Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr2e3

Gene Name Gene ID Reads Annotation
nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]










Genes with expression patterns similar to nr2e3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
2. UNC119 UNC119 104 3.634 - - 1.000 0.840 0.965 - - 0.829 -
3. guca1g ENSDARG00000045737, ENSDARG00000114717 22 2.837 - - 1.000 0.872 0.965 - - - - guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
4. ETV3L ETV3L 67 2.836 - - 1.000 0.879 0.957 - - - -
5. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 2.722 - - 0.987 - 0.934 - - - 0.801 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
6. syt5b ENSDARG00000011640 70 2.481 - - - - 0.931 - - 0.785 0.765 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
7. rpe65a ENSDARG00000007480 52 2.405 - - 0.749 0.728 0.928 - - - - retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
8. zgc:158340 zgc:158340 21 2.402 - - 0.843 0.797 - - - - 0.762
9. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 2.251 - - - 0.840 0.704 - - 0.707 - opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
10. zgc:109965 ENSDARG00000012126 11 1.965 - - 1.000 - 0.965 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
11. CR356223.2_1 ENSDARG00000100655 1 1.965 - - - - 0.965 - 1.000 - -
12. guk1b ENSDARG00000005776 23 1.965 - - 1.000 - 0.965 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
13. RCVRN_1 RCVRN_1 46 1.956 - - 1.000 - 0.956 - - - -
14. gnat1 ENSDARG00000044199 251 1.951 - - 1.000 - 0.951 - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
15. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1.923 - - 1.000 - 0.923 - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
16. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.84 - - 1.000 0.840 - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
17. si:ch211-260o22.1 si:ch211-260o22.1 34 1.827 - - 0.965 - 0.862 - - - -
18. si:ch211-57i17.2 ENSDARG00000093354 58 1.78 - - 1.000 - - - - 0.780 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
19. ZNF337_21 ZNF337_21 53 1.78 - - - - - - 1.000 0.780 -
20. gnat2 ENSDARG00000042529 112 1.779 - - 1.000 - - - - 0.779 - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
21. bsx ENSDARG00000068976, ENSDARG00000110782 139 1.766 - - - - 0.891 - - 0.875 - brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
22. sept4a ENSDARG00000010385 75 1.706 - - - - - - 0.806 - 0.900 septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
23. elovl4b ENSDARG00000027495 107 1.701 - - - - - - - 0.865 0.836 ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
24. edn3b ENSDARG00000086669 8 1.688 - - 0.723 - 0.965 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
25. pde6g 8 1.682 - - 0.800 0.882 - - - - - phosphodiesterase 6G, cGMP-specific, rod, gamma
26. CABZ01088365.1 CABZ01088365.1 66 1.679 - - - - - - 0.956 - 0.723
27. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 1.669 - - - - - - 0.822 0.847 - BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
28. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.636 - - - - - - 0.781 - 0.855 protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
29. rs1 rs1 70 1.625 - - - - 0.892 - - - 0.733
30. gtf3c3 ENSDARG00000043247 202 1.594 - - - - - - 0.811 0.783 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
31. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1.593 - - - 0.795 0.798 - - - - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
32. slc6a2 ENSDARG00000016141 49 1.589 - - - - 0.888 - - - 0.701 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
33. slco5a1 slco5a1 383 1.571 - - - - - - - 0.816 0.755
34. slc24a3 ENSDARG00000006760 418 1.565 - - - - - - 0.851 0.714 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-67]
35. KHDRBS3 ENSDARG00000101020 408 1.552 - - - - - - - 0.798 0.754 KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
36. zic5 ENSDARG00000016022 1034 1.534 - - - - - - - 0.827 0.707 zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
37. ino80da ENSDARG00000104727 8 1.529 - - - 0.724 0.805 - - - - INO80 complex subunit Da [Source:ZFIN;Acc:ZDB-GENE-091204-416]
38. syt1a ENSDARG00000030614 542 1.497 - - - - - - - 0.788 0.709 synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
39. olfcg4 ENSDARG00000099773 1 1 - - 1.000 - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
40. naa40_1 ENSDARG00000024109, ENSDARG00000090570 1 1 - - 1.000 - - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
41. AL954698.2 ENSDARG00000102132 28 1 - - 1.000 - - - - - -
42. rh50 ENSDARG00000041848 0 1 - - 1.000 - - - - - - Rh50-like protein [Source:ZFIN;Acc:ZDB-GENE-000427-1]
43. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - - 1.000 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
44. si:dkey-26c10.5 ENSDARG00000088023 9 1 - - 1.000 - - - - - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
45. CR759816.1 ENSDARG00000098977 27 1 - - 1.000 - - - - - -
46. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - 1.000 - - - - - -
47. si:dkey-251i8.2 si:dkey-251i8.2 2 1 - - - - - - 1.000 - -
48. cnga3b ENSDARG00000012297 2 1 - - 1.000 - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
49. CCDC120 ENSDARG00000032856, ENSDARG00000114382 30 1 - - - - - - 1.000 - - coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
50. si:dkey-11f7.5 si:dkey-11f7.5 0 1 - - 1.000 - - - - - -
51. MCOLN3 MCOLN3 4 1 - - - - - - 1.000 - -
52. si:ch211-223g7.2 ENSDARG00000103265 1 1 - - 1.000 - - - - - - si:ch211-223g7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-153]
53. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - - - - - - 1.000 - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
54. C12H17orf62 C12H17orf62 4 1 - - 1.000 - - - - - -
55. SH2D2A SH2D2A 31 1 - - 1.000 - - - - - -
56. si:ch211-145h19.2 7 1 - - - - - - 1.000 - - si:ch211-145h19.2
57. SLC1A7 SLC1A7 3 1 - - 1.000 - - - - - -
58. CR391998.1 ENSDARG00000091817 15 1 - - - - - - 1.000 - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
59. crybb2 ENSDARG00000053512 15 1 - - 1.000 - - - - - - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
60. CR450780.4 CR450780.4 0 1 - - 1.000 - - - - - -
61. ptchd1 ENSDARG00000018066 3 1 - - 1.000 - - - - - - patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
62. si:dkey-27p18.3 ENSDARG00000092228 38 1 - - - - - - 1.000 - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
63. si:ch211-176m18.1 si:ch211-176m18.1 27 1 - - 1.000 - - - - - -
64. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - 1.000 - - - - - -
65. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - 1.000 - - - - - -
66. SIPA1L2 ENSDARG00000061640 2 1 - - 1.000 - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
67. BX510935.2 BX510935.2 1 1 - - 1.000 - - - - - -
68. RP1 ENSDARG00000077687 6 1 - - 1.000 - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
69. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - 1.000 - - - - - -
70. snoU13 snoU13 2 1 - - 1.000 - - - - - -
71. rasgrf2b ENSDARG00000002816, ENSDARG00000115886 0 1 - - 1.000 - - - - - - Ras protein-specific guanine nucleotide-releasing factor 2b [Source:ZFIN;Acc:ZDB-GENE-060504-1]
72. ZNF70_3 ZNF70_3 0 1 - - 1.000 - - - - - -
73. trim54 ENSDARG00000029907 10 1 - - 1.000 - - - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
74. zgc:173556 82 1 - - - - - - 1.000 - - zgc:173556
75. got1 ENSDARG00000039093 1 1 - - 1.000 - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
76. CU464131.1 CU464131.1 0 1 - - 1.000 - - - - - -
77. arhgap17a ENSDARG00000020488, ENSDARG00000113457 11 1 - - 1.000 - - - - - - Rho GTPase activating protein 17a [Source:ZFIN;Acc:ZDB-GENE-050417-56]
78. BX901889.2 ENSDARG00000078427 0 1 - - 1.000 - - - - - -
79. zgc:153151 ENSDARG00000069563 126 1 - - 1.000 - - - - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
80. pcdh2ab6 ENSDARG00000091043 1 1 - - 1.000 - - - - - - protocadherin 2 alpha b 6 [Source:ZFIN;Acc:ZDB-GENE-041118-5]
81. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - - - - - - 1.000 - -
82. BX957353.1 BX957353.1 10 1 - - - - - - 1.000 - -
83. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - - - - 1.000 - -
84. kcnk15 ENSDARG00000077371 1 1 - - 1.000 - - - - - - potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
85. CNGB3 CNGB3 7 1 - - - - - - 1.000 - -
86. rxfp1 ENSDARG00000090071 6 1 - - 1.000 - - - - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
87. slc6a14 ENSDARG00000029866 61 1 - - 1.000 - - - - - - solute carrier family 6 (amino acid transporter), member 14 [Source:ZFIN;Acc:ZDB-GENE-130411-2]
88. CU929036.1 CU929036.1 7 1 - - 1.000 - - - - - -
89. BX548011.3 ENSDARG00000113526 2 1 - - 1.000 - - - - - -
90. DLEU7 DLEU7 91 1 - - - - - - 1.000 - -
91. ugt5c1 ENSDARG00000061444 6 1 - - - - - - 1.000 - - UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
92. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1 - - - - - - 1.000 - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
93. CR848788.1 ENSDARG00000103037 1 1 - - 1.000 - - - - - -
94. USH1G USH1G 25 1 - - - - - - 1.000 - -
95. si:ch1073-162e11.2 si:ch1073-162e11.2 5 1 - - 1.000 - - - - - -
96. zgc:165539 ENSDARG00000027639 20 1 - - - - - - 1.000 - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
97. helt ENSDARG00000056400 482 1 - - - - - - 1.000 - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
98. zgc:171452 ENSDARG00000074069 6 1 - - - - - - 1.000 - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
99. gfra1a ENSDARG00000099732 33 1 - - - - - - 1.000 - - gdnf family receptor alpha 1a [Source:ZFIN;Acc:ZDB-GENE-010226-2]
100. erlec1 ENSDARG00000086309 1 1 - - 1.000 - - - - - - endoplasmic reticulum lectin 1 [Source:ZFIN;Acc:ZDB-GENE-030521-15]

There are 1052 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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