 ENSDARG00000036630 193 0.916 - 0.916 - - - - - - - proteolipid protein 2 [Source:ZFIN;Acc:ZDB-GENE-030710-11]
30. nek2 ENSDARG00000005619 273 0.915 - 0.915 - - - - - - - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
31. MSI1 ENSDARG00000010710 478 0.915 - 0.915 - - - - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
32. fam83b ENSDARG00000078309 318 0.914 - 0.914 - - - - - - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
33. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.914 - 0.914 - - - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
34. zgc:152938 ENSDARG00000102586 97 0.914 - 0.914 - - - - - - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
35. nhej1 ENSDARG00000058893 172 0.914 - 0.914 - - - - - - - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
36. CR925758.1 CR925758.1 83 0.913 - 0.913 - - - - - - -
37. mettl6 ENSDARG00000070085 366 0.913 - 0.913 - - - - - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
38. rxrab ENSDARG00000035127 231 0.912 - 0.912 - - - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
39. ccl25b ENSDARG00000070873 454 0.911 - 0.911 - - - - - - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
40. tctex1d2 ENSDARG00000054255 320 0.911 - 0.911 - - - - - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
41. itsn1 ENSDARG00000000086 684 0.91 - 0.910 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
42. plekha7a ENSDARG00000060813 179 0.91 - 0.910 - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
43. sdk1a ENSDARG00000078866 159 0.909 - 0.909 - - - - - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
44. nsfa ENSDARG00000007654 16 0.908 - - - 0.908 - - - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
45. wdyhv1 ENSDARG00000070403 42 0.907 - 0.907 - - - - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
46. katnbl1 ENSDARG00000042522 1086 0.907 - 0.907 - - - - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
47. si:dkey-61l1.4 ENSDARG00000092567 1012 0.907 - 0.907 - - - - - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
48. si:dkey-162h11.3 41 0.906 - 0.906 - - - - - - - si:dkey-162h11.3, transcript variant X2
49. kat6a ENSDARG00000018907 250 0.906 - 0.906 - - - - - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
50. GFRAL ENSDARG00000089709 167 0.906 - 0.906 - - - - - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
51. mapre1a ENSDARG00000042927 164 0.905 - 0.905 - - - - - - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
52. GPR97 GPR97 9 0.904 - 0.904 - - - - - - -
53. tmprss13a ENSDARG00000100969 84 0.904 - 0.904 - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
54. tirap ENSDARG00000074371 10 0.904 - 0.904 - - - - - - - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
55. zgc:92326 zgc:92326 94 0.904 - 0.904 - - - - - - -
56. elavl2 ENSDARG00000040732 44 0.904 - 0.904 - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
57. CU929163.1 CU929163.1 11 0.904 - 0.904 - - - - - - -
58. klhdc8b ENSDARG00000090787 33 0.904 - 0.904 - - - - - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
59. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.904 - 0.904 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
60. si:ch211-227e10.1 ENSDARG00000103197, ENSDARG00000104968 6 0.904 - 0.904 - - - - - - - si:ch211-227e10.1 [Source:ZFIN;Acc:ZDB-GENE-050420-221]
61. CABZ01081656.1 CABZ01081656.1 14 0.904 - 0.904 - - - - - - -
62. si:dkey-173l11.3 si:dkey-173l11.3 14 0.904 - 0.904 - - - - - - -
63. si:dkey-192i18.3 si:dkey-192i18.3 47 0.904 - 0.904 - - - - - - -
64. si:ch211-284e13.4 ENSDARG00000060330 6 0.904 - 0.904 - - - - - - - si:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
65. grip2b ENSDARG00000027618 9 0.904 - 0.904 - - - - - - - glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
66. dio2 ENSDARG00000094857 17 0.904 - 0.904 - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
67. BX004816.4 BX004816.4 33 0.904 - 0.904 - - - - - - -
68. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 0.904 - 0.904 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
69. dpt ENSDARG00000056178 7 0.904 - 0.904 - - - - - - - dermatopontin [Source:ZFIN;Acc:ZDB-GENE-060312-9]
70. slc43a3b ENSDARG00000057949 194 0.904 - 0.904 - - - - - - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
71. SNORA53 SNORA53 10 0.904 - 0.904 - - - - - - -
72. si:ch1073-228j22.1 ENSDARG00000095799 98 0.903 - 0.903 - - - - - - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
73. btbd9 ENSDARG00000068983 356 0.903 - 0.903 - - - - - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
74. cdx1a ENSDARG00000114554 28 0.903 - 0.903 - - - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
75. gng8 ENSDARG00000042970 117 0.903 - 0.903 - - - - - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
76. stk38l ENSDARG00000045482 266 0.902 - 0.902 - - - - - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
77. pcdh1b ENSDARG00000036175 101 0.902 - 0.902 - - - - - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
78. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.902 - 0.902 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
79. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 0.902 - 0.902 - - - - - - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
80. BX465203.2 BX465203.2 23 0.902 - 0.902 - - - - - - -
81. pole ENSDARG00000058533, ENSDARG00000115430 381 0.901 - 0.901 - - - - - - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
82. CU855953.1 CU855953.1 137 0.9 - 0.900 - - - - - - -
83. THEM6_1 ENSDARG00000103914 469 0.9 - 0.900 - - - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
84. CR318593.1 CR318593.1 290 0.9 - 0.900 - - - - - - -
85. CR354432.1 CR354432.1 424 0.9 - 0.900 - - - - - - -
86. si:ch211-236p5.2 ENSDARG00000086256 8 0.899 - 0.899 - - - - - - - si:ch211-236p5.2 [Source:ZFIN;Acc:ZDB-GENE-081028-33]
87. znhit2 ENSDARG00000030805 197 0.898 - - - - - - 0.898 - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
88. SLC22A15 ENSDARG00000055445 111 0.898 - 0.898 - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
89. sfmbt2 ENSDARG00000045519 251 0.897 - 0.897 - - - - - - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
90. itgb6 ENSDARG00000002494 559 0.897 - 0.897 - - - - - - - integrin, beta 6 [Source:ZFIN;Acc:ZDB-GENE-100812-2]
91. magoh ENSDARG00000038635, ENSDARG00000109837 2880 0.897 - 0.897 - - - - - - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
92. acaa1 ENSDARG00000004687 557 0.896 - 0.896 - - - - - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
93. adora2aa ENSDARG00000033706, ENSDARG00000114856 144 0.896 - 0.896 - - - - - - - adenosine A2a receptor a [Source:ZFIN;Acc:ZDB-GENE-080723-28]
94. COBLL1 COBLL1 14 0.896 - 0.896 - - - - - - -
95. cables1 ENSDARG00000099395 361 0.895 - 0.895 - - - - - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
96. arhgef18b ENSDARG00000042308 298 0.894 - 0.894 - - - - - - - rho/rac guanine nucleotide exchange factor (GEF) 18b [Source:ZFIN;Acc:ZDB-GENE-070705-462]
97. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.894 - 0.894 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
98. TRIM14_7 TRIM14_7 381 0.894 - 0.894 - - - - - - -
99. C21H18orf25 C21H18orf25 800 0.894 - 0.894 - - - - - - -
100. b3gnt3.4 ENSDARG00000058100 117 0.893 - 0.893 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]

There are 797 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA