Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr4a1

Gene Name Gene ID Reads Annotation
nr4a1 ENSDARG00000000796, ENSDARG00000109473 1072 nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11]










Genes with expression patterns similar to nr4a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr4a1 ENSDARG00000000796, ENSDARG00000109473 1072 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor subfamily 4, group A, member 1 [Source:ZFIN;Acc:ZDB-GENE-040704-11]
2. mybpc2b ENSDARG00000021265 9618 2.281 - - - 0.705 - - 0.873 0.703 - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
3. BX324201.1 BX324201.1 3302 1.938 - 0.996 - - - - 0.942 - -
4. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 1.853 - 0.986 - - - - 0.867 - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
5. smyd2a ENSDARG00000055151 2505 1.852 - 0.993 - - - - 0.859 - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
6. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.84 - 0.990 - - - - 0.850 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
7. hadhab ENSDARG00000060594 3664 1.834 - 0.995 - - - - 0.839 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
8. ddx19 ENSDARG00000005699 4602 1.824 - 0.990 - - - - 0.834 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
9. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.822 - 0.911 - - - - 0.911 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
10. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.773 - - - - - 0.872 0.901 - -
11. ccdc80 ENSDARG00000000002 1284 1.772 - 0.999 - - - - 0.773 - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
12. larsb ENSDARG00000019280 3924 1.731 - 0.863 - - - - 0.868 - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
13. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 1.73 - 0.979 - - - - 0.751 - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]
14. cnbpb ENSDARG00000070922 14606 1.726 - - - - - 0.791 0.935 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
15. cap2 ENSDARG00000104478 3266 1.701 - - - - - - 0.923 0.778 - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
16. chrnb1 ENSDARG00000069660, ENSDARG00000112115, ENSDARG00000113395 1438 1.675 - - - - - 0.764 0.911 - - cholinergic receptor, nicotinic, beta 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-070821-4]
17. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.673 - - - - - 0.757 0.916 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
18. myom1a ENSDARG00000061249 10230 1.672 - - - - - - 0.959 0.713 - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
19. srpk3 ENSDARG00000005916 1546 1.668 - - - - - 0.756 0.912 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
20. sar1ab ENSDARG00000033320 3984 1.664 - - - - - - 0.956 0.708 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
21. sdha ENSDARG00000016721 8255 1.663 - 0.863 - - - - 0.800 - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
22. bin1 bin1 3199 1.658 - - - - - 0.846 0.812 - -
23. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.654 - - - - - - 0.941 0.713 - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
24. DNAJA4 ENSDARG00000051762 5657 1.639 - - - - - - 0.936 0.703 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
25. cacna1sa ENSDARG00000029457 883 1.637 - - - - 0.709 - 0.928 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
26. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.634 - - - - - 0.722 0.912 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
27. trim55a ENSDARG00000029596 2858 1.616 - - - - - 0.776 0.840 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
28. enpp1 ENSDARG00000005789 3267 1.612 - - - - - 0.746 0.866 - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
29. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 1.604 - 0.796 - - - - 0.808 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
30. FSD2 518 1.569 - - - - - 0.708 0.861 - - fibronectin type III and SPRY domain containing 2
31. CR450814.3 CR450814.3 608 1.542 - - - - - - 0.779 0.763 -
32. mrpl14 ENSDARG00000068886 1991 1.509 - - - - - 0.747 0.762 - - mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
33. tpma ENSDARG00000033683 752432 1.495 - - - 0.701 - - 0.794 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
34. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.482 - - - - - 0.709 0.773 - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
35. mylz3 ENSDARG00000017441 303597 1.478 - - - - - - 0.729 0.749 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
36. metap2b_1 ENSDARG00000102571 5507 1.469 - - - - - 0.732 0.737 - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
37. cox6b2 ENSDARG00000037860 33134 1.46 - - - - - 0.753 0.707 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
38. eef2l2 ENSDARG00000035256 6815 1.459 - - - 0.709 - - 0.750 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
39. tmtc4 ENSDARG00000020447 873 0.999 - 0.999 - - - - - - - transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
40. dzip1 ENSDARG00000000943, ENSDARG00000113867 911 0.999 - 0.999 - - - - - - - DAZ interacting zinc finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-040526-1]
41. pak6b ENSDARG00000052405 537 0.999 - 0.999 - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 6b [Source:ZFIN;Acc:ZDB-GENE-041014-121]
42. ap1g1 ENSDARG00000102394 818 0.999 - 0.999 - - - - - - - adaptor related protein complex 1 subunit gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3187]
43. NRD1 NRD1 3486 0.999 - 0.999 - - - - - - -
44. mgat1b ENSDARG00000036065 996 0.999 - 0.999 - - - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
45. psmg2 ENSDARG00000035987 1938 0.999 - 0.999 - - - - - - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
46. colgalt2 ENSDARG00000014670 1932 0.999 - 0.999 - - - - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
47. notch1b ENSDARG00000052094 7874 0.999 - 0.999 - - - - - - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
48. med12 ENSDARG00000103953, ENSDARG00000109815, ENSDARG00000116469 1894 0.999 - 0.999 - - - - - - - mediator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-060125-1]
