Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for nr2e1

Gene Name Gene ID Reads Annotation
nr2e1 ENSDARG00000017107 340 nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]










Genes with expression patterns similar to nr2e1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. nr2e1 ENSDARG00000017107 340 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
2. lhx2b ENSDARG00000031222 517 2.68 - - 0.870 - 0.908 - - 0.902 - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
3. otx1b 96 2.602 - - - 0.749 - - - 0.926 0.927 orthodenticle homeobox 1b
4. fezf2 ENSDARG00000070677 224 2.517 - - 0.806 - 0.907 - - - 0.804 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
5. her2 ENSDARG00000038205 3219 2.448 - - - 0.823 - - - 0.799 0.826 hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
6. BX324132.5 BX324132.5 115 2.432 - - - 0.721 0.949 - - - 0.762
7. slc29a1a ENSDARG00000101289 2074 2.406 - - 0.780 0.870 - - - 0.756 - solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
8. gpr37l1a ENSDARG00000006079 422 2.391 - - - 0.700 - - - 0.924 0.767 G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
9. vezf1a ENSDARG00000008247 1449 2.387 - - - 0.780 - - - 0.794 0.813 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
10. otx2 766 2.351 - - 0.715 0.771 - - - - 0.865 orthodenticle homeobox 2, transcript variant X2
11. zic1 ENSDARG00000015567 2520 2.321 - - - 0.745 - - - 0.863 0.713 zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
12. bsx ENSDARG00000068976, ENSDARG00000110782 139 2.31 - - 0.702 - - - - 0.871 0.737 brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
13. caps2 ENSDARG00000058486 4 2 1.000 - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
14. otx1a 1607 1.927 1.000 - - - - - - - 0.927 orthodenticle homeobox 1a
15. glipr1b ENSDARG00000030078 73 1.855 - - - - - 0.966 - 0.889 - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
16. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.785 - - - - 0.785 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
17. rlbp1a ENSDARG00000012504 111 1.772 - - - 0.875 - - - 0.897 - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
18. dlx1a ENSDARG00000013125 142 1.772 0.858 - - - 0.914 - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
19. nfia ENSDARG00000062420 573 1.761 - - - - - - - 0.890 0.871 nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]
20. celsr1b ENSDARG00000058259 1219 1.761 - - - - - - - 0.914 0.847 cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
21. DMBX1 DMBX1 140 1.757 - - - 0.806 - - - - 0.951
22. si:ch211-67e16.4 ENSDARG00000086317 609 1.753 0.858 - - - - - - 0.895 - si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]
23. cntnap5a ENSDARG00000073920 39 1.733 - - 0.733 - - 1.000 - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
24. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.727 - - 0.765 - - - - 0.962 - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
25. sparcl1 ENSDARG00000074989 80 1.721 - - 0.721 - - 1.000 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
26. WNK3 WNK3 36 1.718 - - - 0.718 - 1.000 - - -
27. si:ch211-57i17.2 ENSDARG00000093354 58 1.713 0.854 - - - - - - 0.859 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
28. tfap2d ENSDARG00000023272 308 1.709 - - - 0.757 - - - - 0.952 transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
29. stap2a ENSDARG00000092810 591 1.707 - - - - - - - 0.972 0.735 signal transducing adaptor family member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5383]
30. cbln10 ENSDARG00000023157 17 1.702 0.702 - - - - 1.000 - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
31. wnt8b ENSDARG00000006911 98 1.692 - - - - - - - 0.897 0.795 wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
32. ZNF628 1104 1.688 - - - - - 0.800 - 0.888 - zinc finger protein 628, transcript variant X3
33. irx1a ENSDARG00000101831 644 1.678 - - - 0.865 - - - - 0.813 iroquois homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040707-1]
34. prmt3 ENSDARG00000019791 268 1.673 0.818 - - - - 0.855 - - - protein arginine methyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041105-1]
35. zic5 ENSDARG00000016022 1034 1.673 - - - 0.784 - - - 0.889 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
36. ctu2 ENSDARG00000051851 68 1.673 0.877 - - - - 0.796 - - - cytosolic thiouridylase subunit 2 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040801-79]
37. foxn4 ENSDARG00000010591 2332 1.667 - - 0.765 0.902 - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
38. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 1.667 - - - - - - - 0.921 0.746 BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
39. foxg1b ENSDARG00000032705 354 1.667 - - 0.831 - - - - 0.836 - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
40. gsx1 ENSDARG00000035735 1243 1.665 - - - - - - - 0.869 0.796 GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
41. celf4 ENSDARG00000070045 1537 1.664 - - 0.773 - 0.891 - - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
42. crmp1 ENSDARG00000056742 332 1.664 0.932 - - - - - - - 0.732 collapsin response mediator protein 1 [Source:ZFIN;Acc:ZDB-GENE-050720-1]
43. wu:fc51f04 wu:fc51f04 7074 1.663 - - - 0.892 - - - - 0.771
44. mab21l1 ENSDARG00000102047 4665 1.662 - - 0.710 0.952 - - - - - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
45. syt9a ENSDARG00000003994 298 1.651 - - - - - - - 0.923 0.728 synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
46. hs3st1l2 ENSDARG00000035578 279 1.645 - - - - - - - 0.896 0.749 heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
47. zic6 ENSDARG00000071496 402 1.642 - - - 0.715 - - - 0.927 - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
48. fabp7a ENSDARG00000007697 5211 1.634 - - 0.739 0.895 - - - - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
49. si:dkey-249p7.4 ENSDARG00000096663 9 1.631 0.929 - - - - 0.702 - - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
50. bcl11ab ENSDARG00000063153 3032 1.626 - - - 0.890 0.736 - - - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
51. tnnt2a ENSDARG00000020610 313 1.624 0.799 - 0.825 - - - - - - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
52. CABZ01028287.1 CABZ01028287.1 626 1.624 - - - - - - - 0.813 0.811
53. dlb ENSDARG00000004232 5120 1.622 - - - - - - - 0.902 0.720 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
54. dmbx1a ENSDARG00000009922 284 1.617 - - - 0.738 - - - - 0.879 diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
55. topbp1 ENSDARG00000059322 241 1.617 - - - - - 0.741 - 0.876 - DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
56. CABZ01066772.1 CABZ01066772.1 299 1.617 0.779 - - - - - - 0.838 -
57. pmelb ENSDARG00000033760 206 1.606 - - 0.803 - 0.803 - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
58. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 1.596 - - 0.744 - 0.852 - - - - ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
59. elovl4b ENSDARG00000027495 107 1.584 - - - 0.758 - - - 0.826 - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
60. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 1.581 - - - - - - - 0.753 0.828 solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
61. foxg1a ENSDARG00000070769 928 1.581 - - 0.713 - 0.868 - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
62. tbr1b ENSDARG00000004712 248 1.58 - - 0.727 - - - - - 0.853 T-box, brain, 1b [Source:ZFIN;Acc:ZDB-GENE-000323-1]
63. lhx9 ENSDARG00000056979 249 1.577 - - - - 0.753 - - - 0.824 LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
64. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.571 - - - - - - - 0.753 0.818 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
65. POLE4 ENSDARG00000013016 848 1.568 - - - 0.719 - - - 0.849 - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
66. nkx2.2a ENSDARG00000053298 747 1.564 - - - - 0.799 0.765 - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
67. prdm1b ENSDARG00000098925 440 1.557 - - 0.744 - 0.813 - - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
68. olig2 ENSDARG00000040946 1405 1.555 - - - - - 0.849 - 0.706 - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
69. vax2 ENSDARG00000058702 175 1.549 - - 0.702 - 0.847 - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
70. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.547 - - 0.763 - 0.784 - - - -
71. cul5b ENSDARG00000004260 9 1.543 - - - - - 0.746 - - 0.797 cullin 5b [Source:ZFIN;Acc:ZDB-GENE-091113-45]
72. cuedc2 ENSDARG00000039365 484 1.54 - - - 0.702 - - - 0.838 - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
73. pou3f2a ENSDARG00000070220 817 1.54 - - - 0.780 - - - - 0.760 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
74. SENP1 SENP1 1122 1.537 - - - 0.705 - - - 0.832 -
75. pcp4l1 ENSDARG00000023181 117 1.536 0.710 - - - - - - 0.826 - Purkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
76. defbl1 ENSDARG00000075161 211 1.535 - - 0.714 0.821 - - - - - defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
77. trmt1 ENSDARG00000010978 72 1.516 0.799 - - 0.717 - - - - - tRNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060810-40]
78. dbx1a ENSDARG00000086393 3161 1.515 - - - 0.774 - - - 0.741 - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
79. pou3f3a ENSDARG00000042032 2835 1.505 - - - 0.723 - - - - 0.782 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
80. sox2 ENSDARG00000070913 2763 1.501 - - 0.739 0.762 - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
81. sfrp5 ENSDARG00000039041 1777 1.492 - - 0.762 - 0.730 - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
82. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 1.484 - - 0.703 - - - - - 0.781 transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
83. wu:fq41a10 wu:fq41a10 7009 1.448 - - - 0.734 - - - 0.714 -
84. ephb2b ENSDARG00000021539 521 1.442 0.722 - - 0.720 - - - - - eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
85. negr1 ENSDARG00000021607 1051 1.44 - - - 0.727 - - - 0.713 - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
86. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1.438 - - 0.712 0.726 - - - - - solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
87. pcdh19 ENSDARG00000034344 2378 1.436 - - - 0.713 - - - - 0.723 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
88. SLC38A8 SLC38A8 17 1 1.000 - - - - - - - -
89. CU681842.2 CU681842.2 1 1 - - - - - 1.000 - - -
90. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 1.000 - - - - - - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
91. CT027762.3_1 CT027762.3_1 62 1 1.000 - - - - - - - -
92. si:dkey-37o8.1 ENSDARG00000071727 64 1 1.000 - - - - - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
93. BX323793.4 BX323793.4 8 1 - - - - - 1.000 - - -
94. zp2l1 ENSDARG00000055415, ENSDARG00000110573 2 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, like 1 [Source:ZFIN;Acc:ZDB-GENE-060818-3]
95. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1 - - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
96. si:rp71-23d18.4 ENSDARG00000092779 1 1 - - - - - 1.000 - - - si:rp71-23d18.4 [Source:ZFIN;Acc:ZDB-GENE-050208-761]
97. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
98. C3H16orf89 C3H16orf89 449 1 1.000 - - - - - - - -
99. ft2 ENSDARG00000109567 5 1 1.000 - - - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
100. si:ch211-171b20.3 ENSDARG00000094794 2 1 1.000 - - - - - - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]

There are 1324 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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