Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr3c1

Gene Name Gene ID Reads Annotation
nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]










Genes with expression patterns similar to nr3c1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
2. gabarapl2 ENSDARG00000027200 5120 3.018 - 0.706 - - - 0.706 0.741 0.865 - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
3. arpc5a ENSDARG00000039142 5482 1.833 - - - - - 0.862 - 0.971 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
4. tom1 ENSDARG00000104581 1457 1.829 - - - - - 0.884 - 0.945 - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
5. rabac1 ENSDARG00000004171 2708 1.821 - - - - - 0.888 - 0.933 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
6. elovl6l ENSDARG00000038639 1184 1.802 - - - - - 0.842 - 0.960 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
7. bcar1 ENSDARG00000056525 6563 1.781 - - - - - 0.896 - 0.885 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
8. C17H15orf57 C17H15orf57 1366 1.77 - - - - - 0.791 - 0.979 -
9. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.761 - - - - - 0.794 - 0.967 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
10. map2k6 ENSDARG00000099184 8741 1.751 - - - - - 0.833 - 0.918 - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
11. CABZ01057013.1 CABZ01057013.1 1308 1.736 - - - - - 0.785 - 0.951 -
12. epn2 ENSDARG00000008377 5458 1.731 - - - - - 0.902 0.829 - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
13. casc5 1487 1.722 - - - - - 0.770 - 0.952 - cancer susceptibility candidate 5, transcript variant X3
14. serpinh1a ENSDARG00000075954 6488 1.721 - - - - - - 0.813 0.908 - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
15. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.718 - - - - - 0.739 - 0.979 -
16. slc1a5 ENSDARG00000099186 7580 1.703 - - - - - - 0.767 0.936 - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
17. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.703 - - - - - 0.774 - 0.929 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
18. slc39a7 ENSDARG00000104451 6368 1.701 - - - - - 0.820 - 0.881 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
19. dusp7 ENSDARG00000101413 1307 1.699 - - - - - 0.773 - 0.926 - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
20. slc44a2 ENSDARG00000037059 1903 1.676 - 0.777 - - - 0.899 - - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
21. ell ENSDARG00000000568 1404 1.671 - - - - - - 0.712 0.959 - elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
22. selj 884 1.666 - 0.804 - - - 0.862 - - - selenoprotein J
23. rrbp1a ENSDARG00000013763 4723 1.663 - - - - - 0.833 - 0.830 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
24. si:ch211-11k18.4 ENSDARG00000087869 3298 1.657 - - - - - 0.718 - 0.939 - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
25. ppp1r12a ENSDARG00000010784 4333 1.655 - - - - - 0.874 0.781 - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
26. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.647 - - - - - 0.893 0.754 - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
27. oxsr1b ENSDARG00000027500 1324 1.633 - - - - - 0.813 0.820 - - oxidative stress responsive 1b [Source:ZFIN;Acc:ZDB-GENE-040426-723]
28. tjp2a ENSDARG00000063309 1947 1.629 - 0.741 - - - 0.888 - - - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
29. cnot8 ENSDARG00000020043 866 1.629 - 0.715 - - - 0.914 - - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
30. cbfa2t2 ENSDARG00000074337 4323 1.627 - 0.822 - - - 0.805 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
31. capn8 ENSDARG00000055715, ENSDARG00000111228 497 1.626 - 0.703 - - - 0.923 - - - calpain 8 [Source:ZFIN;Acc:ZDB-GENE-050522-279]
32. setd2 ENSDARG00000062244 808 1.619 - 0.737 - - - 0.882 - - - SET domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2140]
33. adam15 ENSDARG00000089213 359 1.609 - 0.758 - - - 0.851 - - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
34. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 1.608 - - - - - 0.855 0.753 - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
35. PCSK6 ENSDARG00000104574 710 1.604 - 0.720 - - - 0.884 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
36. C2CD2 ENSDARG00000105000 2573 1.598 - 0.728 - - - 0.870 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
37. CR847496.2 ENSDARG00000116070 802 1.588 - - - - - 0.856 0.732 - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
38. si:ch211-226m16.2 ENSDARG00000036785 2163 1.585 - - - - - - 0.706 0.879 - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
39. bcas2 ENSDARG00000043631 1971 1.548 - - - - - 0.797 0.751 - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
40. pof1b ENSDARG00000054060 2355 1.545 - 0.843 - - - - 0.702 - - POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
41. CU915738.1 CU915738.1 3723 1.54 - - - - - 0.727 - 0.813 -
42. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.537 0.712 - - - - 0.825 - - -
43. rfx1b ENSDARG00000075904 1175 1.517 - 0.748 - - - 0.769 - - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
44. brd8 ENSDARG00000025071 2605 1.512 - - - - - 0.786 - 0.726 - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
45. AIM1L AIM1L 899 1.493 - 0.703 - - - 0.790 - - -
46. znf185 ENSDARG00000103917 7195 1.491 - - - - - 0.718 - 0.773 - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
47. tmem45b ENSDARG00000056239 2395 1.484 - - - - - 0.770 0.714 - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