49. DDX24 ENSDARG00000104708 861 0.999 - 0.999 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]
50. mphosph6 ENSDARG00000093007 340 0.999 - 0.999 - - - - - - - M-phase phosphoprotein 6 [Source:ZFIN;Acc:ZDB-GENE-040801-137]
51. trmt11 ENSDARG00000040033 1348 0.999 - 0.999 - - - - - - - tRNA methyltransferase 11 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-953]
52. CABZ01112358.1 CABZ01112358.1 667 0.999 - 0.999 - - - - - - -
53. casc5 1487 0.999 - 0.999 - - - - - - - cancer susceptibility candidate 5, transcript variant X3
54. serinc5 ENSDARG00000008153 2863 0.999 - 0.999 - - - - - - - serine incorporator 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2918]
55. plagl2 ENSDARG00000076657 2057 0.999 - 0.999 - - - - - - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
56. ddx27 ENSDARG00000091831 1471 0.998 - 0.998 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
57. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 0.998 - 0.998 - - - - - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
58. rabggtb ENSDARG00000068587 1935 0.998 - 0.998 - - - - - - - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
59. slc25a33 ENSDARG00000039931 2794 0.998 - 0.998 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier), member 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2183]
60. PWWP2A ENSDARG00000075526 2163 0.998 - 0.998 - - - - - - - PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
61. kat2a ENSDARG00000104734 802 0.998 - 0.998 - - - - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
62. NPR2 ENSDARG00000104393 1875 0.998 - 0.998 - - - - - - - natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
63. ppp3cca ENSDARG00000014962, ENSDARG00000112030 1301 0.998 - 0.998 - - - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, a [Source:ZFIN;Acc:ZDB-GENE-030829-36]
64. entpd1 ENSDARG00000045066 2930 0.998 - 0.998 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-58]
65. pmm2 ENSDARG00000037654 1783 0.998 - 0.998 - - - - - - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
66. klc2 3058 0.998 - 0.998 - - - - - - - kinesin light chain 2
67. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 0.998 - 0.998 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
68. SMAD4 SMAD4 3233 0.998 - 0.998 - - - - - - -
69. TMEM106C ENSDARG00000098105 793 0.998 - 0.998 - - - - - - - transmembrane protein 106C [Source:ZFIN;Acc:ZDB-GENE-061013-562]
70. swi5 ENSDARG00000078492 1299 0.997 - 0.997 - - - - - - - SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]
71. sf3a2 ENSDARG00000021107 2929 0.997 - 0.997 - - - - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
72. aurkb ENSDARG00000037640 4874 0.997 - 0.997 - - - - - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
73. CABZ01074130.1 ENSDARG00000105274 26501 0.997 - 0.997 - - - - - - -
74. aldh9a1b ENSDARG00000037061 2638 0.997 - 0.997 - - - - - - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
75. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.997 - 0.997 - - - - - - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
76. irf6 ENSDARG00000101986 1438 0.997 - 0.997 - - - - - - - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
77. si:ch73-265d7.2 ENSDARG00000116713 2142 0.997 - 0.997 - - - - - - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
78. vcp ENSDARG00000020008, ENSDARG00000116074 2284 0.997 - 0.997 - - - - - - - valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
79. klhl40b ENSDARG00000019125 3633 0.997 - 0.997 - - - - - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
80. pknox1.1 ENSDARG00000018765 2149 0.996 - 0.996 - - - - - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
81. ptprfa ENSDARG00000103479 1250 0.996 - 0.996 - - - - - - - protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
82. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 0.996 - 0.996 - - - - - - - erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
83. wu:fc34e06 1793 0.995 - 0.995 - - - - - - - wu:fc34e06, transcript variant X10
84. ebag9 ENSDARG00000040021 2217 0.995 - 0.995 - - - - - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
85. slc30a7 ENSDARG00000019998, ENSDARG00000112372 2967 0.995 - 0.995 - - - - - - - solute carrier family 30 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5650]
86. mcm2 ENSDARG00000102798 8148 0.995 - 0.995 - - - - - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
87. nutf2l ENSDARG00000014499 3927 0.994 - 0.994 - - - - - - - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
88. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 0.994 - 0.994 - - - - - - - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
89. gnsb ENSDARG00000098296 1075 0.994 - 0.994 - - - - - - - glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b [Source:ZFIN;Acc:ZDB-GENE-030131-5846]
90. pbx2 ENSDARG00000019717 6892 0.994 - 0.994 - - - - - - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
91. tubb5 ENSDARG00000037997 18691 0.994 - 0.994 - - - - - - - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
92. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 0.993 - 0.993 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
93. tuba8l3 ENSDARG00000070155 7525 0.992 - 0.992 - - - - - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
94. otud5a ENSDARG00000059006 2073 0.992 - 0.992 - - - - - - - OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
95. r3hdm1 ENSDARG00000101458 5241 0.992 - 0.992 - - - - - - - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
96. pip5k2 pip5k2 5743 0.992 - 0.992 - - - - - - -
97. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 0.991 - 0.991 - - - - - - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
98. mcrs1 ENSDARG00000020840 3232 0.991 - 0.991 - - - - - - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
99. khsrp ENSDARG00000026489 15738 0.982 - 0.982 - - - - - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
100. si:ch211-114l13.11 si:ch211-114l13.11 4727 0.98 - 0.980 - - - - - - -

There are 938 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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