48. clptm1 ENSDARG00000018973, ENSDARG00000109534, ENSDARG00000114443 2439 1.483 - - - - - 0.727 0.756 - - cleft lip and palate associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-265]
49. RBM22 ENSDARG00000010238 493 1.476 - 0.733 - - - - 0.743 - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
50. chmp2bb ENSDARG00000002190 4629 1.474 - - - - - - 0.722 0.752 - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
51. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.465 - 0.757 - - - - 0.708 - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
52. KIF4A KIF4A 3322 1.463 - 0.753 - - - - - 0.710 -
53. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.425 - - - - - 0.702 0.723 - - pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
54. capg capg 2569 1.407 - - - - - 0.706 0.701 - -
55. pcyt2 ENSDARG00000043003 3506 0.986 - - - - - - - 0.986 - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
56. epc1 epc1 1164 0.984 - - - - - - - 0.984 -
57. kmt2d ENSDARG00000037060 1232 0.982 - - - - - - - 0.982 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
58. golga4 ENSDARG00000075331 447 0.981 - - - - - - - 0.981 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
59. myo9b ENSDARG00000077410 1956 0.981 - - - - - - - 0.981 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
60. slc6a11a ENSDARG00000074002 189 0.981 - - - - - - - 0.981 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
61. cxxc1l cxxc1l 1035 0.981 - - - - - - - 0.981 -
62. PARP14 PARP14 164 0.98 - - - - - - - 0.980 -
63. hsd17b4 ENSDARG00000101239 301 0.98 - - - - - - - 0.980 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
64. smyd5 ENSDARG00000071669 1194 0.98 - - - - - - - 0.980 - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
65. ftr23 ENSDARG00000067985 254 0.98 - - - - - - - 0.980 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
66. CABZ01073405.1 CABZ01073405.1 275 0.98 - - - - - - - 0.980 -
67. C6H1orf159 C6H1orf159 406 0.98 - - - - - - - 0.980 -
68. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.98 - - - - - - - 0.980 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
69. zgc:113019 ENSDARG00000099743 994 0.98 - - - - - - - 0.980 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
70. hcst ENSDARG00000092074 172 0.98 - - - - - - - 0.980 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
71. rdh12 ENSDARG00000018069 396 0.98 - - - - - - - 0.980 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
72. GGT7 ENSDARG00000115805 481 0.979 - - - - - - - 0.979 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
73. RIN3 ENSDARG00000077618 745 0.979 - - - - - - - 0.979 - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
74. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.979 - - - - - - - 0.979 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
75. sly1 sly1 2403 0.979 - - - - - - - 0.979 -
76. USP6 USP6 613 0.979 - - - - - - - 0.979 -
77. wscd2 ENSDARG00000061819 304 0.979 - - - - - - - 0.979 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
78. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.978 - - - - - - - 0.978 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
79. si:dkey-238o14.5 si:dkey-238o14.5 450 0.978 - - - - - - - 0.978 -
80. kctd10 ENSDARG00000017115 1659 0.978 - - - - - - - 0.978 - potassium channel tetramerization domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2843]
81. si:dkey-38p12.2 si:dkey-38p12.2 504 0.978 - - - - - - - 0.978 -
82. slc30a9 ENSDARG00000057272 766 0.978 - - - - - - - 0.978 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
83. pir ENSDARG00000056638 722 0.978 - - - - - - - 0.978 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
84. araf ENSDARG00000054533 1132 0.978 - - - - - - - 0.978 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
85. fam96b 2255 0.978 - - - - - - - 0.978 - family with sequence similarity 96, member B
86. si:dkey-3h3.3 ENSDARG00000067718 225 0.978 - - - - - - - 0.978 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
87. vps4b ENSDARG00000069175 1922 0.978 - - - - - - - 0.978 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
88. agk ENSDARG00000009837, ENSDARG00000113514 811 0.978 - - - - - - - 0.978 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
89. TAF4 TAF4 658 0.978 - - - - - - - 0.978 -
90. prelid1b ENSDARG00000044169 501 0.978 - - - - - - - 0.978 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
91. TUBGCP6 1991 0.976 - - - - - - - 0.976 - tubulin, gamma complex associated protein 6
92. si:dkey-204f11.64 ENSDARG00000094695 586 0.976 - - - - - - - 0.976 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
93. agtr1b ENSDARG00000045443 232 0.975 - - - - - - - 0.975 - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
94. cnp ENSDARG00000070822 649 0.975 - - - - - - - 0.975 - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
95. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 0.975 - - - - - - - 0.975 - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
96. paxip1 ENSDARG00000005606 1417 0.975 - - - - - - - 0.975 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
97. zgc:113364 ENSDARG00000037192 339 0.975 - - - - - - - 0.975 - zgc:113364 [Source:ZFIN;Acc:ZDB-GENE-050410-5]
98. nptx1l ENSDARG00000074671 569 0.974 - - - - - - - 0.974 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
99. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.974 - - - - - - - 0.974 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
100. WDR77 2463 0.974 - - - - - - - 0.974 - WD repeat domain 77

There are 1199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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